Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MBD3 Gene 0 76.66 63.05 333.81 133.78 52.56 76.12 58.95 153.66 100.98 266.50 277.40 38.49 34.07 329.59 432.49 243.68 222.38 396.80 180.28 217.52 229.41 168.39 183.02 2 434436 Transcript 0 11.87 17.74 34.74 22.12 0.00 3.33 11.10 11.03 10.46 29.14 54.81 0.00 3.89 43.15 81.44 48.43 25.49 36.51 35.40 35.53 40.33 34.77 21.55 3 156825 Transcript 0 8.80 8.42 48.02 11.37 7.20 13.59 11.54 15.16 13.37 48.95 18.43 7.80 5.46 24.99 32.03 32.49 20.40 59.02 30.47 43.15 32.89 22.32 24.69 4 355664 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 2.55 2.86 1.87 0.23 0.00 0.87 1.35 0.00 0.00 2.02 7.54 0.00 0.95 7.90 24.93 11.23 5.26 3.88 4.27 1.84 5.98 6.53 3.83 6 E1_Ab KnownBoundary 0 7.33 0.00 3.34 0.00 0.00 5.79 4.37 0.00 8.33 8.00 9.53 0.00 0.00 2.12 40.05 7.78 20.57 1.62 9.51 0.00 8.96 18.49 12.63 7 ER1b ExonRegion 0 9.91 15.44 22.84 14.31 0.00 4.17 8.06 6.13 7.35 25.02 41.47 0.00 12.15 32.11 65.41 32.02 30.16 25.53 10.86 23.50 33.06 26.90 22.69 8 E1_Da KnownBoundary 0 3.04 0.00 1.74 1.90 0.00 0.00 4.50 2.18 1.16 9.59 17.53 0.00 0.00 7.06 10.26 10.94 16.83 11.98 8.09 9.52 15.88 5.39 4.35 9 E1a_E2a KnownJunction 0 21.19 32.63 67.62 44.02 0.00 5.79 20.84 22.06 20.92 56.25 102.08 0.00 6.82 78.40 137.96 85.62 45.72 69.14 66.54 69.22 74.69 63.01 39.27 10 ER1c ExonRegion 1 15.96 27.22 43.83 28.20 0.00 3.81 14.05 19.15 16.91 49.14 95.01 2.00 15.15 74.33 122.52 74.76 47.99 58.84 49.25 50.90 64.92 49.36 41.11 11 ER1d ExonRegion 0 1.68 2.73 15.07 10.92 0.95 3.19 2.85 6.54 1.74 18.41 22.61 1.89 0.15 13.48 18.19 12.11 11.48 21.06 16.36 11.79 22.84 11.42 7.25 12 E1b_E2a KnownJunction 0 3.26 3.35 27.11 22.41 3.99 11.58 4.24 6.78 3.36 26.94 25.11 0.00 0.00 24.07 45.86 32.98 21.97 42.28 30.59 14.25 20.02 20.76 15.71 13 I1 Intron 0 24.13 24.12 58.52 28.85 33.98 21.43 33.02 43.84 32.87 75.66 38.84 29.02 28.79 59.43 85.34 75.49 67.47 119.54 79.79 81.59 55.75 37.41 55.05 14 I1_AR1 ActiveIntronRegion 1 11.34 13.82 37.22 15.74 14.01 14.91 19.43 29.85 21.15 52.01 30.42 18.48 9.48 46.04 74.44 61.77 50.77 100.17 50.32 65.38 48.97 22.99 48.44 15 I1_SR2 SilentIntronRegion 0 21.94 13.86 52.14 26.90 35.07 18.10 22.12 44.03 40.95 67.21 42.27 53.43 29.00 79.50 107.80 119.90 113.45 145.53 78.63 128.50 90.06 36.35 83.62 16 I1_AR2 ActiveIntronRegion 0 30.29 28.83 52.56 33.03 47.24 28.72 45.46 46.72 35.19 83.96 37.39 39.18 20.40 63.99 106.00 77.59 73.41 123.68 92.81 99.31 49.50 44.54 59.54 17 I1_AR3 ActiveIntronRegion 1 28.83 28.12 74.96 46.46 44.52 17.53 50.30 64.89 35.47 104.34 47.81 43.17 40.67 70.64 93.23 80.51 68.68 104.86 108.51 89.28 81.19 48.86 58.41 18 I1_AR4 ActiveIntronRegion 0 42.15 41.77 91.94 47.69 55.43 30.42 57.61 75.49 51.76 107.28 58.47 53.33 86.32 88.39 113.72 112.56 100.91 165.66 129.73 116.85 77.25 67.76 82.36 19 I1_AR6 ActiveIntronRegion 0 27.71 26.04 74.77 31.44 41.43 24.41 27.39 39.87 38.75 87.17 41.39 18.45 18.27 58.77 75.82 74.83 71.40 133.02 82.04 75.57 54.51 33.76 47.16 20 ER2a ExonRegion 0 40.97 54.54 239.38 111.63 