Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STXBP2 Gene 0 71.54 1.40 11.26 9.92 21.79 9.05 8.45 26.33 18.55 10.69 155.82 49.55 55.68 184.80 309.37 244.10 158.22 0.60 0.45 1.12 2.10 7.97 14.18 2 221283 Transcript 1 27.49 0.00 20.61 19.78 28.61 6.98 6.14 42.84 36.89 18.67 189.42 55.22 40.26 224.38 368.87 520.63 166.34 0.00 0.00 0.00 3.15 6.12 46.78 3 414284 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 441779 Transcript 0 0.00 0.00 0.00 0.00 0.00 8.52 0.00 0.00 0.00 0.00 12.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 320400 Transcript 0 14.41 0.17 0.79 0.30 2.88 0.76 0.80 0.80 0.29 0.58 4.43 7.04 5.46 15.36 28.28 17.63 11.52 0.05 0.20 0.26 0.48 0.40 0.72 6 IG33_SR1 SilentIntergenicRegion 0 10.74 0.00 1.42 1.08 5.51 0.39 1.15 2.75 1.33 2.54 3.53 7.05 3.37 6.61 7.20 11.54 3.34 0.59 0.68 0.89 0.47 0.40 0.95 7 IG33_AR2 ActiveIntergenicRegion 0 4.56 0.00 1.20 1.26 4.01 0.72 1.10 3.47 2.40 2.79 5.75 1.48 2.19 9.00 7.28 15.30 4.74 0.00 0.36 1.69 0.87 0.02 0.32 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 136.65 0.00 1.07 4.95 27.84 12.87 16.53 3.35 8.85 5.97 63.75 10.89 35.55 147.51 273.19 334.41 131.40 0.00 0.00 0.00 1.49 6.18 28.47 10 E1a_E2a KnownJunction 0 199.59 0.00 1.83 9.82 53.82 21.98 18.02 7.64 17.22 10.69 108.50 19.81 85.55 103.30 179.62 467.14 164.00 0.00 0.00 0.00 2.47 13.96 35.60 11 E1a_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 1 98.21 0.00 7.18 11.20 26.97 8.51 7.71 19.15 26.63 10.09 102.21 77.58 167.90 90.53 149.76 289.13 81.60 0.00 0.00 0.00 4.67 9.38 18.85 13 E2a_E3a KnownJunction 0 117.58 0.00 14.07 13.55 15.70 0.00 7.86 29.74 28.01 15.93 127.82 90.78 105.84 97.48 199.15 264.55 95.09 0.00 0.00 0.00 8.09 13.78 16.05 14 ER3a ExonRegion 0 59.37 0.00 12.43 10.95 11.39 1.52 7.27 33.07 31.95 13.01 313.32 68.85 75.38 155.26 219.19 217.69 248.53 0.00 0.00 1.74 7.58 13.24 13.39 15 E3a_E4a KnownJunction 0 41.19 0.00 11.27 18.05 7.89 2.90 0.00 41.61 44.62 16.01 379.83 102.78 61.36 283.30 327.96 356.83 308.18 0.00 0.00 3.00 3.03 7.35 30.47 16 I3 Intron 0 16.10 0.18 3.16 1.76 2.78 0.79 1.49 3.34 1.75 1.33 9.86 5.82 10.76 8.10 21.17 12.33 8.56 0.32 0.00 0.37 1.52 1.26 3.30 17 I3_AR1 ActiveIntronRegion 0 16.15 0.18 3.17 1.76 2.78 0.80 1.49 3.35 1.76 1.33 9.89 5.84 10.79 8.13 21.24 12.37 8.59 0.32 0.00 0.37 1.53 1.26 3.31 18 E4_Aa NovelBoundary 0 42.45 0.00 3.16 0.00 0.00 0.00 2.16 0.00 1.45 0.00 14.64 0.00 0.00 11.71 9.39 8.54 9.54 0.00 0.00 0.00 0.00 0.00 0.00 19 