Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CHAF1A	Gene	0	42.30	75.95	150.12	65.93	60.78	28.87	104.27	109.79	37.71	151.72	234.17	100.47	53.75	244.87	209.18	202.73	204.76	284.87	73.67	163.01	18.88	27.34	19.62
2	344143	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	301280	Transcript	1	41.93	63.83	152.88	60.23	41.89	26.84	73.15	90.96	39.95	135.79	191.35	37.02	20.83	165.38	215.00	151.88	147.25	263.07	51.98	135.36	13.96	22.42	12.97
4	ER1a	ExonRegion	1	12.20	20.05	19.29	4.85	9.72	1.86	22.80	10.09	3.17	17.20	55.37	7.15	1.88	27.39	38.54	36.13	40.65	18.82	8.80	21.72	1.64	4.70	4.97
5	E1a_E2a	KnownJunction	0	12.22	44.73	47.69	15.85	3.40	0.00	41.38	30.81	9.40	39.30	108.76	29.86	12.50	60.75	51.18	71.61	69.28	57.25	19.95	56.69	5.07	8.39	7.85
6	E1a_E3a	NovelJunction	0	0.00	0.00	1.83	2.03	0.00	0.00	6.27	2.30	0.00	1.61	11.58	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	7.80	0.00	2.33	0.00
7	E1a_E4a	NovelJunction	0	3.41	0.00	1.24	0.00	0.00	0.00	0.00	0.00	3.04	0.00	11.95	0.00	0.00	2.94	5.93	4.02	4.02	1.91	0.00	0.00	3.15	0.00	0.00
8	ER2a	ExonRegion	0	4.19	53.15	57.69	19.94	28.17	8.81	67.11	50.77	19.86	71.60	206.90	54.25	45.43	169.45	104.96	153.79	132.68	157.60	88.19	118.40	3.20	15.65	24.24
9	E2a_E3a	KnownJunction	0	5.93	101.30	72.00	27.64	57.89	8.18	109.13	73.69	24.65	98.91	225.79	97.83	26.13	235.98	202.86	241.56	132.49	227.70	111.72	140.17	5.99	7.90	28.17
10	E2a_E4a	NovelJunction	0	0.00	0.00	1.83	0.00	0.00	2.84	0.00	0.00	0.00	2.93	2.68	5.55	0.00	2.35	24.60	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00
11	ER3a	ExonRegion	0	43.00	92.81	160.41	74.06	70.89	30.40	129.88	135.40	46.86	195.85	284.13	151.61	94.28	308.93	224.60	244.33	272.79	311.92	94.05	214.30	21.90	33.72	24.67
12	E3a_E4a	KnownJunction	0	53.05	82.95	94.50	44.12	68.17	42.87	130.46	109.50	30.21	115.43	206.05	68.57	74.35	274.36	186.41	107.75	159.05	184.30	73.98	172.26	16.56	11.14	19.72
13	E3a_E5a	NovelJunction	0	0.00	6.58	15.05	6.93	4.33	0.00	8.30	2.05	0.00	6.63	2.68	6.30	6.66	2.18	0.00	0.00	0.00	29.18	0.00	3.26	0.00	0.00	0.00
14	E4_Aa	NovelBoundary	0	3.78	12.56	33.80	32.16	7.81	8.69	6.23	26.08	2.55	31.94	5.16	11.70	0.00	0.00	0.00	12.56	13.56	12.89	3.48	34.45	0.00	0.00	0.00
15	ER4a	ExonRegion	0	54.62	86.66	83.84	48.61	81.77	32.08	173.86	88.67	27.69	117.37	227.13	120.77	74.88	295.96	176.82	134.63	194.17	204.10	55.10	180.74	15.46	17.58	18.29
16	E4_Da	NovelBoundary	0	24.23	37.62	32.55	28.57	20.29	2.90	27.73	41.85	3.41	31.11	6.63	41.71	0.00	7.00	10.75	8.37	4.49	19.57	8.94	20.90	0.00	0.00	0.00
17	E4a_E5a	KnownJunction	0	80.38	112.48	86.37	50.24	132.77	29.19	231.19	68.02	32.35	138.26	197.37	149.00	75.00	260.88	196.06	165.34	176.44	231.35	59.95	158.71	10.38	22.72	35.17
18	ER5a	ExonRegion	0	49.20	95.26	155.56	63.68	99.39	44.96	146.13	103.53	28.44	128.91	219.01	176.38	98.96	288.22	223.01	230.43	225.35	277.54	87.60	183.43	16.63	30.16	23.31