34.94 59.35 41.22 123.85 88.67 209.86 283.17 48.54 42.03 264.08 363.64 209.76 203.58 348.47 176.95 182.25 229.94 131.61 143.23 21 E2a_E3a KnownJunction 1 46.38 72.49 456.02 229.51 62.39 162.58 52.69 168.86 146.64 340.13 296.29 75.17 60.39 385.90 535.76 420.83 305.38 627.27 273.23 302.97 272.44 222.34 272.39 22 ER3a ExonRegion 0 52.74 61.32 518.54 227.95 48.75 89.30 68.53 212.79 137.81 359.15 372.15 88.35 82.69 452.06 625.07 344.72 326.14 509.99 263.05 272.72 309.27 225.04 254.59 23 E3a_E4a KnownJunction 0 29.86 75.45 647.91 293.10 60.10 75.87 64.79 263.74 150.20 400.91 343.46 76.52 68.66 533.88 729.22 375.46 406.08 687.59 244.90 349.31 317.10 290.98 274.10 24 E3a_E5a NovelJunction 0 0.00 3.09 22.21 5.29 0.00 5.05 2.25 6.12 1.71 8.54 0.00 0.00 0.00 2.24 5.81 3.76 0.00 22.80 0.00 0.00 3.15 3.12 0.00 25 ER4a ExonRegion 0 43.05 87.02 619.57 269.28 76.21 85.70 82.35 239.76 162.55 427.34 428.57 96.06 66.18 561.20 649.78 388.66 376.96 612.11 272.02 300.21 384.27 242.17 308.57 26 E4a_E5a KnownJunction 0 68.31 98.93 618.61 215.42 111.97 96.76 77.81 258.44 155.67 381.04 390.15 83.88 59.57 458.00 520.43 358.45 348.95 654.96 225.79 279.32 323.71 176.11 239.44 27 ER5a ExonRegion 0 81.13 83.49 578.33 226.35 73.03 117.86 83.60 224.69 140.87 376.50 417.58 87.08 82.42 519.86 654.74 389.57 321.36 622.85 266.98 312.06 356.84 212.20 293.58 28 E5a_E6a KnownJunction 0 83.13 66.17 579.99 207.50 97.37 143.84 134.56 238.72 163.16 393.10 398.36 132.49 60.06 473.78 498.18 395.28 320.80 615.54 231.63 314.98 382.53 181.99 285.45 29 ER6a ExonRegion 0 70.27 72.40 385.84 128.61 52.37 89.52 77.85 152.30 104.76 292.92 339.74 60.57 54.72 412.02 557.07 304.02 296.35 427.64 236.01 271.97 309.88 195.55 222.18 30 E6_Da KnownBoundary 0 10.37 16.12 57.95 12.62 0.00 24.08 4.28 18.28 10.42 66.08 27.74 6.00 12.99 26.96 25.47 25.12 3.65 61.97 16.94 48.90 39.66 13.29 16.30 31 E6a_E6b KnownJunction 0 87.65 63.80 432.16 145.70 41.43 70.81 66.07 188.90 123.84 299.30 332.14 49.07 19.15 422.39 511.53 314.96 309.21 534.79 251.11 265.13 228.95 230.85 206.58 32 ER6b ExonRegion 0 8.80 8.42 48.02 11.37 7.20 13.59 11.54 15.16 13.37 48.95 18.43 7.80 5.46 24.99 32.03 32.49 20.40 59.02 30.47 43.15 32.89 22.32 24.69 33 E6_Ab KnownBoundary 0 24.23 12.56 52.04 19.54 11.88 7.55 11.57 25.75 18.43 45.80 7.48 5.25 7.63 22.19 57.11 19.48 21.04 54.84 31.06 33.94 36.33 14.08 47.55 34 ER6c ExonRegion 0 102.63 72.79 347.91 139.29 63.06 86.17 65.73 173.34 112.85 295.39 296.57 28.80 25.47 353.20 463.92 257.33 234.02 435.73 188.41 239.39 236.15 190.80 195.36 35 IG50 Intergenic 0 3.64 15.26 33.68 16.24 16.55 11.26 10.58 45.21 12.45 61.21 3.24 2.68 1.14 7.87 7.40 5.24 6.12 81.87 36.28 48.46 10.52 8.51 13.77 36 IG50_AR2 ActiveIntergenicRegion 0 4.36 12.17 41.56 17.53 19.16 14.03 12.73 56.59 15.16 79.79 2.09 1.75 1.14 9.85 9.17 7.00 6.15 118.28 45.62 68.24 12.53 12.26 15.26 37 IG50_AR1 ActiveIntergenicRegion 0 4.28 20.72 39.90 20.44 20.36 13.47 12.60 54.38 14.92 73.13 4.70 3.62 1.50 9.60 8.96 6.00 8.04 92.63 41.31 54.91 12.94 9.66 17.32