Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SH2D3A Gene 0 19.32 0.04 2.03 1.17 5.55 0.87 1.58 6.04 2.39 0.42 25.83 4.39 8.61 28.04 44.62 28.59 9.91 0.11 0.20 1.31 3.08 3.51 2.54 2 437152 Transcript 0 4.64 0.00 1.12 0.37 0.00 0.00 0.03 0.53 0.37 0.00 3.05 1.20 0.43 3.37 6.05 6.06 5.41 0.00 0.00 0.69 1.59 1.53 1.76 3 245908 Transcript 0 14.49 0.00 0.75 0.95 4.41 0.27 0.92 5.22 0.80 0.51 27.61 1.92 8.59 27.70 44.82 30.31 6.54 0.00 0.00 0.44 0.77 1.91 0.68 4 ER1a ExonRegion 0 2.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 1.28 0.00 0.00 0.42 1.13 0.89 0.94 0.00 0.00 0.00 0.00 0.00 0.00 5 E1_Ab KnownBoundary 0 18.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 2.47 6.30 4.27 4.77 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 24.84 0.00 0.00 0.00 2.89 0.76 1.74 0.80 1.08 0.75 11.80 0.00 3.34 9.63 22.65 20.04 10.83 0.00 0.00 0.87 0.00 0.82 1.20 7 E1_Da NovelBoundary 0 14.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 1.61 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2a KnownJunction 0 55.34 0.00 0.00 0.00 12.48 5.68 4.50 4.89 1.65 2.79 22.48 0.00 13.96 15.07 20.15 31.19 9.54 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 12.76 0.00 0.00 1.51 8.32 1.35 1.37 4.77 2.34 0.94 33.10 0.00 7.15 15.36 33.12 34.19 13.59 0.00 0.00 0.00 0.00 1.55 0.00 10 E2_Da NovelBoundary 0 0.00 0.00 4.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 12.82 4.77 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 2.82 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 1.67 41.38 0.00 6.82 9.42 29.79 42.21 4.58 0.00 0.00 0.00 0.00 5.51 0.00 12 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 2.30 5.19 13.07 4.30 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 18.37 0.00 0.27 0.94 4.07 1.34 1.54 5.62 1.59 0.61 24.08 3.64 4.48 26.48 43.93 26.04 9.70 0.00 0.00 0.00 0.32 0.92 0.00 14 E3a_E4a KnownJunction 0 20.45 0.00 0.00 1.50 4.33 0.00 0.00 11.38 0.00 0.00 39.75 0.00 13.47 60.75 90.36 50.50 12.34 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 0 20.09 0.00 2.39 3.65 5.56 0.00 0.88 14.88 0.88 0.00 29.77 6.92 2.92 47.18 73.44 39.56 15.00 0.00 0.00 1.41 1.49 0.14 0.00 16 E4_Da NovelBoundary 0 6.74 0.00 1.77 2.06 4.33 0.00 0.00 0.00 2.55 0.00 10.32 0.00 13.64 2.47 10.14 7.78 4.77 0.00 0.00 3.26 0.00 0.00 0.00 17 E4a_E5a KnownJunction 0 18.08 0.00 0.00 1.47 12.14 0.00 0.00 9.32 2.92 0.00 8.95 0.00 0.00 26.31 40.30 15.72 7.95 0.00 0.00 0.00 0.00 0.00 0.00 18 I4_AR1 ActiveIntronRegion 0 11.09 0.00 0.55 0.69 1.15 0.00 1.34 1.74 0.77 0.87 7.85 2.92 9.19 10.98 11.30 7.50 5.57 0.00 0.00 0.00 5.84 4.07 5.89 19 E5_Aa NovelBoundary 1 42.75 0.00 1.54 1.56 23.60 0.00 2.16 0.00 6.77 0.00 7.00 12.15 26.62 4.94 42.52 28.88 8.79 0.00 0.00 0.00 6.30 8.51 11.18 20 ER5a ExonRegion 0 39.65 0.00 1.36 1.40 11.72 2.12 2.34 8.73 4.54 0.65 31.23 9.13 20.77 36.19 51.39 41.10 15.10 0.00 0.00 0.45 3.93 6.33 4.32 21 E5_Da NovelBoundary 0 0.00 0.00 5.71 4.13 0.00 0.00 0.00 2.55 3.59 0.00 0.00 0.00 0.00 5.47 0.00 4.02 4.77 0.00 0.00 0.00 8.59 0.00 3.67 22 E5a_E6a KnownJunction 0 14.45 0.00 0.00 3.46 3.99 0.00 1.90 8.17 4.80 1.64 27.74 0.00 15.10 28.84 47.10 34.