19	E5a_E6a	KnownJunction	1	54.23	96.96	194.02	93.03	72.92	36.29	125.11	221.92	37.12	190.29	289.13	212.92	40.58	303.43	205.33	244.38	323.05	284.99	79.63	188.68	20.88	37.35	32.18
20	ER6a	ExonRegion	0	59.61	107.15	192.28	78.11	132.78	46.15	229.18	189.05	54.53	189.69	373.65	251.89	74.50	393.14	234.19	300.33	372.95	327.14	92.01	215.73	30.92	47.41	29.99
21	E6a_E7a	KnownJunction	0	87.65	111.89	217.26	71.82	209.68	64.85	384.70	148.73	73.18	194.78	391.78	248.03	90.58	497.09	269.49	303.25	375.50	415.86	127.63	259.44	28.05	35.33	16.99
22	ER7a	ExonRegion	0	57.64	108.43	218.74	103.50	129.44	37.98	212.28	168.39	51.61	201.97	295.73	246.34	75.72	361.07	229.79	362.64	297.03	531.56	135.91	193.18	18.04	53.21	27.62
23	E7a_E8a	KnownJunction	0	64.01	149.51	213.56	124.73	175.64	65.30	217.55	230.06	49.28	210.44	220.53	246.53	73.21	342.99	267.01	383.32	305.38	587.19	257.98	146.50	24.71	59.34	49.25
24	ER8a	ExonRegion	0	45.44	92.96	140.38	62.20	72.15	39.14	116.77	122.24	35.82	155.27	262.47	143.31	46.14	289.66	180.08	229.36	217.98	355.53	83.86	143.87	28.71	28.88	23.01
25	E8a_E9a	KnownJunction	1	83.27	121.75	162.74	74.32	98.81	47.13	202.22	110.41	40.60	145.89	226.53	48.32	13.47	273.59	151.55	212.00	158.02	293.08	38.40	144.96	15.94	17.57	11.44
26	ER9a	ExonRegion	0	46.43	73.99	171.12	73.77	47.42	32.59	114.02	116.15	36.94	150.79	234.92	72.17	47.51	304.35	233.32	214.84	182.10	349.52	60.14	162.15	25.28	25.22	24.38
27	E9a_E10a	KnownJunction	1	45.27	48.08	194.76	71.52	34.21	32.99	88.99	111.23	48.78	131.09	243.43	69.02	0.00	205.13	197.54	170.30	207.20	308.04	57.23	130.71	27.06	15.19	23.30
28	ER10a	ExonRegion	0	45.26	72.15	176.17	86.87	43.97	26.10	91.78	120.56	51.43	155.87	288.67	101.13	27.79	321.01	254.95	256.56	253.64	414.90	93.52	179.01	31.94	30.22	9.90
29	E10a_E11a	KnownJunction	1	64.46	89.66	222.67	122.13	51.02	37.76	131.96	138.30	51.85	211.83	297.92	121.39	12.34	326.92	300.39	302.06	321.55	467.47	88.10	214.06	50.47	37.35	15.54
30	ER11a	ExonRegion	0	55.35	86.09	203.91	92.68	45.26	26.26	117.33	129.78	47.62	198.22	368.93	87.75	48.11	296.55	319.57	276.15	271.53	460.75	77.89	206.50	25.92	33.92	23.71
31	E11a_E12a	KnownJunction	1	33.56	118.79	257.71	96.56	68.00	25.78	126.61	155.42	56.65	211.05	359.20	68.42	29.38	271.12	338.84	304.19	249.46	482.68	79.91	207.35	11.12	25.35	30.82
32	ER12a	ExonRegion	0	34.00	66.13	240.72	112.06	41.50	27.70	97.15	127.94	49.93	201.61	328.80	90.43	39.23	251.99	307.13	263.25	229.23	446.64	82.48	196.31	29.66	33.04	25.74
33	E12_Da	KnownBoundary	0	39.64	73.21	315.84	148.00	40.15	19.08	109.26	194.49	61.54	227.60	266.65	105.18	62.17	248.40	347.49	314.62	144.93	672.00	69.37	189.00	27.49	67.66	26.12
34	E12a_E15b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER12b	ExonRegion	0	41.33	61.22	257.75	97.13	38.87	23.86	71.77	133.25	53.79	195.87	316.38	59.61	35.48	243.35	316.68	263.45	199.28	484.84	96.95	160.91	23.56	36.70	18.22
