Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MKNK2 Gene 0 63.35 11.85 50.88 31.48 38.87 37.25 28.67 59.24 51.47 97.68 633.62 242.82 110.65 655.47 446.10 557.18 1259.55 47.36 77.48 37.75 91.76 28.96 29.52 2 250896 Transcript 0 148.60 11.45 38.63 27.53 46.63 53.22 20.19 78.17 68.70 82.92 1034.21 324.50 192.81 949.01 676.10 975.74 1890.39 69.90 88.20 90.45 107.04 26.89 25.94 3 309340 Transcript 1 79.94 28.15 84.38 37.06 94.06 77.00 35.82 92.75 29.31 189.56 382.47 84.78 53.89 233.62 332.65 191.15 611.31 37.93 152.85 9.01 100.26 65.52 36.11 4 ER1a ExonRegion 0 0.00 0.00 0.63 0.00 0.00 1.32 0.00 0.56 0.63 0.58 16.36 7.85 6.70 3.63 6.56 12.03 24.10 1.57 3.66 0.00 5.00 0.04 3.00 5 E1a_E2a KnownJunction 1 0.00 2.89 0.00 0.00 0.00 7.50 0.00 2.42 0.00 0.00 56.59 6.30 27.92 26.31 8.90 3.59 88.64 0.00 7.53 0.00 11.18 0.00 0.00 6 ER2a ExonRegion 0 12.74 1.70 26.57 7.52 11.85 14.75 7.67 20.20 22.69 45.05 482.09 212.17 83.40 530.34 336.60 262.19 1000.35 22.09 44.99 23.26 67.54 17.36 14.18 7 E2a_E3a KnownJunction 0 38.30 6.25 71.58 42.22 24.62 43.38 29.99 84.49 70.02 111.96 760.40 371.82 107.14 792.10 432.54 524.48 1657.50 71.55 34.26 36.30 115.09 25.96 36.19 8 ER3a ExonRegion 0 33.38 8.13 56.28 23.66 20.40 34.51 22.97 76.17 52.86 126.46 1102.06 378.58 187.17 998.11 618.36 576.36 1944.90 65.15 90.38 51.14 155.26 23.04 33.57 9 E3_Da NovelBoundary 1 13.71 11.64 39.00 3.46 0.00 2.67 0.00 23.86 32.46 70.14 311.13 108.34 33.76 397.02 206.94 108.52 716.50 32.42 23.06 13.74 53.38 10.23 16.22 10 E3a_E4a KnownJunction 0 17.71 6.05 59.90 38.19 29.37 20.39 18.20 91.68 67.10 111.67 1177.30 532.37 280.18 887.76 709.32 719.90 2453.85 54.84 106.64 61.17 181.50 28.17 40.12 11 I3 Intron 1 8.00 0.77 8.97 1.53 5.05 2.77 3.00 5.84 9.04 16.79 119.01 62.92 16.36 194.44 114.57 65.10 274.32 1.74 18.05 3.22 24.99 3.15 6.66 12 I3_AR1 ActiveIntronRegion 1 8.10 0.78 9.10 1.56 5.13 2.81 3.05 5.93 9.18 17.03 120.68 63.84 16.61 197.28 116.25 66.06 278.42 1.75 18.30 3.26 25.37 3.20 6.76 13 E4_Aa NovelBoundary 0 21.26 12.17 52.01 14.78 35.91 70.41 31.75 30.39 42.59 123.94 303.92 103.08 52.92 347.52 374.81 322.31 835.72 36.77 71.15 42.89 95.94 10.41 11.27 14 ER4a ExonRegion 0 55.61 20.22 74.92 47.38 52.05 37.77 38.80 100.66 75.96 170.50 1298.47 644.11 312.58 1570.01 1031.11 893.18 2729.36 66.12 132.47 75.34 229.86 54.25 67.74 15 E4a_E5a KnownJunction 0 80.61 51.44 131.22 55.44 80.22 60.36 56.53 129.05 104.34 223.73 1584.03 771.55 183.27 1774.86 977.69 1509.43 3059.56 99.86 134.03 99.65 254.34 69.07 90.31 16 E5_Aa NovelBoundary 0 3.26 0.00 15.49 0.00 8.66 0.00 0.00 0.00 10.04 3.09 4.84 0.00 0.00 14.60 19.53 6.92 7.95 6.51 3.48 3.26 2.84 0.00 0.00 17 ER5a ExonRegion 0 79.28 23.05 122.14 60.65 65.94 83.33 62.85 142.35 116.76 242.30 1787.30 657.90 215.55 1777.70 994.63 1443.76 3546.68 128.59 207.37 87.97 263.37 58.53 64.58 18 E5a_E6a KnownJunction 0 138.84 23.55 147.51 76.11 89.81 113.68 68.14 163.60 128.04 302.87 2040.15 