Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HMSD Gene 0 7.13 0.21 2.42 2.28 10.02 1.62 4.15 4.30 4.83 4.36 83.18 15.87 55.60 38.33 31.66 20.54 112.50 0.69 1.08 1.88 0.75 0.21 0.40 2 408945 Transcript 0 15.35 0.00 0.00 0.00 1.66 2.23 1.89 2.83 0.18 0.00 76.79 10.75 55.95 43.91 51.82 13.16 54.08 0.00 0.00 0.00 1.98 0.31 0.99 3 481726 Transcript 0 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 17.19 1.71 9.96 3.37 5.38 9.20 55.78 0.00 0.00 0.00 0.00 0.00 0.00 4 498680 Transcript 0 1.20 0.35 4.03 3.34 11.09 1.87 5.49 4.97 7.73 7.27 36.33 11.07 21.07 18.02 5.81 10.45 58.96 1.15 1.45 3.13 0.00 0.12 0.33 5 ER1a ExonRegion 1 16.04 0.00 0.00 0.00 3.80 4.54 1.74 2.33 0.00 0.00 77.79 0.00 1.65 99.56 106.02 53.76 183.29 0.00 0.00 0.00 1.97 0.00 0.00 6 E1_Ab KnownBoundary 1 41.27 0.00 0.00 0.00 12.99 2.50 3.97 4.72 0.00 0.00 133.09 0.00 6.82 53.45 102.97 58.96 387.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 1 19.79 0.00 0.00 0.00 12.57 1.79 1.91 2.77 0.00 0.00 112.78 0.50 13.52 36.94 62.21 59.30 335.62 0.00 0.00 0.00 3.18 0.00 1.50 8 E1a_E2a KnownJunction 0 21.49 0.00 0.00 0.00 0.00 5.51 2.08 1.52 0.00 0.00 38.59 0.00 27.43 10.18 37.09 0.00 9.16 0.00 0.00 0.00 3.15 0.00 4.35 9 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 16.47 0.00 0.00 0.00 0.00 0.00 57.86 0.00 39.77 4.94 21.39 50.41 228.89 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.83 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 10.10 0.00 0.00 0.00 0.00 1.13 0.40 3.75 0.00 0.00 92.92 21.05 50.70 35.89 41.38 2.89 15.44 0.00 0.00 0.00 1.93 0.00 0.57 12 E2a_E3a KnownJunction 0 14.89 0.00 0.00 0.00 0.00 0.00 4.28 5.09 0.00 0.00 92.71 6.30 69.48 39.50 51.67 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 13 ER3a ExonRegion 0 16.35 0.00 0.00 1.38 8.79 1.03 4.53 4.62 0.42 0.00 261.07 32.79 135.01 104.96 105.66 49.58 376.48 0.00 1.08 0.00 3.23 0.00 0.90 14 E3a_E4a KnownJunction 0 44.45 0.00 0.00 0.00 22.16 2.73 1.90 5.34 1.62 0.00 285.65 24.01 166.06 86.06 77.88 86.56 341.09 0.00 0.00 0.00 3.15 0.00 0.00 15 E4_Ab NovelBoundary 0 20.45 0.00 0.00 1.73 19.44 0.00 0.00 2.09 0.00 0.00 203.63 72.02 151.94 68.63 35.23 71.95 235.25 0.00 0.00 0.00 0.00 0.00 0.00 16 ER4a ExonRegion 0 24.97 0.00 0.00 1.20 17.12 1.83 0.64 2.56 1.24 0.00 279.50 55.76 180.10 79.00 66.26 77.75 303.81 0.00 0.00 0.00 2.20 0.00 0.00 17 ER4b ExonRegion 0 11.40 0.00 0.09 1.91 20.72 0.18 2.19 1.19 0.73 0.09 239.16 50.88 179.73 85.31 73.09 38.99 316.53 0.00 1.75 0.14 0.00 0.00 0.00 18 E4_Da KnownBoundary 1 7.04 0.00 0.00 0.00 4.33 0.00 4.50 2.55 1.62 0.00 136.98 16.81 104.54 36.73 15.20 3.85 163.07 0.00 0.00 0.00 0.00 0.00 0.00 19 E4a_E5a KnownJunction 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.80 11.85 13.64 9.18 4.45 0.00 50.96 0.00 0.00 0.00 0.00 0.00 0.00 20 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.22 