ER4a ExonRegion 1 55.77 0.00 18.17 20.32 18.45 10.05 5.23 40.27 35.53 19.83 235.24 113.52 166.59 307.44 538.24 773.49 219.10 0.00 0.00 0.97 5.92 14.40 57.25 20 E4_Da NovelBoundary 0 51.05 0.00 7.04 1.83 7.81 0.00 5.30 7.64 7.87 3.52 22.64 6.30 20.29 34.26 30.29 33.92 29.45 0.00 0.00 2.43 2.35 2.82 4.35 21 E4a_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 8.52 0.00 0.00 0.00 0.00 12.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4a_E10c KnownJunction 0 27.49 0.00 20.61 19.78 28.61 6.98 6.14 42.84 36.89 18.67 189.42 55.22 40.26 224.38 368.87 520.63 166.34 0.00 0.00 0.00 3.15 6.12 46.78 23 E4a_E10d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.47 4.05 14.97 18.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER7a ExonRegion 0 19.12 0.00 0.00 0.00 4.84 0.00 0.96 0.00 0.00 0.00 7.06 14.34 13.90 37.10 45.23 9.68 12.83 0.00 0.00 0.77 1.47 1.51 0.00 28 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER8a ExonRegion 0 26.05 0.47 0.00 0.00 9.97 0.90 3.70 1.29 0.00 0.10 18.16 19.37 10.92 39.56 77.91 44.77 25.61 0.00 0.00 0.50 0.10 1.94 2.13 30 E8a_E9a KnownJunction 0 29.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 5.89 29.30 25.12 22.35 0.00 0.00 0.00 0.00 0.00 0.00 31 ER9a ExonRegion 0 29.09 0.00 0.91 0.00 2.68 1.57 0.00 1.73 0.00 3.09 4.45 11.61 15.04 31.68 59.64 42.51 21.64 0.00 0.00 0.00 2.94 0.00 4.43 32 E9a_E10a KnownJunction 0 23.63 0.00 4.61 0.00 8.66 2.84 0.00 0.00 0.00 1.67 0.00 0.00 0.00 2.94 6.18 32.30 17.58 0.00 0.00 0.00 0.00 0.00 0.00 33 ER10a ExonRegion 0 25.41 0.37 3.16 2.73 2.09 1.58 3.04 5.79 3.18 1.50 12.38 18.46 11.14 28.78 55.21 28.17 18.69 0.50 0.58 1.55 0.75 0.38 1.07 34 E10_Ab KnownBoundary 0 72.16 0.00 7.86 2.06 4.33 2.10 2.25 10.84 8.71 2.69 26.43 13.95 7.14 24.25 42.77 58.62 34.88 0.00 0.00 0.00 3.15 0.00 0.00 35 ER10b ExonRegion 0 37.65 0.00 4.53 3.51 2.51 7.89 1.08 15.08 9.54 3.96 39.24 14.69 14.50 38.24 55.48 56.83 43.01 1.68 0.00 0.00 2.07 1.89 6.67 36 E10_Ac KnownBoundary 0 20.74 0.00 0.00 0.00 0.00 2.90 0.00 2.55 1.65 0.00 23.85 6.30 0.00 17.78 34.98 19.82 16.74 0.00 0.00 0.00 0.00 3.12 4.35 37 E10_Ad KnownBoundary 0 22.37 0.00 13.60 14.18 3.57 16.58 7.07 32.00 20.95 16.65 98.81 35.71 70.77 122.43 152.79 212.59 131.93 2.57 0.00 0.00 2.84 7.65 11.52 38 ER10c ExonRegion 0 59.50 0.00 20.15 22.71 24.97 20.17 7.80 53.97 44.46 22.17 219.06 63.50 95.89 266.54 398.44 501.63 232.53 1.85 0.00 0.00 4.41 12.73 46.33 39 ER10d ExonRegion 1 86.19 0.59 11.42 