36	E12b_E13a	KnownJunction	1	51.86	76.50	192.69	78.41	29.80	29.30	101.57	102.19	50.66	163.56	289.44	36.46	39.77	175.76	284.32	195.76	226.27	324.04	56.85	158.13	32.31	36.43	10.07
37	ER13a	ExonRegion	0	43.49	63.03	129.82	55.11	32.76	25.38	74.44	84.66	30.57	125.15	197.17	39.04	27.39	207.22	221.12	151.45	155.71	254.71	52.52	134.78	14.88	18.21	12.45
38	E13a_E14a	KnownJunction	1	60.97	88.08	128.11	61.23	45.42	34.18	116.85	78.74	53.82	124.34	190.26	46.22	6.82	188.95	236.48	184.40	143.52	344.23	29.84	169.83	5.75	11.33	12.12
39	I13_AR2	ActiveIntronRegion	0	7.50	5.50	11.03	17.15	3.60	1.43	19.83	7.49	3.20	18.22	2.36	6.52	0.00	5.01	4.26	20.40	20.70	37.46	9.48	22.09	0.00	4.22	3.48
40	ER14a	ExonRegion	1	35.76	53.69	132.33	49.79	55.06	30.74	91.26	77.69	41.03	117.75	171.73	33.61	14.07	171.65	229.32	141.71	130.71	234.99	41.08	165.52	14.88	26.55	13.71
41	E14_Da	NovelBoundary	0	6.59	6.05	22.21	9.36	8.06	29.76	6.49	16.39	4.86	27.88	24.32	6.15	0.00	14.42	25.09	49.90	30.11	94.85	17.79	46.34	6.30	2.69	4.35
42	E14a_E15a	KnownJunction	1	17.04	60.12	145.68	41.22	33.62	27.03	44.03	70.15	32.00	131.49	117.66	6.90	6.82	80.58	116.32	31.02	91.82	168.76	35.58	88.08	3.15	17.64	4.27
43	E15_Aa	NovelBoundary	0	3.56	9.14	35.16	2.06	16.47	18.63	12.14	27.23	6.48	28.34	9.95	0.00	5.68	19.54	34.98	46.23	21.22	67.86	9.32	39.76	0.00	0.00	0.00
44	ER15a	ExonRegion	1	35.47	48.22	138.54	52.40	32.43	22.16	32.21	105.83	34.14	136.84	146.90	36.62	11.98	156.70	216.55	133.92	114.86	187.71	46.44	122.02	8.84	15.44	19.32
45	E15_Ab	KnownBoundary	1	43.34	94.33	161.20	86.54	11.63	16.47	40.59	97.88	47.63	170.30	150.78	51.17	19.80	201.01	77.63	215.50	140.81	297.64	90.36	145.99	20.26	40.54	36.54
46	ER15b	ExonRegion	0	33.22	72.86	185.34	70.27	90.14	30.64	86.10	133.48	48.12	183.00	205.88	46.77	22.56	171.54	191.70	183.61	187.52	182.24	62.42	162.74	14.84	35.51	12.64
47	E15_Da	KnownBoundary	0	45.49	60.91	153.75	59.27	138.62	44.12	70.66	131.15	45.17	152.76	141.56	84.18	41.56	115.37	159.71	197.47	155.68	215.81	44.42	200.25	15.69	20.39	11.78
48	ER15c	ExonRegion	0	49.53	59.78	98.11	46.56	67.16	22.06	53.05	75.15	23.62	91.32	101.24	37.68	24.32	98.81	99.24	113.31	115.85	105.30	56.63	83.60	8.32	17.08	13.61
49	IG9	Intergenic	0	2.88	5.03	13.79	3.27	5.74	2.04	7.87	18.49	9.34	22.99	7.02	4.06	3.96	11.08	8.14	15.45	17.84	46.80	6.97	29.14	2.09	2.58	2.91
50	IG9_SR1	SilentIntergenicRegion	0	2.84	5.68	13.44	2.84	5.32	1.68	7.90	17.30	9.59	23.88	7.48	3.20	2.49	10.15	7.80	14.38	17.56	45.25	7.70	28.47	1.30	2.91	3.00
51	IG9_AR1	ActiveIntergenicRegion	0	1.74	2.12	10.06	4.24	9.48	2.66	8.10	20.42	8.16	15.42	5.37	3.08	9.10	14.38	8.46	17.68	16.31	40.81	5.67	28.98	4.84	1.41	4.95
52	IG9_AR2	ActiveIntergenicRegion	0	3.96	3.44	18.57	5.02	5.38	3.72	7.65	24.01	8.86	23.51	5.63	9.76	8.50	14.21	10.00	20.25	20.83	60.33	3.71	33.53	4.67	1.54	0.96