Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C19orf28	Gene	0	37.84	17.95	87.84	37.64	23.58	28.89	20.86	54.77	58.58	50.25	72.75	32.09	33.11	98.17	138.76	122.59	80.09	96.57	81.90	58.29	108.02	88.18	125.42
2	355415	Transcript	0	38.55	3.03	43.09	12.58	13.91	16.68	11.39	27.56	36.58	28.51	47.39	24.35	21.18	59.61	103.51	93.58	81.47	46.67	48.32	15.48	68.16	53.23	70.12
3	398558	Transcript	0	24.65	18.00	38.85	21.54	21.37	18.06	20.21	30.58	35.76	28.43	9.20	9.88	15.67	25.77	38.05	29.26	19.18	72.36	41.96	36.87	29.44	29.47	44.57
4	442407	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	389395	Transcript	0	60.78	25.60	115.51	58.78	51.44	47.26	33.79	69.73	86.17	61.68	37.48	15.27	9.88	54.15	108.51	71.18	58.61	120.70	77.96	69.40	72.95	81.23	96.46
6	ER1a	ExonRegion	0	7.44	3.49	32.33	11.03	4.92	8.92	2.77	19.34	15.38	24.14	50.54	20.95	19.12	64.64	75.29	85.43	49.54	54.52	55.43	23.75	69.47	41.94	81.97
7	E1a_E2a	KnownJunction	0	21.63	21.18	108.90	43.78	12.31	10.11	6.76	66.09	47.63	75.97	133.67	37.51	46.59	158.46	209.53	228.83	127.63	136.92	138.45	63.60	209.73	210.52	150.24
8	E2_Aa	NovelBoundary	0	3.41	0.00	9.85	15.88	0.00	0.00	0.00	16.22	7.55	1.45	0.00	0.00	0.00	2.41	10.26	0.00	4.77	13.35	9.51	6.26	0.00	0.00	4.27
9	ER2a	ExonRegion	0	26.20	15.42	121.57	45.25	14.61	34.23	16.04	76.22	66.30	80.21	144.85	54.09	60.59	174.14	224.54	207.54	117.17	129.12	113.68	77.90	211.49	128.62	160.26
10	E2a_E3a	KnownJunction	0	31.41	9.34	137.07	44.82	7.98	28.62	12.45	85.11	78.41	78.62	151.20	31.36	72.88	160.63	160.08	227.72	127.63	167.60	137.42	84.56	234.01	123.81	274.53
11	E2a_E4a	NovelJunction	0	3.78	0.00	1.27	0.00	0.00	0.00	0.00	4.72	3.36	0.00	0.00	0.00	0.00	0.00	12.61	0.00	0.00	2.28	0.00	3.26	0.00	0.00	0.00
12	E3_Aa	NovelBoundary	0	3.48	2.70	12.39	14.18	0.00	8.57	2.21	17.62	8.13	5.53	0.00	0.00	0.00	7.42	4.33	8.63	0.00	9.99	0.00	6.01	2.84	0.00	3.59
13	ER3a	ExonRegion	0	16.65	14.95	108.76	41.09	12.53	28.08	20.22	49.78	63.91	58.52	112.16	47.15	48.06	170.52	215.43	160.80	135.84	100.29	101.23	71.91	176.49	125.63	167.35
14	E3a_E4a	KnownJunction	0	30.97	20.33	107.86	48.98	32.34	30.38	20.89	64.28	77.46	49.26	120.98	23.71	27.27	168.29	162.31	198.75	92.29	86.93	111.91	69.80	156.42	136.18	151.01
15	ER4a	ExonRegion	0	35.51	17.58	135.34	49.67	18.06	29.74	26.51	70.30	70.17	68.51	122.34	47.22	32.32	192.18	236.51	216.54	136.31	121.56	136.14	73.69	168.76	151.89	228.91
16	E4a_E5a	KnownJunction	0	26.75	23.15	162.53	50.44	16.13	36.23	28.31	72.08	88.08	77.74	122.61	30.91	33.44	184.12	229.93	238.74	125.48	79.59	91.20	88.33	198.18	156.15	232.27
17	Ix	Intron	0	2.52	1.38	10.24	4.49	3.18	0.31	2.93	5.25	7.20	4.65	7.23	4.24	2.63	11.68	19.84	19.71	12.91	20.76	15.16	5.79	3.37	7.44	13.98
18	Ix_SR1	SilentIntronRegion	0	2.54	1.39	10.31	4.52	3.21	0.31	2.95	5.29	7.24	4.68	7.28	4.27	2.63	11.76	19.98	19.83	12.98	20.90	15.26	5.83	3.39	7.49	14.07
