Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STAP2 Gene 0 21.15 9.05 24.55 16.05 6.84 8.65 7.65 13.68 5.50 7.77 1.67 9.05 6.87 10.64 17.74 9.97 9.98 13.30 18.09 17.24 7.46 6.58 15.70 2 314714 Transcript 0 18.50 19.76 13.69 18.19 7.38 3.98 16.16 18.38 9.63 12.86 3.10 9.47 17.92 10.80 19.35 17.00 10.67 21.46 18.65 24.30 5.11 7.30 20.58 3 424810 Transcript 0 6.96 0.00 4.23 2.06 3.90 0.00 3.71 7.80 3.12 1.26 0.00 5.85 0.00 16.60 4.45 7.09 8.79 2.45 0.00 3.26 0.00 5.63 22.37 4 IG6 Intergenic 0 3.24 7.45 32.49 15.87 3.88 3.56 3.94 6.27 2.46 5.89 1.58 2.50 0.42 0.73 1.97 1.95 0.63 17.92 19.68 18.14 1.87 0.68 2.01 5 IG6_SR2 SilentIntergenicRegion 0 1.86 5.78 37.62 13.56 1.41 4.12 1.55 3.24 2.16 4.23 1.74 0.49 0.53 1.07 2.58 3.69 0.99 22.27 27.61 20.20 2.92 1.44 1.21 6 IG6_AR2 ActiveIntergenicRegion 0 4.08 7.18 35.04 16.77 6.62 3.13 4.36 8.00 3.10 6.29 1.61 4.00 0.00 0.37 0.95 0.19 0.00 18.81 8.62 14.21 0.92 0.00 2.86 7 IG6_SR1 SilentIntergenicRegion 0 4.37 9.75 27.58 18.80 5.65 3.67 7.06 9.70 2.80 7.99 1.70 4.47 0.62 0.65 2.11 1.32 0.53 14.61 17.80 19.02 1.54 0.00 2.13 8 IG6_AR1 ActiveIntergenicRegion 0 4.37 8.70 25.89 16.49 1.99 1.24 1.51 2.38 1.01 5.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.72 18.67 17.16 0.12 2.29 4.83 9 ER1a ExonRegion 0 11.37 6.29 25.49 13.72 0.69 5.17 5.12 7.56 2.19 3.03 0.47 0.04 0.99 5.64 8.12 2.85 4.31 14.63 13.57 17.30 5.40 3.38 14.86 10 E1_Da NovelBoundary 0 0.00 23.29 29.12 18.71 0.00 0.00 4.50 2.30 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.01 36.05 5.88 0.00 2.63 0.00 11 E1a_E2a KnownJunction 0 7.56 0.00 4.70 0.00 0.00 0.00 0.00 13.97 1.79 4.73 0.00 0.00 0.00 2.47 4.45 12.65 0.00 3.65 4.80 3.00 8.65 5.69 45.84 12 I1 Intron 0 5.14 10.21 22.86 19.29 3.47 4.26 2.79 4.31 2.38 4.43 0.31 3.55 5.69 0.78 2.07 1.12 1.60 14.13 23.55 31.23 0.71 1.35 3.01 13 I1_SR1 SilentIntronRegion 0 1.35 6.37 22.54 15.91 3.17 1.69 0.61 2.96 3.14 4.22 0.41 1.55 0.00 0.81 2.16 0.00 2.27 11.43 27.59 23.43 0.50 0.89 2.84 14 I1_AR1 ActiveIntronRegion 0 0.30 13.62 48.72 52.47 8.94 4.47 5.27 9.99 6.82 9.38 0.00 12.12 1.97 0.13 3.89 0.00 5.81 36.44 25.10 53.66 6.43 2.54 4.35 15 I1_SR2 SilentIntronRegion 0 6.92 11.39 21.06 18.05 3.17 