795.26 247.39 1903.65 1406.15 1639.83 3986.62 136.22 214.50 94.15 284.98 43.11 104.48 19 E6_Aa NovelBoundary 0 20.08 0.00 26.49 7.23 21.39 0.00 8.83 15.44 10.39 6.10 48.06 24.61 0.00 40.97 61.19 38.71 87.42 11.61 4.61 3.20 21.68 0.00 10.76 20 ER6a ExonRegion 0 136.09 24.86 162.56 111.16 113.69 90.66 84.25 184.15 165.92 308.04 2358.26 929.92 316.40 2227.26 1358.48 2091.82 4417.51 193.37 253.52 114.49 311.05 105.19 118.35 21 E6_Da NovelBoundary 0 18.15 0.00 20.61 4.03 0.00 0.00 2.25 13.35 12.36 3.65 22.32 0.00 6.82 11.83 35.60 24.01 17.11 4.35 8.94 5.75 5.99 0.00 0.00 22 E6a_E7a KnownJunction 0 119.58 32.95 230.65 151.23 92.78 111.36 87.40 227.80 204.42 350.87 2491.74 1122.07 306.15 2874.76 1657.71 2673.83 5166.15 189.28 374.60 151.16 339.96 137.41 135.22 23 I6 Intron 0 12.74 0.34 8.24 1.02 3.13 0.00 0.89 2.15 3.69 1.43 15.84 3.58 1.29 9.81 17.98 20.38 36.43 4.45 5.86 1.07 1.84 1.05 4.42 24 I6_SR1 SilentIntronRegion 0 13.04 0.35 8.44 1.04 3.21 0.00 0.91 2.20 3.78 1.46 16.21 3.66 1.32 10.00 18.37 20.85 37.22 4.53 6.00 1.09 1.89 1.07 4.52 25 ER7a ExonRegion 0 105.37 38.75 167.11 120.08 68.88 99.72 69.38 199.19 163.49 308.92 1891.73 814.29 323.04 2199.23 1326.54 1891.32 4350.13 127.89 257.37 123.95 259.26 95.39 94.92 26 E7a_E8a KnownJunction 0 149.36 58.81 140.21 95.16 89.39 103.97 104.40 186.60 115.68 300.29 1663.21 567.33 195.60 1433.35 1114.41 1371.95 3447.31 139.53 182.59 88.65 199.54 55.23 74.78 27 ER8a ExonRegion 0 82.12 28.53 153.40 99.83 98.47 107.57 94.19 180.63 148.03 312.67 1713.34 621.30 273.85 1722.82 1112.04 1593.54 3673.17 110.09 205.50 111.89 259.68 78.58 92.63 28 E8_Da NovelBoundary 0 6.89 0.00 25.28 6.59 0.00 13.23 1.81 18.52 36.54 13.73 117.29 12.45 12.99 77.70 46.11 84.00 163.91 23.50 0.00 8.18 20.14 3.12 8.02 29 E8a_E9a KnownJunction 0 125.13 73.14 200.26 128.52 262.22 172.68 133.50 205.70 197.02 387.40 2303.27 819.57 437.31 2665.62 1616.30 2702.45 4573.44 171.12 383.26 192.52 325.32 156.08 168.42 30 E9_Aa NovelBoundary 0 23.04 6.45 37.46 11.39 7.39 11.24 1.68 14.09 36.11 18.24 89.02 31.51 13.64 32.02 53.90 64.34 165.78 24.04 7.91 3.26 29.16 3.12 7.68 31 ER9a ExonRegion 0 148.46 48.48 199.54 134.58 171.58 171.85 134.74 201.49 192.21 387.43 2288.59 887.31 385.84 2690.32 1531.24 2595.73 4481.91 201.34 347.66 135.94 317.22 136.47 125.33 32 E9a_E10a KnownJunction 0 206.41 50.45 203.22 155.13 160.53 172.68 151.57 197.36 174.22 399.46 2236.57 915.30 406.79 2491.15 1366.47 2355.28 4402.80 209.88 359.54 93.38 352.44 115.36 126.17 33 ER10a ExonRegion 0 106.44 24.76 154.95 97.76 112.16 114.34 91.79 157.06 162.43 312.26 1882.36 639.59 359.96 1956.54 1158.96 1796.43 3744.76 173.94 238.34 105.01 278.56 64.33 92.11 34 E10a_E11a KnownJunction 0 120.69 26.77 163.98 78.94 84.72 102.84 60.86 152.26 175.35 270.53 1598.19 569.74 346.41 1809.30 972.99 1320.51 3303.78 144.67 226.17 138.32 260.14 51.31 75.63 35 ER11a ExonRegion 0 163.74 33.11 150.15 76.88 97.92 119.78 82.61 148.00 