17.38 87.10 35.43 17.88 50.68 38.77 22.41 239.88 72.35 173.87 291.66 444.06 450.77 301.91 2.79 0.00 3.15 6.48 19.45 25.20 40 E10a_E11a KnownJunction 1 69.27 3.09 12.65 12.95 68.51 21.69 36.30 55.33 30.56 22.59 216.53 54.77 138.63 256.93 375.43 345.89 316.97 0.00 0.00 0.00 0.00 8.02 15.02 41 ER11a ExonRegion 0 72.04 3.54 17.76 13.18 23.05 17.67 19.67 53.13 28.22 19.88 290.10 43.34 83.56 318.48 477.67 367.06 313.14 0.82 0.00 0.00 5.13 13.90 17.31 42 E11_Da KnownBoundary 0 3.41 0.00 0.00 0.00 0.00 0.00 4.46 0.00 0.00 0.00 2.00 0.00 0.00 11.42 32.76 7.95 4.11 0.00 0.00 0.00 0.00 0.00 4.18 43 E11a_E12a KnownJunction 0 151.21 0.00 8.78 11.99 15.79 30.21 14.75 46.82 29.57 21.87 229.80 78.48 133.11 340.75 535.88 418.52 305.56 2.57 0.00 0.00 9.33 15.98 8.71 44 ER11b ExonRegion 0 5.85 1.05 0.00 0.52 3.45 1.42 1.10 0.00 0.00 0.00 4.13 6.17 4.97 8.06 19.22 11.39 8.04 0.00 1.64 0.00 0.00 0.54 0.27 45 ER12a ExonRegion 0 105.41 2.73 14.30 12.10 27.69 12.17 8.09 40.00 21.89 13.06 212.33 48.21 76.49 282.50 416.07 317.38 274.90 2.10 0.00 2.18 5.47 13.56 9.82 46 E12_Da NovelBoundary 0 93.79 3.35 1.83 0.00 3.99 0.00 0.00 2.55 3.27 1.61 25.59 12.00 6.33 14.24 46.60 75.19 13.00 0.00 0.00 0.00 0.00 3.12 8.02 47 E12a_E13a KnownJunction 0 132.17 2.50 23.30 23.67 28.44 12.15 21.24 39.27 25.20 14.37 166.31 43.06 70.61 287.19 533.53 350.93 238.62 0.00 0.00 0.00 0.00 10.65 20.15 48 I12 Intron 0 28.20 0.00 1.03 1.73 4.55 1.56 1.50 0.73 2.61 0.48 8.76 9.31 10.08 14.16 22.39 22.74 8.42 0.00 0.00 0.60 0.00 1.77 1.66 49 I12_AR1 ActiveIntronRegion 0 19.84 0.00 0.00 0.99 0.00 2.18 1.62 0.00 0.67 0.00 9.76 20.99 3.90 14.56 15.93 12.54 7.44 0.00 0.00 0.00 0.00 1.41 0.00 50 I12_SR1 SilentIntronRegion 0 32.78 0.00 1.57 2.12 6.88 1.28 1.47 1.10 3.61 0.73 8.40 3.67 13.32 14.19 25.92 28.17 9.04 0.00 0.00 0.91 0.00 1.98 2.52 51 E13_Aa NovelBoundary 0 47.12 0.00 1.12 1.73 0.00 2.73 1.94 2.55 3.99 1.48 18.90 11.70 12.99 24.07 45.00 44.69 9.44 0.00 0.00 0.00 0.00 0.00 0.00 52 ER13a ExonRegion 0 107.15 1.39 17.43 12.65 28.30 9.92 15.95 36.52 25.31 15.81 199.77 42.73 64.94 328.68 479.12 318.86 252.62 2.70 0.15 2.78 2.64 11.28 15.55 53 E13a_E14a KnownJunction 0 93.28 0.00 28.68 12.75 44.99 17.43 23.94 39.84 31.54 14.37 192.10 53.57 75.81 305.14 402.75 361.79 307.34 2.32 0.00 2.56 0.00 7.90 25.27 54 ER14a ExonRegion 0 96.12 2.95 25.45 20.60 31.19 18.66 16.03 45.24 31.19 18.19 251.38 47.16 55.35 331.46 496.22 431.43 271.10 2.14 1.14 2.34 0.69 15.13 26.95 55 