5.20 3.41 4.38 1.77 4.14 0.30 3.63 8.08 0.82 1.91 1.62 1.04 13.45 22.02 32.48 0.35 1.43 2.98 16 E2_Aa NovelBoundary 0 29.78 42.16 88.79 49.94 15.37 18.46 2.25 19.88 6.39 13.67 0.00 0.00 12.66 2.47 8.90 8.72 0.00 41.25 50.35 67.88 6.30 2.57 0.00 17 ER2a ExonRegion 0 18.84 18.67 18.41 12.70 3.23 2.83 7.34 14.00 3.41 4.17 0.08 12.33 0.00 14.66 13.02 12.96 13.20 5.77 22.16 31.94 9.30 9.84 21.33 18 E2_Da NovelBoundary 0 42.75 19.93 179.06 74.75 12.05 34.58 23.19 17.58 10.16 12.46 0.00 19.36 6.82 2.47 13.35 11.19 3.93 79.01 45.37 67.50 5.56 2.45 4.10 19 E2a_E3a KnownJunction 0 3.33 0.00 5.80 1.60 14.60 0.00 1.63 16.18 4.66 4.67 0.00 30.61 0.00 17.07 9.64 11.54 16.46 0.00 4.80 3.26 14.64 0.00 0.00 20 I2 Intron 0 12.45 21.27 60.29 40.50 8.75 16.19 9.96 8.42 3.01 7.82 0.63 4.00 8.84 1.75 3.68 0.97 1.08 37.24 32.28 52.17 0.00 1.36 1.92 21 I2_SR1 SilentIntronRegion 0 12.87 21.84 62.24 41.78 9.02 16.72 10.23 8.70 3.11 8.08 0.65 4.13 9.13 1.81 3.79 1.00 1.11 38.30 33.27 53.81 0.00 1.41 1.98 22 E3_Aa NovelBoundary 0 14.22 55.25 141.39 81.87 7.81 15.16 37.94 11.17 4.66 8.84 0.00 0.00 6.82 4.83 4.45 3.76 7.76 25.16 9.60 66.54 0.00 6.00 8.11 23 ER3a ExonRegion 0 17.55 24.35 63.45 35.39 7.46 21.35 7.43 23.79 8.20 12.03 0.80 18.83 10.56 10.63 19.44 13.10 10.90 27.94 31.10 53.87 11.04 6.56 9.93 24 E3_Da NovelBoundary 0 3.78 26.71 111.05 53.41 4.33 21.98 7.82 6.49 5.58 8.78 0.00 7.20 14.77 0.00 0.00 7.86 0.00 28.44 44.99 72.23 0.00 2.88 4.18 25 E3a_E4a KnownJunction 0 10.82 0.00 0.00 2.06 12.39 12.38 3.89 13.55 2.98 1.64 0.00 0.00 6.82 9.12 0.00 7.78 11.69 0.00 0.00 0.00 18.97 3.06 4.18 26 E4_Aa NovelBoundary 0 0.00 6.05 19.60 18.61 0.00 2.44 7.46 2.22 1.42 1.48 0.00 0.00 0.00 0.00 0.00 8.54 0.00 8.37 13.08 0.00 2.35 0.00 0.00 27 ER4a ExonRegion 0 11.25 0.14 5.48 1.89 3.76 15.19 3.90 11.43 3.77 4.57 0.00 9.27 2.88 14.70 11.05 6.83 12.22 0.49 0.17 3.92 15.66 3.07 4.89 28 E4_Da NovelBoundary 0 2.96 5.00 34.86 42.52 10.27 0.00 7.33 6.37 0.00 3.01 0.00 0.00 0.00 0.00 0.00 3.25 0.00 11.69 4.52 5.82 0.00 0.00 0.00 29 E4a_E5a KnownJunction 0 9.85 0.00 6.18 2.73 0.00 8.57 3.36 7.68 3.01 5.29 0.00 7.65 0.00 9.54 4.45 18.03 3.83 0.00 0.00 0.00 5.13 2.39 0.00 30 I4 Intron 0 1.51 5.57 