19	E5_Aa	NovelBoundary	0	0.00	0.00	17.56	24.97	0.00	5.79	4.20	9.32	19.85	7.55	0.00	0.00	13.15	11.95	18.42	19.99	8.70	21.72	16.38	8.63	0.00	14.94	4.35
20	ER5a	ExonRegion	0	71.55	30.18	206.40	77.57	26.24	51.80	32.91	98.74	110.75	86.07	222.66	81.47	71.51	229.49	273.59	336.27	164.26	163.91	196.23	116.29	251.32	185.39	299.13
21	E5a_E6a	KnownJunction	0	131.58	51.90	222.23	89.30	23.43	40.32	46.15	111.15	110.36	96.62	229.22	98.13	105.51	208.61	347.24	376.57	140.16	198.11	223.16	111.34	293.01	171.45	372.87
22	ER6a	ExonRegion	0	87.71	32.32	162.34	62.63	33.84	32.42	30.51	99.12	87.87	68.73	194.10	82.59	83.36	199.77	296.68	279.57	193.69	131.01	158.79	103.04	242.22	180.53	298.50
23	E6a_E7a	KnownJunction	0	110.54	31.31	155.02	57.57	31.83	29.53	35.20	100.71	87.82	58.85	199.31	100.23	100.16	187.36	301.75	349.82	237.12	104.34	195.30	69.48	271.08	180.27	314.14
24	E6a_E8a	NovelJunction	0	14.15	5.46	20.43	9.62	0.00	0.00	4.02	1.77	12.64	9.40	2.68	0.00	6.17	2.47	4.45	28.03	4.02	2.57	13.93	0.00	8.71	11.14	0.00
25	E6a_E9a	NovelJunction	0	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	11.54	9.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E6a_E12a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.94	15.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	Ix	Intron	0	6.91	1.71	8.68	5.87	4.74	5.81	3.70	6.72	12.18	8.76	4.69	5.34	3.96	21.44	23.14	9.70	4.92	16.79	8.91	7.93	8.01	8.16	11.23
28	Ix_AR1	ActiveIntronRegion	0	6.35	2.03	3.68	2.73	5.35	11.92	3.97	6.63	10.60	3.44	7.73	0.00	3.13	25.44	43.52	10.40	9.90	9.24	6.37	7.62	11.02	4.17	29.37
29	Ix_SR1	SilentIntronRegion	0	7.51	1.74	9.92	6.93	5.37	5.05	3.55	7.12	13.30	9.80	5.04	5.78	4.45	22.23	22.99	10.59	5.28	18.79	9.16	8.69	8.69	8.87	10.47
30	E7_Aa	NovelBoundary	0	17.11	0.00	17.09	7.56	20.63	7.04	14.09	8.01	13.19	14.02	12.27	6.30	0.00	21.90	39.93	14.01	7.39	32.79	8.19	4.92	9.70	16.84	27.74
31	ER7a	ExonRegion	0	46.45	15.26	107.88	47.88	14.69	28.08	19.64	79.89	70.88	46.82	127.06	72.16	68.05	146.41	213.39	214.32	135.92	82.10	106.51	87.57	165.68	144.23	189.78
32	E7_Da	NovelBoundary	0	0.00	0.00	8.25	6.29	4.33	5.79	4.02	13.55	7.75	5.24	0.00	0.00	6.82	9.89	27.44	3.50	4.30	39.75	0.00	3.20	5.44	0.00	15.11
33	E7a_E8a	KnownJunction	0	28.08	25.32	144.85	58.03	31.66	44.18	33.39	103.71	61.43	51.17	107.66	55.07	65.09	154.16	265.78	292.74	105.94	105.33	113.42	95.04	139.56	158.35	191.38
34	E8_Aa	NovelBoundary	0	0.00	0.00	20.73	10.49	4.33	12.72	4.20	9.69	9.23	7.25	0.00	0.00	0.00	25.08	4.45	3.67	0.00	30.22	4.24	21.92	0.00	0.00	11.18
35	ER8a	ExonRegion	0	31.21	19.39	156.71	66.08	28.08	37.76	25.36	106.42	84.30	68.73	124.40	48.54	75.68	170.36	260.17	248.38	126.41	88.36	106.66	97.72	205.01	191.25	205.63