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E6_Aa NovelBoundary 0 0.00 0.00 1.80 1.90 11.29 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 9.65 4.45 16.83 0.00 0.00 0.00 0.00 2.78 3.12 4.35 24 ER6a ExonRegion 0 17.83 0.00 0.75 1.39 5.61 0.81 1.27 6.44 5.10 0.30 35.36 4.70 13.34 29.77 57.07 48.60 8.57 0.00 0.00 0.00 7.71 3.66 5.16 25 E6_Da NovelBoundary 0 13.11 0.00 0.00 0.00 0.00 0.00 0.00 2.05 3.99 0.00 2.68 0.00 12.17 19.60 15.82 15.38 12.72 0.00 0.00 0.00 3.15 0.00 7.77 26 E6a_E7a KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 2.38 1.79 0.00 16.58 0.00 0.00 21.90 31.15 8.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 I6 Intron 0 7.95 0.00 0.00 1.09 2.15 0.00 1.78 1.38 2.47 0.00 11.93 0.96 6.44 11.03 20.66 17.55 9.75 0.00 0.00 0.57 1.76 1.68 5.52 28 I6_AR1 ActiveIntronRegion 0 8.04 0.00 0.00 1.10 2.18 0.00 1.80 1.40 2.49 0.00 12.05 0.97 6.51 11.14 20.86 17.74 9.85 0.00 0.00 0.58 1.78 1.70 5.58 29 E7_Aa NovelBoundary 0 0.00 0.00 1.83 0.00 20.29 0.00 0.00 1.89 1.45 0.00 11.74 6.00 0.00 32.20 26.08 24.69 13.56 0.00 0.00 3.07 2.66 0.00 0.00 30 ER7a ExonRegion 0 6.69 0.00 1.36 0.00 2.34 0.53 1.16 1.26 1.43 0.00 17.64 3.12 2.36 27.30 34.53 17.82 2.23 0.00 0.00 0.00 2.91 3.44 3.42 31 E7_Da KnownBoundary 0 7.33 0.00 3.43 0.00 0.00 0.00 0.00 3.66 3.04 0.00 2.32 0.00 0.00 2.47 9.39 11.02 4.11 0.00 0.00 0.00 5.37 2.94 0.00 32 E7a_E7b KnownJunction 0 20.15 0.00 1.83 1.63 0.00 0.00 0.00 0.00 1.50 0.00 17.69 0.00 12.50 31.84 28.31 14.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER7b ExonRegion 0 11.26 0.00 3.37 1.10 0.00 0.00 0.09 1.59 0.84 0.00 5.51 3.59 1.28 7.38 11.84 4.22 10.99 0.00 0.00 2.06 4.76 4.59 5.27 34 E7_Ab KnownBoundary 0 21.49 0.00 1.42 0.00 0.00 0.00 0.00 3.45 1.27 0.00 5.05 7.65 6.82 3.00 13.35 16.66 9.16 0.00 0.00 3.13 2.53 5.45 3.33 35 ER7c ExonRegion 0 12.39 0.00 3.90 0.06 3.30 0.00 0.57 3.88 2.75 0.00 28.99 2.42 6.30 35.48 36.62 17.65 8.71 0.85 0.00 1.69 6.87 4.34 2.57 36 E7_Db NovelBoundary 0 0.00 0.00 3.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 6.82 2.30 4.45 0.00 17.77 0.00 0.00 0.00 2.90 2.27 4.35 37 E7b_E8a KnownJunction 0 3.48 0.00 1.77 0.00 3.99 0.00 0.00 7.60 3.39 0.00 23.48 5.55 6.49 40.08 43.51 26.83 4.58 0.00 0.00 3.26 0.00 0.00 0.00 38 E8_Aa NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 6.66 4.39 0.00 0.00 3.26 9.20 3.12 4.35 39 ER8a ExonRegion 0 9.58 0.00 1.82 1.47 2.75 0.00 0.70 5.33 3.60 0.47 21.96 1.58 3.61 33.15 38.75 21.03 12.26 0.51 0.00 1.52 4.23 1.75 0.00 40 E8a_E9a KnownJunction 0 16.52 0.00 3.99 5.26 4.33 0.00 0.00 6.00 3.30 0.00 26.53 7.65 6.82 54.09 56.99 21.02 4.39 0.00 0.00 0.00 0.00 0.00 0.00 41 E9_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 1.07 0.00 9.05 0.00 0.00 9.18 4.45 4.36 3.93 0.00 0.00 0.00 6.30 0.00 11.95 42 ER9a ExonRegion 0 15.86 0.23 5.59 1.75 3.22 0.41 2.01 8.51 1.39 0.32 34.30 4.62 8.97 34.67 64.06 32.55 7.08 0.21 1.07 4.28 3.93 5.37 3.86 43 E9_Da KnownBoundary 0 10.45 4.87 6.15 1.93 18.76 2.10 10.47 9.90 2.98 1.45 32.69 6.00 26.78 18.13 46.97 30.76 4.39 0.00 0.00 0.00 4.88 7.65 6.57 44 ER9b ExonRegion 0 10.69 0.00 1.63 0.68 13.65 0.00 3.05 4.83 0.92 0.27 15.15 5.96 5.70 9.99 31.71 17.86 6.06 0.00 0.00 2.21 3.51 3.13 3.42 45 IG17 Intergenic 0 13.21 0.00 0.00 0.36 3.34 0.00 1.18 1.84 0.33 0.00 3.45 1.27 4.28 2.04 3.65 2.65 1.18 0.00 0.00 0.38 0.00 0.00 0.00 46 IG17_SR1 SilentIntergenicRegion 0 21.90 0.00 0.00 0.71 6.36 0.00 2.20 3.60 0.64 0.00 5.69 1.25 8.38 1.62 5.13 2.69 1.72 0.00 0.00 0.74 0.00 0.00 0.00