15.45 10.89 1.28 5.02 4.58 0.61 2.63 2.65 0.23 2.97 0.92 0.96 2.58 2.12 0.39 9.20 10.63 9.89 0.00 0.25 0.00 31 I4_SR1 SilentIntronRegion 0 1.52 5.61 15.55 10.96 1.28 5.06 4.61 0.62 2.65 2.66 0.23 2.99 0.93 0.96 2.60 2.14 0.40 9.26 10.70 9.96 0.00 0.25 0.00 32 E5_Aa NovelBoundary 0 7.41 2.57 30.84 40.25 0.00 2.33 4.24 8.13 1.74 3.84 2.68 5.85 6.82 5.18 4.45 7.35 0.00 12.73 4.80 20.71 0.00 0.00 0.00 33 ER5a ExonRegion 0 27.18 1.03 21.43 8.34 1.35 5.21 4.08 3.46 4.46 3.19 1.72 4.16 3.90 9.79 10.63 9.03 12.81 5.05 7.29 14.58 3.21 5.36 13.58 34 E5_Da NovelBoundary 0 3.04 3.35 14.52 16.25 0.00 2.16 0.00 0.00 2.58 2.23 1.95 6.00 0.00 0.00 0.00 7.78 0.00 7.63 4.80 8.63 0.00 3.06 0.00 35 E5a_E6a KnownJunction 0 23.04 0.00 1.60 10.69 3.31 2.27 4.33 6.65 2.69 3.36 0.00 6.30 0.00 2.41 4.45 0.00 8.32 0.00 7.72 2.88 8.03 5.63 19.63 36 I5 Intron 0 9.16 7.50 42.10 22.47 1.71 5.85 4.60 5.66 1.57 5.46 1.23 5.17 1.92 2.25 5.48 2.74 0.94 28.79 26.89 29.28 0.93 0.59 3.75 37 I5_SR1 SilentIntronRegion 0 9.35 9.34 45.60 21.39 2.04 6.86 5.56 5.41 1.41 4.73 1.29 6.96 2.58 2.66 5.26 2.55 0.98 24.49 22.56 32.11 1.05 0.60 3.09 38 I5_AR1 ActiveIntronRegion 0 8.69 2.21 32.34 25.87 0.75 2.99 1.84 6.46 2.05 7.62 1.08 0.00 0.00 1.06 6.18 3.31 0.81 41.66 39.83 21.33 0.61 0.58 5.73 39 E6_Aa NovelBoundary 0 0.00 5.33 16.32 2.80 3.65 13.51 0.00 2.01 1.65 3.60 4.90 0.00 0.00 2.59 0.00 4.27 0.00 6.80 7.72 4.92 2.59 0.00 0.00 40 ER6a ExonRegion 0 12.68 6.15 27.91 18.25 8.09 10.76 6.25 10.49 3.08 9.28 2.16 3.91 4.59 8.99 18.01 6.67 4.72 34.40 35.56 17.82 5.19 5.09 18.05 41 E6a_E7a KnownJunction 0 17.04 0.00 6.09 10.79 0.00 2.73 3.44 9.90 9.52 4.81 2.42 0.00 6.33 14.95 10.75 7.86 4.77 0.00 0.00 2.94 8.77 2.45 15.19 42 ER7a ExonRegion 0 18.50 1.48 16.60 13.51 3.25 6.97 3.84 14.72 4.23 6.18 1.79 2.91 2.41 11.69 7.50 10.53 4.95 3.01 21.57 7.63 9.38 8.04 16.99 43 E7a_E8a KnownJunction 0 19.41 0.00 31.64 19.71 4.33 7.84 1.63 26.16 4.69 4.84 0.00 0.00 0.00 0.00 4.45 3.59 4.68 4.39 0.00 5.05 3.15 8.76 8.37 44 ER8a ExonRegion 0 31.56 2.45 27.07 23.04 5.07 15.85 4.90 13.53 6.58 5.51 1.91 15.80 5.74 10.45 33.15 5.11 13.04 5.08 16.30 7.25 6.65 5.44 23.21 45 E8a_E9a KnownJunction 0 64.31 3.35 13.31 20.21 18.68 