36	E8_Da	NovelBoundary	0	17.04	5.46	9.64	2.06	4.07	10.16	6.09	21.44	19.27	9.24	4.63	6.30	0.00	36.79	35.35	12.48	7.67	42.28	3.86	11.95	5.31	2.76	7.51
37	E8a_E9a	KnownJunction	0	42.67	11.97	168.12	68.92	23.34	33.16	32.19	101.86	90.25	80.24	149.56	58.97	125.32	158.28	270.97	159.45	146.52	123.03	63.53	89.93	189.66	176.60	263.17
38	Ix	Intron	0	4.54	3.69	15.97	11.73	7.51	7.57	5.68	28.91	30.68	20.87	3.19	4.83	3.19	18.09	13.86	6.87	10.90	28.80	4.73	15.45	3.64	2.75	1.94
39	Ix_SR1	SilentIntronRegion	0	4.57	3.72	16.07	11.80	7.56	7.62	5.72	29.10	30.88	21.01	3.21	4.87	3.21	18.20	13.95	6.91	10.97	28.99	4.76	15.55	3.66	2.77	1.95
40	E9_Aa	NovelBoundary	0	6.82	12.23	23.68	21.04	15.96	12.49	4.28	31.75	48.70	18.51	0.00	0.00	6.66	29.84	21.39	20.25	12.16	84.03	13.55	26.72	8.59	7.96	15.96
41	ER9a	ExonRegion	0	58.03	24.47	119.94	53.16	22.14	40.40	24.76	82.62	91.35	77.48	124.75	45.34	59.43	141.06	231.55	174.92	137.60	100.64	69.81	81.29	177.29	131.82	180.37
42	E9_Da	NovelBoundary	0	44.90	24.93	105.11	31.90	12.48	20.27	31.58	39.64	44.13	38.84	16.69	7.35	13.47	23.84	57.98	86.30	34.03	153.13	91.11	56.18	43.99	51.13	69.06
43	E9a_E10a	KnownJunction	0	47.64	0.00	58.87	14.82	19.61	20.27	14.97	35.16	50.03	37.28	69.23	36.16	29.54	74.28	143.77	140.56	127.82	49.74	65.60	16.81	103.54	74.46	88.01
44	E9a_E11a	KnownJunction	0	6.15	0.00	4.88	5.73	0.00	0.00	3.93	6.00	1.42	1.05	2.16	0.00	0.00	2.65	0.00	0.00	0.00	5.68	3.58	5.56	2.78	2.88	4.35
45	E9a_E12a	KnownJunction	1	13.71	0.00	6.86	5.59	3.57	2.84	0.00	8.50	6.51	11.07	16.21	0.00	0.00	2.47	28.18	25.72	32.07	15.46	8.94	10.35	14.76	29.27	33.21
46	Ix	Intron	0	5.68	2.73	1.23	0.00	5.39	1.23	1.78	0.00	0.00	0.00	11.67	2.39	2.59	30.58	31.84	7.98	8.86	1.24	2.14	11.42	4.44	6.99	5.91
47	Ix_SR1	SilentIntronRegion	0	3.26	1.95	1.23	0.00	5.46	1.22	1.32	0.00	0.00	0.00	11.44	0.00	4.10	25.11	33.61	8.54	7.56	1.39	3.19	9.57	4.87	7.12	5.02
48	Ix_AR1	ActiveIntronRegion	0	7.07	3.21	1.23	0.00	5.57	1.28	2.07	0.00	0.00	0.00	12.25	3.64	1.97	34.37	32.26	8.02	9.84	1.22	1.72	12.72	4.41	7.17	6.58
49	E10_Aa	NovelBoundary	0	25.12	17.10	54.40	30.87	19.27	41.85	17.71	30.07	31.86	15.77	4.79	0.00	21.75	49.50	54.27	44.01	9.26	95.30	29.65	22.82	29.22	38.39	17.33
50	ER10a	ExonRegion	0	29.46	6.06	27.31	10.35	8.21	13.08	7.81	19.96	23.14	19.74	25.56	12.53	12.81	44.93	63.26	46.59	35.12	43.59	31.03	14.15	32.78	32.00	52.24
51	E10_Da	NovelBoundary	0	10.00	27.03	63.07	41.45	30.56	43.55	31.13	58.74	48.44	45.24	6.53	24.76	0.00	54.74	64.16	55.11	27.12	167.51	62.59	20.77	44.67	49.97	53.10
52	Ix	Intron	0	8.94	11.05	40.23	10.42	16.96	12.17	13.18	21.76	22.22	21.66	11.67	8.84	2.33	30.94	33.12	26.01	20.92	50.17	30.76	23.76	33.25	35.21	45.20
53	Ix_AR1	ActiveIntronRegion	0	9.04	11.18	40.69	10.54	17.11	12.32	13.34	22.02	22.48	21.90	11.81	8.94	2.36	31.28	33.51	26.30	21.17	50.75	31.11	24.04	33.64	35.63	45.74
