Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC027097.3 Gene 0 44.30 18.26 41.47 38.55 20.49 29.42 15.91 11.14 8.14 20.31 22.27 36.52 64.96 52.24 53.31 78.49 37.92 15.99 21.77 17.91 12.86 9.28 13.28 2 420338 Transcript 0 18.72 7.65 19.11 14.59 9.66 12.32 7.98 4.66 3.83 7.70 10.14 16.48 28.15 25.84 24.33 33.84 17.14 6.70 10.10 8.04 5.17 4.39 8.22 3 ER1a ExonRegion 0 32.06 14.06 0.00 1.28 21.90 21.94 30.83 0.00 0.00 0.00 8.52 18.92 21.54 17.38 25.14 48.65 20.78 8.14 24.07 19.99 12.49 11.81 44.38 4 E1_Da NovelBoundary 0 20.74 18.68 23.24 20.51 23.94 0.00 9.76 25.67 13.11 6.07 7.32 6.15 6.49 9.89 11.13 14.95 21.04 18.20 4.52 3.07 2.78 6.18 7.85 5 Ix Intron 0 25.59 10.97 18.02 13.25 10.85 4.07 8.20 4.91 2.20 5.16 10.43 14.10 21.36 14.12 22.40 42.04 15.48 8.63 10.36 12.85 8.77 2.31 10.28 6 Ix_SR1 SilentIntronRegion 0 25.63 10.99 18.05 13.27 10.87 4.08 8.21 4.92 2.20 5.16 10.45 14.12 21.40 14.15 22.44 42.11 15.50 8.64 10.38 12.86 8.79 2.32 10.29 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.71 0.00 0.61 0.00 0.00 0.83 0.00 0.00 1.33 0.00 0.00 0.00 9 Ix Intron 1 11.40 4.38 7.87 8.02 6.73 3.95 2.85 0.93 2.64 6.14 11.11 22.04 46.77 12.76 25.68 68.32 15.41 8.25 5.72 9.17 10.30 3.74 14.77 10 Ix_SR1 SilentIntronRegion 0 11.57 4.43 7.98 8.14 6.82 3.98 2.89 0.94 2.68 6.23 11.27 22.33 47.40 12.95 26.05 69.29 15.63 8.37 5.80 9.29 10.44 3.79 14.96 11 E3_Aa NovelBoundary 0 25.78 9.34 32.58 16.12 4.16 0.00 2.25 8.42 8.39 8.76 11.90 24.76 40.58 24.37 16.81 82.46 30.76 12.60 43.86 36.30 18.59 8.21 8.71 12 ER3a ExonRegion 0 4.19 0.12 0.12 0.33 0.00 0.11 0.11 0.00 0.27 0.14 0.04 10.74 4.03 8.12 4.41 6.18 3.30 0.00 0.19 0.13 0.00 0.00 0.12 13 E3_Da NovelBoundary 0 48.97 9.01 20.40 13.65 11.97 4.94 7.91 10.51 6.45 9.59 2.26 25.21 38.15 30.67 29.30 34.86 20.48 2.53 0.00 11.19 14.95 2.76 11.87 14 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 Ix Intron 0 23.89 2.13 11.83 6.37 7.27 3.83 3.60 3.23 3.85 6.43 5.25 31.30 52.30 14.92 21.87 41.62 13.11 6.14 6.66 12.01 4.61 4.35 10.43 16 Ix_SR1 SilentIntronRegion 0 23.99 2.13 11.88 6.39 7.30 3.85 3.61 3.24 3.86 6.46 5.27 31.43 52.52 14.98 21.94 41.79 13.16 6.17 6.69 12.06 4.63 4.37 10.48 17 E4_Aa NovelBoundary 0 73.05 3.09 14.13 13.65 16.98 41.00 6.32 11.17 2.98 6.29 