Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF426 Gene 0 34.75 52.99 42.03 42.07 48.56 27.38 45.08 34.35 38.86 34.12 22.10 26.57 32.20 19.87 32.32 34.76 28.37 43.99 45.23 48.08 41.83 48.93 45.80 2 253115 Transcript 0 23.29 40.32 23.81 28.99 28.38 26.01 33.53 21.93 27.98 29.16 17.26 14.95 16.47 13.90 24.66 34.31 25.11 50.42 38.42 39.94 50.36 30.38 44.04 3 ER1a ExonRegion 0 15.06 21.72 1.85 3.75 20.55 14.74 11.29 1.34 1.79 4.15 10.07 0.00 7.43 4.78 18.12 21.76 10.21 17.92 13.34 3.05 18.05 8.69 13.08 4 E1_Da NovelBoundary 0 47.12 60.84 19.19 19.18 21.22 53.55 56.40 10.31 15.83 18.56 19.85 0.00 0.00 10.18 14.09 32.30 18.14 54.97 53.84 40.46 63.26 20.57 75.20 5 E1a_E2a KnownJunction 0 46.08 31.77 6.39 12.19 45.16 31.00 35.37 2.55 7.26 13.32 10.21 0.00 0.00 4.94 29.30 76.22 30.48 38.26 51.39 12.46 20.82 26.39 32.78 6 I1 Intron 0 1.41 4.53 10.17 6.33 2.38 0.82 4.72 5.16 9.02 10.66 3.44 0.79 0.86 3.11 3.34 7.28 12.50 14.53 18.44 11.85 15.71 5.10 15.70 7 I1_AR1 ActiveIntronRegion 0 1.43 4.57 10.26 6.39 2.40 0.82 4.76 5.21 9.10 10.75 3.47 0.80 0.87 3.13 3.37 7.35 12.61 14.66 18.61 11.95 15.83 5.15 15.82 8 E2_Aa NovelBoundary 0 6.52 13.22 27.70 23.87 4.33 2.90 8.66 11.67 19.82 18.72 7.32 6.30 0.00 4.77 15.20 18.71 4.77 65.95 50.07 29.66 25.64 18.06 48.83 9 ER2a ExonRegion 0 16.03 14.84 11.70 13.03 22.36 27.44 31.33 13.87 17.23 16.28 8.78 8.76 2.59 10.32 12.77 32.18 14.99 39.72 28.19 25.29 27.18 18.70 26.33 10 E2a_E3a KnownJunction 0 3.19 27.96 12.60 10.65 16.38 20.84 46.99 21.44 18.72 21.25 9.21 5.85 0.00 7.24 8.90 18.80 9.54 22.68 13.37 11.95 41.76 8.76 43.19 11 ER3a ExonRegion 0 14.62 31.65 17.07 22.30 17.38 18.90 18.67 20.02 25.03 30.17 23.09 12.84 8.44 14.74 19.80 47.02 28.29 69.67 30.89 40.88 58.61 30.48 45.07 12 E3a_E4a KnownJunction 0 13.78 29.47 10.88 24.11 18.93 11.87 26.19 25.22 16.78 26.43 22.69 12.60 18.83 2.24 8.90 25.29 29.92 54.80 31.44 34.90 49.24 31.72 32.10 13 E3a_E5a NovelJunction 0 0.00 10.00 4.32 3.90 0.00 0.00 0.00 4.48 1.79 4.03 0.00 0.00 0.00 2.18 0.00 11.88 0.00 4.56 18.73 2.81 3.03 0.00 11.78 14 E4_Aa NovelBoundary 0 0.00 6.45 18.89 11.29 3.23 0.00 2.25 3.94 0.00 4.59 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.11 22.87 2.43 2.90 0.00 4.35 15 ER4a ExonRegion 0 20.41 29.27 20.74 29.78 28.74 18.80 27.64 18.24 23.41 26.35 18.49 12.33 14.94 16.36 22.20 31.79 23.97 39.49 40.41 38.21 61.73 30.08 43.76 16 E4_Da NovelBoundary 0 0.00 2.57 13.60 7.62 7.05 0.00 3.58 5.96 1.24 2.71 0.00 0.00 0.00 0.00 4.45 8.72 0.00 2.57 0.00 3.26 0.00 0.00 3.93 17 E4a_E5a KnownJunction 0 16.67 47.69 31.99 43.35 12.48 13.57 26.06 24.23 31.48 41.29 18.90 11.70 6.82 12.07 22.75 14.36 4.68 51.24 16.85 41.42 