E14a_E15a KnownJunction 0 204.48 2.83 31.02 24.17 49.07 2.27 10.16 56.44 33.25 24.77 301.39 104.88 116.06 363.12 645.78 485.34 340.63 0.00 0.00 0.00 2.53 19.47 30.73 56 ER15a ExonRegion 0 102.02 1.96 17.63 14.89 40.66 13.67 10.53 39.21 36.02 22.48 282.65 51.27 68.35 344.72 497.54 421.13 302.95 1.30 2.98 2.62 1.47 13.39 25.67 57 E15_Da NovelBoundary 0 33.34 0.00 4.49 3.30 0.00 5.00 0.00 6.57 9.00 0.00 13.11 0.00 0.00 23.37 20.77 22.90 9.07 0.00 0.00 0.00 0.00 3.12 0.00 58 E15a_E16a KnownJunction 0 133.13 0.00 12.92 22.08 39.22 7.61 12.19 46.13 31.65 17.19 306.02 63.47 123.04 350.99 569.26 467.74 307.43 0.00 0.00 3.13 2.47 9.06 7.60 59 ER16a ExonRegion 0 109.62 2.07 35.26 15.02 30.26 17.10 14.50 58.44 39.61 17.40 331.46 87.11 110.70 405.61 614.97 473.18 328.04 0.00 0.05 0.73 1.71 4.56 32.10 60 E16a_E17a KnownJunction 0 146.40 5.79 39.03 13.52 46.43 20.33 19.08 63.66 40.91 26.73 407.58 65.27 100.16 437.17 745.91 482.44 379.99 0.00 0.00 0.00 0.00 6.12 52.16 61 ER17a ExonRegion 0 158.19 2.77 25.23 15.71 60.24 23.23 25.86 43.76 37.56 25.86 424.97 142.28 123.01 421.39 668.69 527.78 345.34 0.00 0.00 2.80 2.84 18.66 41.25 62 E17a_E18a KnownJunction 0 235.38 3.09 21.05 14.25 74.02 28.11 35.15 42.68 36.83 16.25 471.38 101.73 110.06 469.25 687.07 603.69 335.58 0.00 0.00 2.94 2.66 31.11 50.11 63 E17a_E19a NovelJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 15.98 0.00 0.00 0.00 0.00 0.00 7.36 31.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER18a ExonRegion 0 182.88 2.71 22.43 15.26 69.27 29.41 20.66 50.85 38.15 15.65 346.90 126.68 105.03 364.87 547.48 487.83 276.75 0.00 2.01 1.71 0.90 11.27 32.05 65 E18a_E19a KnownJunction 0 152.62 6.58 24.13 19.94 37.18 25.33 16.38 64.81 49.36 19.50 256.64 162.05 115.90 395.79 669.26 549.43 222.25 0.00 0.00 0.00 3.15 3.12 28.26 66 I18 Intron 0 25.50 0.00 2.20 1.22 6.18 0.37 0.93 2.33 1.66 0.86 6.40 1.07 0.86 11.43 17.49 15.51 4.64 0.00 0.00 0.43 0.44 0.63 2.06 67 I18_AR2 ActiveIntronRegion 0 27.77 0.00 4.22 1.09 9.64 0.64 1.07 1.85 1.48 1.31 5.37 1.44 3.09 9.62 8.36 14.51 5.32 0.00 0.00 0.00 0.24 0.10 0.86 68 I18_SR2 SilentIntronRegion 0 41.17 0.00 1.79 1.78 7.06 0.00 1.81 5.13 3.21 0.68 13.56 1.22 0.00 16.83 30.12 22.76 8.44 0.00 0.00 1.46 0.75 0.71 5.22 69 I18_AR3 ActiveIntronRegion 0 17.44 0.00 1.99 0.45 3.13 0.00 0.00 0.24 1.79 1.61 5.43 0.00 0.00 9.91 20.57 16.05 2.57 0.00 0.00 0.00 0.00 1.06 1.20 70 E19_Aa NovelBoundary 0 86.61 0.00 7.81 0.00 0.00 18.40 0.00 11.17 