6.15 20.13 9.89 10.51 8.03 111.73 0.00 0.00 0.00 0.00 0.00 0.00 21 E4a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 2.68 0.00 0.00 0.00 0.00 0.00 16.36 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4c ExonRegion 1 14.21 0.00 0.00 0.00 4.51 0.00 0.98 1.46 0.91 0.00 81.92 26.39 130.50 34.43 22.96 9.16 62.52 0.00 0.00 0.00 0.00 1.55 0.00 23 E4_Db NovelBoundary 0 0.00 0.00 0.00 0.00 7.89 0.00 0.00 2.14 0.00 1.40 60.38 18.91 67.53 23.72 26.58 12.56 20.76 0.00 0.00 0.00 0.00 0.00 0.00 24 I4 Intron 0 2.09 0.46 1.30 2.03 4.93 0.65 1.71 2.85 3.19 1.87 18.55 7.62 29.10 12.33 6.12 8.19 37.56 0.34 0.30 0.83 0.05 0.20 0.35 25 I4_AR1 ActiveIntronRegion 0 3.98 0.00 0.42 0.00 4.18 0.00 0.91 1.77 2.27 0.20 70.13 20.75 107.49 31.21 15.55 15.37 64.32 0.00 0.00 0.00 0.00 0.95 0.79 26 I4_AR2 ActiveIntronRegion 1 2.78 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.21 0.00 52.19 28.71 59.98 41.20 7.18 13.92 71.06 0.00 0.00 0.00 0.00 0.00 2.94 27 I4_SR1 SilentIntronRegion 0 2.35 0.08 0.38 0.51 1.59 0.07 0.71 0.84 2.22 0.56 13.52 6.34 20.82 10.23 5.10 7.59 35.50 0.11 0.37 0.12 0.00 0.16 0.35 28 I4_AR3 ActiveIntronRegion 0 2.25 2.97 7.28 9.17 13.15 1.20 4.75 11.97 7.29 8.57 9.81 5.51 32.13 10.16 7.97 6.58 46.08 0.73 0.42 3.39 0.59 0.00 0.39 29 I4_SR2 SilentIntronRegion 0 0.00 0.80 2.02 4.90 12.74 2.75 4.14 5.88 5.04 4.01 9.71 5.00 10.31 9.01 3.28 6.78 24.33 1.14 0.21 2.50 0.00 0.00 0.00 30 E5_Aa NovelBoundary 1 3.41 2.83 10.56 10.22 21.99 8.52 29.24 6.37 16.81 21.19 10.00 18.91 50.65 21.78 8.90 16.49 36.28 2.57 0.00 8.31 0.00 0.00 0.00 31 ER5a ExonRegion 1 2.40 0.69 8.07 6.69 22.19 3.75 10.98 9.94 15.47 14.54 34.87 10.28 28.51 26.86 7.17 20.90 66.96 2.30 2.89 6.26 0.00 0.24 0.67 32 E5_Da NovelBoundary 0 0.00 3.35 13.39 5.23 16.64 4.88 18.64 7.64 5.18 10.77 12.42 18.46 19.80 22.72 0.00 12.39 45.54 0.00 4.80 15.21 0.00 0.00 0.00 33 E5a_E6a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.21 0.00 0.00 2.41 0.00 8.37 22.53 0.00 0.00 0.00 0.00 0.00 0.00 34 I5 Intron 0 2.22 1.71 6.76 8.80 16.82 5.25 12.95 12.07 16.33 14.21 17.69 22.12 23.11 17.35 6.19 10.38 47.28 0.90 3.56 5.80 0.31 0.44 0.21 35 I5_SR1 SilentIntronRegion 0 2.64 1.90 4.54 8.23 13.87 7.38 11.91 11.39 12.98 10.93 15.02 15.17 19.91 14.45 3.60 7.51 41.14 0.83 4.54 4.99 0.37 0.28 0.00 36 I5_AR1 ActiveIntronRegion 0 1.69 1.48 9.56 9.53 20.56 2.61 14.29 12.96 20.57 18.35 21.08 30.87 27.18 21.02 9.45 14.01 55.09 0.98 2.35 6.83 0.23 0.64 0.46 37 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.50 2.99 7.35 6.79 3.11 4.73 48.47 0.00 0.00 0.00 0.00 0.00 0.00 38 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 1.47 2.48 2.00 1.68 1.23 1.39 0.00 0.00 0.00 0.00 0.00 0.00 40 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.36 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00