74.63 32.45 57.96 18 ER5a ExonRegion 0 18.35 38.91 31.35 30.35 18.81 17.49 26.88 20.65 35.01 32.29 17.23 13.81 11.26 17.40 23.32 21.51 28.10 50.46 45.90 48.38 61.83 37.26 43.45 19 E5_Da NovelBoundary 0 2.74 6.51 16.59 10.79 4.33 0.00 6.23 7.15 1.59 0.00 0.00 0.00 0.00 0.00 4.45 0.00 4.68 11.90 4.80 2.49 3.15 2.45 12.89 20 E5a_E6a KnownJunction 0 45.05 46.04 15.73 37.02 39.13 35.43 31.09 20.78 39.09 39.46 23.90 6.30 33.11 18.66 49.57 36.14 34.41 65.50 52.52 59.32 84.20 31.29 27.57 21 ER6a ExonRegion 0 48.63 64.72 34.10 39.27 35.28 37.36 37.63 30.32 46.75 36.19 18.80 22.88 21.83 24.70 38.40 38.45 25.35 74.07 52.38 46.62 66.52 34.75 62.54 22 E6_Da NovelBoundary 0 3.19 14.87 29.33 13.65 4.07 0.00 11.57 10.10 9.84 7.28 2.21 0.00 0.00 0.00 10.75 10.42 4.21 8.33 17.79 8.69 2.35 0.00 0.00 23 E6a_E7a KnownJunction 0 13.93 62.23 46.54 43.95 40.83 65.53 57.94 29.53 37.53 40.53 23.53 25.21 40.42 25.72 25.96 38.02 16.74 69.02 45.74 73.06 55.78 29.02 68.29 24 E6a_E8a NovelJunction 0 3.63 0.00 0.00 3.50 10.70 0.00 4.15 4.76 3.50 4.43 5.16 0.00 0.00 2.24 0.00 3.42 0.00 7.71 9.60 0.00 6.05 8.14 10.50 25 I6 Intron 0 13.46 22.56 16.55 5.22 7.96 1.74 5.73 6.62 3.24 5.55 1.05 0.48 1.57 0.18 4.66 1.61 2.68 1.74 7.76 5.75 0.89 1.69 2.38 26 I6_SR1 SilentIntronRegion 0 13.49 22.62 16.59 5.23 7.98 1.74 5.75 6.64 3.25 5.56 1.05 0.48 1.57 0.18 4.68 1.61 2.69 1.74 7.78 5.77 0.90 1.70 2.39 27 E7_Aa NovelBoundary 0 18.67 3.03 8.90 6.19 14.86 6.93 25.08 14.09 8.45 0.00 0.00 0.00 0.00 6.71 0.00 7.43 0.00 1.99 13.08 5.69 2.53 0.00 0.00 28 ER7a ExonRegion 0 16.65 43.32 37.25 32.61 34.27 35.15 44.12 29.78 39.14 36.81 24.96 25.25 21.53 15.69 25.94 31.65 48.16 60.40 47.24 56.01 67.20 41.37 60.18 29 E7_Da NovelBoundary 0 3.78 5.33 6.30 0.00 0.00 0.00 0.00 1.56 0.00 2.85 0.00 0.00 0.00 2.41 5.93 0.00 0.00 0.00 20.33 3.26 0.00 0.00 0.00 30 E7a_E8a KnownJunction 1 20.37 54.86 29.12 43.65 16.89 13.06 29.54 30.81 37.15 36.08 5.37 34.96 19.48 11.95 27.69 46.14 42.73 62.88 58.45 55.99 31.20 38.15 57.62 31 ER8a ExonRegion 0 40.54 60.33 49.91 48.90 58.54 28.93 52.16 40.24 43.25 36.75 23.71 31.70 40.43 21.70 36.27 35.38 29.10 40.14 48.25 51.62 36.66 56.60 46.71 32 IG39 Intergenic 0 25.65 49.65 47.06 46.46 46.70 23.05 43.34 40.75 42.44 35.39 14.33 34.18 66.56 11.46 34.06 20.43 18.21 18.98 23.33 29.82 11.35 48.23 25.23 33 IG39_SR2 SilentIntergenicRegion 0 32.92 44.67 52.71 51.93 53.02 29.69 52.55 40.69 43.64 34.33 18.49 36.85 78.57 13.06 34.88 22.23 21.83 20.21 30.50 31.66 13.95 43.85 22.52 34 IG39_AR1 ActiveIntergenicRegion 0 19.86 53.60 42.57 42.11 41.66 17.77 36.01 40.80 41.49 36.23 11.02 32.04 57.00 10.18 33.40 19.00 15.33 18.00 17.62 28.36 9.29 51.72 27.38