9.32 3.06 25.16 6.30 6.66 17.36 71.95 53.58 17.30 0.00 0.00 0.00 0.00 0.00 3.67 71 ER19a ExonRegion 0 95.64 2.14 26.29 26.93 32.69 12.08 11.28 47.99 39.99 17.70 289.63 138.29 91.84 350.65 561.55 432.75 248.18 0.00 0.00 2.36 1.28 14.79 18.32 72 E19a_E20a KnownJunction 0 136.47 5.99 32.46 27.60 48.39 13.23 10.11 69.99 39.32 12.30 327.08 149.60 59.41 340.28 532.79 447.75 220.85 0.00 0.00 0.00 0.00 10.72 4.01 73 ER20a ExonRegion 0 162.09 1.94 25.39 21.74 44.83 13.87 13.31 54.79 37.85 24.05 313.57 120.95 56.49 297.51 627.57 408.48 240.76 0.00 0.00 1.97 2.80 16.95 17.73 74 E20_Da NovelBoundary 0 46.45 0.00 4.55 0.00 0.00 0.00 0.00 2.55 0.00 0.00 7.84 7.65 0.00 9.71 9.64 34.52 8.60 0.00 0.00 0.00 0.00 0.00 0.00 75 E20a_E21a KnownJunction 0 157.14 2.96 18.57 20.64 35.06 2.50 32.72 54.46 29.95 23.16 217.27 101.28 33.28 281.60 488.16 262.07 196.91 0.00 0.00 0.00 2.72 11.76 11.27 76 ER21a ExonRegion 0 96.50 3.14 16.63 17.02 41.14 18.07 14.48 40.51 18.02 16.07 215.82 51.41 47.93 280.38 487.92 265.17 196.75 0.00 0.00 0.00 1.03 8.92 16.82 77 E21a_E22a KnownJunction 0 109.72 3.16 14.96 30.00 35.23 6.70 7.91 74.02 22.05 20.68 204.47 63.02 45.78 256.52 475.43 285.31 201.31 0.00 0.00 0.00 3.09 15.00 4.01 78 ER22a ExonRegion 0 105.56 2.86 8.34 12.61 24.77 9.74 6.68 41.08 17.94 15.52 173.44 51.20 47.99 217.14 535.25 281.00 177.71 0.41 0.00 1.26 1.41 9.13 13.21 79 E22a_E23a KnownJunction 0 68.23 0.00 6.95 14.85 19.78 2.84 1.94 25.18 30.73 11.12 192.63 31.36 74.35 182.47 414.49 230.45 199.35 2.07 0.00 0.00 2.84 0.00 26.55 80 E22a_E24a NovelJunction 1 10.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.69 34.21 6.66 0.00 8.90 3.59 4.68 0.00 0.00 0.00 0.00 0.00 0.00 81 I22_AR1 ActiveIntronRegion 0 14.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.62 2.22 2.35 9.72 45.29 5.55 6.16 0.00 0.00 0.00 1.37 0.00 0.00 82 E23_Aa NovelBoundary 0 33.93 0.00 8.87 1.90 7.98 5.11 2.21 13.51 13.77 9.59 16.85 0.00 12.99 24.55 46.97 46.31 11.78 0.00 0.00 0.00 0.00 0.00 0.00 83 ER23a ExonRegion 0 62.60 1.31 9.39 7.88 8.62 5.27 6.87 28.06 19.72 11.67 154.75 42.91 57.59 192.28 392.05 231.32 183.74 0.94 1.03 0.00 3.04 8.39 16.91 84 E23a_E24a KnownJunction 0 102.39 6.64 8.81 9.56 20.63 12.44 17.67 25.75 25.98 9.03 163.73 65.42 94.64 129.38 360.10 261.47 196.17 4.52 0.00 0.00 0.00 5.76 11.95 85 ER24a ExonRegion 0 76.78 2.10 8.22 7.96 9.00 1.50 3.44 20.38 12.68 6.64 109.94 28.73 57.42 84.60 208.20 167.02 113.50 0.66 0.00 0.00 0.76 3.32 9.17