148.80 250.65 1687.92 602.00 296.79 1717.22 1233.54 1478.64 3419.78 132.67 218.88 97.24 280.76 78.90 82.30 36 E11a_E12a KnownJunction 0 193.96 21.97 155.17 87.14 87.01 59.34 103.69 192.47 192.68 343.94 2171.13 725.04 337.64 1976.58 1503.93 1705.54 3829.26 200.05 184.76 142.92 301.66 75.13 105.08 37 I11_SR1 SilentIntronRegion 0 4.48 0.79 12.99 0.92 1.04 0.90 0.19 3.39 5.02 3.01 30.87 7.87 1.50 25.63 24.47 47.05 42.56 1.17 1.17 2.76 1.72 0.72 6.75 38 E12_Aa NovelBoundary 0 13.48 0.00 19.40 4.10 7.47 2.21 1.72 9.24 9.09 4.32 46.85 19.81 0.00 50.92 57.61 41.53 63.77 2.57 0.00 2.62 3.09 3.12 8.19 39 ER12a ExonRegion 0 177.25 32.13 185.38 106.40 111.86 133.16 88.48 222.02 209.26 351.08 2186.31 695.97 321.79 2005.65 1556.53 1792.10 4077.85 204.80 241.41 151.48 281.35 79.17 86.18 40 E12_Da NovelBoundary 0 10.89 0.00 23.24 5.03 0.00 0.00 1.63 6.41 17.22 4.86 63.75 12.15 12.66 33.37 33.87 33.32 75.55 4.23 8.85 0.00 6.05 3.00 0.00 41 E12a_E13a KnownJunction 0 166.62 35.78 126.37 85.77 158.74 118.57 96.72 176.86 166.52 292.26 1847.10 991.82 540.39 1853.56 1390.94 1497.30 3793.17 117.52 180.99 121.19 251.68 76.97 81.78 42 I12 Intron 0 8.39 0.60 16.21 7.57 4.91 2.28 5.01 12.65 14.27 11.22 59.93 11.75 4.19 52.34 42.71 63.31 110.54 7.28 10.55 7.18 8.34 2.47 6.08 43 I12_AR1 ActiveIntronRegion 0 8.41 0.60 16.24 7.59 4.92 2.28 5.02 12.68 14.30 11.25 60.06 11.78 4.20 52.46 42.81 63.45 110.79 7.30 10.58 7.19 8.36 2.47 6.10 44 E13_Aa NovelBoundary 0 21.41 0.00 18.54 7.76 7.47 6.98 2.16 12.61 9.69 8.70 89.81 5.85 0.00 53.03 55.26 66.48 115.94 4.44 15.72 2.49 5.99 2.76 0.00 45 ER13a ExonRegion 0 200.83 42.61 146.99 89.70 142.73 125.03 75.95 213.78 171.06 358.49 2115.78 759.03 423.06 1899.89 1488.74 1603.46 3948.62 162.56 194.09 147.63 285.88 79.17 77.75 46 E13_Da NovelBoundary 0 7.33 5.72 48.87 12.49 20.03 9.88 9.76 18.73 21.09 22.11 79.34 35.71 6.82 80.58 78.00 68.27 202.90 24.91 13.55 11.38 32.37 2.51 12.04 47 E13a_E14a KnownJunction 0 267.90 19.93 73.39 51.84 88.12 100.00 35.99 150.17 131.60 158.38 2002.82 627.35 371.57 1820.13 1289.58 1866.35 3647.03 133.11 169.79 175.07 205.35 51.74 48.57 48 E13a_E14b KnownJunction 0 79.94 28.15 84.38 37.06 94.06 77.00 35.82 92.75 29.31 189.56 382.47 84.78 53.89 233.62 332.65 191.15 611.31 37.93 152.85 9.01 100.26 65.52 36.11 49 E14_Aa NovelBoundary 0 58.75 5.33 45.80 8.59 11.04 9.99 12.59 29.94 19.79 31.16 64.60 12.15 13.31 125.20 106.93 77.16 111.64 29.27 8.19 11.38 17.79 14.70 6.49 50 ER14a ExonRegion 0 29.31 2.98 3.88 3.21 5.14 6.44 4.39 6.17 5.81 7.45 65.59 21.64 14.04 77.89 62.62 85.14 133.76 6.68 6.62 5.84 8.73 2.03 3.31 51 E14_Ab KnownBoundary 1 335.91 21.84 32.55 21.58 226.32 65.70 46.46 34.09 31.57 36.83 402.37 57.62 6.66 219.38 227.83 513.28 560.73 10.90 57.32 12.08 22.55 17.02 11.18 52 ER14b ExonRegion 0 131.27 19.65 62.64 47.93 92.89 36.71 39.92 78.98 48.51 115.21 518.72 288.36 122.91 591.92 477.18 459.57 1007.45 15.39 103.00 23.56 73.22 57.17 29.39