54	Ix	Intron	0	14.59	6.31	23.91	16.80	6.45	15.15	6.84	34.62	28.54	30.04	8.66	0.00	1.33	36.15	32.29	37.89	27.30	79.44	43.91	29.33	37.95	21.54	49.59
55	Ix_AR1	ActiveIntronRegion	0	14.77	6.39	24.24	17.02	6.54	15.36	6.93	35.09	28.93	30.44	8.78	0.00	1.35	36.63	32.69	38.39	27.67	80.50	44.49	29.71	38.43	21.83	50.24
56	Ix	Intron	0	37.38	24.21	92.77	39.09	29.20	38.57	25.23	79.23	71.59	68.17	22.25	4.55	6.79	50.32	74.20	73.72	46.51	163.85	103.70	66.30	59.03	63.26	85.65
57	Ix_AR1	ActiveIntronRegion	0	37.66	24.40	93.48	39.40	29.42	38.88	25.43	79.83	72.15	68.70	22.41	4.58	6.84	50.70	74.74	74.29	46.86	165.13	104.50	66.80	59.49	63.76	86.31
58	E11_Aa	NovelBoundary	0	87.13	49.99	120.13	57.54	77.16	99.94	56.88	115.25	118.03	72.34	11.42	6.30	13.64	57.98	109.15	65.54	59.93	206.81	96.57	75.68	81.36	58.91	102.01
59	ER11a	ExonRegion	1	43.14	35.99	72.81	37.34	42.73	36.12	36.48	55.16	70.09	55.81	16.23	19.77	31.34	48.90	76.09	58.52	38.36	139.04	80.35	68.17	56.09	56.05	84.79
60	E11_Da	NovelBoundary	0	533.43	495.11	360.42	373.31	327.67	245.48	394.24	521.27	442.88	435.73	565.51	225.07	239.76	489.14	310.03	675.46	497.15	734.39	457.90	543.81	658.36	765.05	787.30
61	Ix	Intron	0	57.58	49.61	84.71	44.08	76.95	56.14	41.48	55.75	66.47	61.10	20.69	19.32	28.68	58.02	65.82	87.78	52.70	101.82	143.79	57.37	68.75	81.35	124.13
62	Ix_AR3	ActiveIntronRegion	0	80.37	84.05	112.81	63.16	125.97	67.57	65.30	84.80	104.96	96.02	28.17	39.06	46.69	88.50	94.16	125.76	79.57	144.14	198.16	79.59	87.65	124.66	180.22
63	Ix_AR2	ActiveIntronRegion	0	46.89	22.37	43.38	13.54	60.17	31.79	20.51	23.78	18.97	24.75	17.35	6.35	40.86	45.44	65.83	79.65	42.10	36.54	130.74	29.27	56.12	41.58	114.53
64	Ix_SR1	SilentIntronRegion	0	34.21	22.72	46.14	23.55	40.53	38.41	25.73	30.93	28.65	25.51	10.99	5.59	13.57	32.20	33.96	61.30	29.42	47.27	81.06	28.06	37.19	51.85	79.44
65	Ix_AR1	ActiveIntronRegion	0	45.45	25.48	84.55	39.07	36.51	59.48	22.51	39.18	50.24	46.26	18.59	3.36	11.85	36.29	50.77	53.85	33.96	98.81	118.99	55.21	70.96	48.00	78.83
66	Ix	Intron	0	50.47	25.41	113.15	49.98	32.75	40.22	23.30	55.51	72.98	59.05	15.28	6.56	4.43	38.04	73.85	52.68	43.35	92.86	65.79	67.28	49.72	47.55	68.51
67	Ix_AR1	ActiveIntronRegion	0	50.72	25.54	113.70	50.22	32.91	40.42	23.41	55.78	73.35	59.34	15.36	6.57	4.45	38.22	74.22	52.94	43.56	93.32	66.09	67.59	49.96	47.78	68.83
68	E12_Aa	NovelBoundary	0	97.50	40.19	178.59	75.55	79.80	65.19	44.56	118.38	119.62	73.01	25.59	31.36	13.15	64.57	100.25	85.96	58.16	170.50	137.79	98.43	80.43	66.62	113.62
69	ER12a	ExonRegion	0	16.93	2.03	39.82	6.81	5.35	3.67	4.63	21.61	12.35	18.35	18.36	0.00	0.00	14.62	33.36	53.50	36.31	30.49	22.30	18.09	58.40	36.46	44.05
70	ER12b	ExonRegion	0	60.78	25.60	115.51	58.78	51.44	47.26	33.79	69.73	86.17	61.68	37.48	15.27	9.88	54.15	108.51	71.18	58.61	120.70	77.96	69.40	72.95	81.23	96.46