Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC139100.1 Gene 0 2.40 2.86 13.74 3.39 4.01 9.43 8.30 3.15 7.71 5.49 0.77 2.58 2.33 6.50 2.59 7.86 4.90 8.53 6.87 10.15 3.71 1.59 2.92 2 436130 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 424835 Transcript 0 1.41 1.04 1.99 1.40 2.16 2.70 3.38 1.12 5.78 3.29 0.00 1.61 0.98 1.79 0.09 3.41 0.45 2.71 3.35 4.13 0.65 0.44 0.37 4 IG3_AR1 ActiveIntergenicRegion 0 2.12 0.00 2.33 0.00 0.00 0.18 10.86 1.73 2.59 1.15 1.93 25.54 5.16 0.00 0.00 4.76 0.00 4.80 0.00 2.13 1.76 2.08 0.00 5 IG3_AR2 ActiveIntergenicRegion 0 3.37 1.57 4.22 6.33 2.16 4.80 11.21 1.73 8.77 3.00 2.69 18.58 6.23 2.14 5.44 2.10 2.38 2.99 3.47 7.77 0.83 2.31 2.10 6 ER1a ExonRegion 0 5.22 3.76 28.13 7.51 7.83 20.75 11.02 6.35 1.99 3.59 6.85 2.75 6.59 23.94 12.19 17.40 9.30 10.33 18.00 10.49 9.98 2.25 1.36 7 E1_Da NovelBoundary 0 6.52 0.00 48.55 12.25 4.33 19.08 15.55 4.48 11.95 4.16 0.00 0.00 0.00 14.72 4.45 7.78 16.08 20.44 13.18 22.88 5.50 2.45 0.00 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 4.33 0.00 3.03 0.00 0.00 9 I1 Intron 0 2.75 2.64 14.88 5.88 3.97 4.72 10.03 2.47 9.14 4.15 4.27 17.17 13.40 35.73 10.34 20.86 7.26 7.91 9.22 10.38 3.64 1.31 2.49 10 I1_AR1 ActiveIntronRegion 0 4.42 3.90 44.70 11.76 4.86 9.37 8.40 4.93 8.48 7.57 8.83 16.03 9.72 54.14 29.91 40.21 12.49 15.87 17.63 14.07 9.97 0.96 3.88 11 I1_SR1 SilentIntronRegion 0 2.46 2.42 9.71 4.86 3.82 3.91 10.32 2.04 9.26 3.56 3.48 17.37 14.04 32.55 6.95 17.51 6.35 6.53 7.76 9.75 2.55 1.37 2.25 12 Ix Intron 0 9.04 4.86 61.51 18.74 10.51 24.44 14.06 10.56 33.60 15.38 5.61 7.54 4.49 36.50 22.44 28.78 9.87 29.51 9.80 14.12 7.96 5.34 6.86 13 Ix_AR1 ActiveIntronRegion 0 9.47 5.16 65.11 19.82 10.60 25.52 14.57 11.13 35.48 16.22 5.96 8.00 4.65 38.58 23.75 30.01 10.37 31.19 10.30 14.74 8.32 5.60 6.97 14 E2_Aa NovelBoundary 0 0.00 3.35 5.62 1.56 0.00 32.71 11.04 0.00 18.92 5.29 0.00 6.30 20.45 2.47 0.00 7.95 8.88 0.00 0.00 14.57 2.90 3.12 0.00 15 ER2a ExonRegion 0 0.00 0.00 2.12 1.21 1.55 4.08 3.82 0.00 2.30 0.36 0.00 2.07 2.24 11.20 1.81 3.44 1.35 1.07 2.61 4.86 5.93 1.21 3.40 16 E2_Da NovelBoundary 0 3.04 6.25 12.71 3.53 3.82 10.62 2.03 0.00 6.22 9.21 0.00 0.00 0.00 11.89 0.00 8.20 3.93 8.42 4.71 20.45 2.66 0.00 0.00 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E3_Aa NovelBoundary 0 5.85 3.35 6.83 5.39 6.96 10.56 3.97 1.89 10.39 7.87 0.00 5.40 0.00 4.47 0.00 0.00 0.00 6.88 13.46 14.64 0.00 0.00 3.93 20 ER3a ExonRegion 0 2.81 2.07 3.98 2.80 4.32 5.41 6.76 2.24 10.34 6.58 0.00 3.23 1.97 3.57 0.17 6.82 0.89 5.41 6.71 8.26 1.30 0.88 0.75 21 E3_Ab KnownBoundary 0 10.89 2.43 6.15 4.76 7.64 2.16 0.00 2.51 7.96 3.17 0.00 6.30 0.00 4.94 4.45 4.19 0.00 13.68 17.60 15.53 2.84 3.06 0.00 22 ER3b ExonRegion 0 2.10 2.90 13.09 3.00 3.60 8.51 8.23 2.93 8.39 5.81 0.11 2.53 1.84 4.43 1.62 6.92 4.77 8.78 5.66 10.43 3.05 1.58 3.25