8.12 11.39 9.78 6.34 5.88 0.00 0.00 0.00 14.24 24.60 13.07 15.90 6.22 17.41 5.18 14.70 3.06 20.32 46 ER9a ExonRegion 0 30.50 2.46 16.78 13.07 10.18 12.48 3.31 8.54 4.29 6.10 0.06 9.97 4.55 6.50 15.56 12.02 13.45 3.08 20.27 4.87 10.28 4.99 10.14 47 E9a_E10a KnownJunction 0 45.93 0.00 24.22 9.19 14.35 13.12 1.99 10.31 1.16 4.97 0.00 26.86 6.82 7.00 20.15 20.17 8.88 0.00 0.00 9.65 2.84 11.88 11.44 48 ER10a ExonRegion 0 25.64 1.56 21.55 11.83 5.35 7.58 7.74 14.81 4.78 4.45 1.61 11.92 4.56 11.87 28.24 11.39 10.89 1.27 10.51 5.42 10.53 8.85 14.92 49 E10a_E11a KnownJunction 0 13.71 2.89 15.79 12.92 15.45 2.61 0.00 16.14 4.95 4.19 2.53 25.96 0.00 11.12 14.09 11.62 4.49 2.11 4.33 0.00 7.97 0.00 15.71 50 ER11a ExonRegion 0 5.96 8.72 23.11 13.28 21.15 4.75 5.41 16.43 3.84 5.62 2.66 11.78 3.93 10.74 18.84 11.41 12.78 2.96 4.69 5.95 7.06 8.80 17.56 51 E11a_E12a KnownJunction 0 0.00 8.88 1.83 5.23 0.00 0.00 3.84 6.74 0.00 0.00 0.00 0.00 0.00 0.00 4.45 4.61 4.77 0.00 4.80 3.26 3.15 2.39 8.37 52 E11a_E12b KnownJunction 0 6.96 0.00 4.23 2.06 3.90 0.00 3.71 7.80 3.12 1.26 0.00 5.85 0.00 16.60 4.45 7.09 8.79 2.45 0.00 3.26 0.00 5.63 22.37 53 E12_Aa NovelBoundary 0 387.03 296.33 183.91 149.50 327.76 206.02 347.12 243.12 169.21 224.03 107.08 45.76 51.94 38.67 61.31 284.03 236.47 262.98 167.63 248.45 162.54 58.85 246.87 54 ER12a ExonRegion 0 37.00 30.64 25.54 31.15 14.76 7.96 28.48 30.03 19.26 25.72 6.20 18.94 35.83 21.60 34.25 29.38 16.58 42.92 32.50 45.34 7.07 12.22 32.79 55 E12_Ab KnownBoundary 0 3.56 2.63 6.39 8.36 0.00 2.27 2.03 8.26 5.38 0.00 2.42 5.40 0.00 4.53 4.45 8.72 7.67 6.63 15.91 9.27 5.44 2.63 6.83 56 ER12b ExonRegion 0 4.95 2.89 14.57 6.98 0.51 5.25 1.65 11.47 6.99 4.80 3.03 3.45 2.66 10.86 19.80 2.41 7.98 3.62 25.53 5.46 8.04 8.28 12.82 57 E12a_E13a KnownJunction 0 3.11 0.00 6.80 3.30 0.00 0.00 0.00 10.97 2.92 3.89 0.00 0.00 0.00 0.00 4.45 4.19 21.88 0.00 13.18 0.00 11.68 5.76 4.27 58 E13_Aa NovelBoundary 0 0.00 6.31 4.55 2.06 0.00 2.50 2.25 8.01 1.53 16.12 0.00 0.00 0.00 2.41 0.00 0.00 0.00 18.28 4.80 3.07 0.00 3.12 0.00 59 ER13a ExonRegion 0 33.41 8.69 14.29 7.86 9.75 3.64 7.02 9.14 0.97 7.79 0.00 6.16 3.84 5.92 6.44 5.91 8.12 5.47 7.65 2.18 3.92 3.91 4.50