16.74 18.16 63.31 23.90 38.32 35.03 11.87 4.48 31.72 23.84 0.00 6.12 0.00 18 ER4a ExonRegion 0 47.16 23.27 49.10 51.41 24.83 36.89 20.10 12.49 9.25 24.57 29.22 44.92 87.19 62.70 64.19 99.68 50.82 17.24 21.24 23.83 17.12 12.78 14.47 19 E4_Da NovelBoundary 0 14.52 3.35 12.30 7.52 7.81 8.35 15.15 10.06 1.39 6.61 5.37 26.86 33.28 11.30 12.24 11.62 4.77 6.55 8.85 6.52 0.00 11.63 4.35 20 E4a_E5a KnownJunction 0 3.78 8.49 15.20 1.66 0.00 2.78 2.25 0.00 2.55 1.37 8.58 5.85 20.29 19.37 19.66 7.60 20.10 0.00 3.86 0.00 0.00 2.94 0.00 21 E4a_E6a NovelJunction 0 19.93 42.30 19.72 26.87 17.66 14.31 0.00 11.09 1.79 14.18 17.16 7.50 6.66 38.38 20.15 42.98 8.51 6.34 31.34 18.15 3.15 2.82 7.51 22 I4 Intron 0 11.88 1.87 8.72 11.57 10.09 6.45 4.10 2.37 2.77 4.58 7.93 23.31 49.56 8.28 11.69 34.10 14.37 3.31 7.47 8.73 4.43 1.57 8.12 23 I4_SR1 SilentIntronRegion 0 11.89 1.88 8.73 11.58 10.10 6.46 4.11 2.38 2.78 4.59 7.94 23.35 49.65 8.29 11.71 34.15 14.40 3.32 7.48 8.75 4.44 1.57 8.13 24 E5_Aa NovelBoundary 1 21.71 9.14 20.02 10.52 7.39 7.38 12.54 0.00 2.40 7.04 2.21 36.31 21.26 14.19 0.00 3.59 8.51 0.00 8.56 6.26 0.00 0.00 0.00 25 ER5a ExonRegion 0 8.11 4.64 15.38 6.26 4.60 6.33 3.97 0.27 4.73 1.24 11.24 18.11 29.06 19.54 16.67 22.65 14.32 3.12 4.89 7.46 1.58 6.25 2.69 26 E5_Da NovelBoundary 0 61.42 14.80 6.77 14.88 12.22 6.64 5.92 7.31 1.36 4.94 6.63 25.21 14.28 2.18 4.45 16.06 13.56 0.00 0.00 8.25 0.00 8.94 0.00 27 E5a_E6a KnownJunction 0 9.48 0.00 16.29 6.89 11.38 6.47 2.21 1.73 4.54 3.20 2.53 5.70 34.41 9.24 22.62 23.24 0.00 0.00 3.76 2.68 0.00 3.06 8.71 28 I5 Intron 0 29.55 6.06 11.56 7.94 12.95 8.53 7.39 8.15 3.08 4.14 6.48 12.66 34.71 12.00 14.17 23.79 17.20 4.28 8.30 7.52 5.74 1.94 6.56 29 I5_SR1 SilentIntronRegion 0 29.55 6.06 11.56 7.94 12.95 8.53 7.39 8.15 3.08 4.14 6.48 12.66 34.71 12.00 14.17 23.79 17.20 4.28 8.30 7.52 5.74 1.94 6.56 30 E6_Aa NovelBoundary 0 36.52 8.88 26.73 22.51 10.27 7.15 8.52 19.43 9.35 26.62 16.37 6.30 21.59 26.43 11.37 48.88 33.66 20.15 4.24 24.10 7.60 8.27 11.35 31 ER6a ExonRegion 0 27.86 12.71 26.80 23.14 9.66 20.39 6.17 9.87 4.49 13.56 18.21 22.38 44.30 35.82 38.31 53.55 25.10 12.87 20.24 11.66 7.95 4.20 6.46 32 E6_Da NovelBoundary 0 37.19 2.43 32.38 34.46 11.63 15.79 3.97 15.24 12.04 20.44 13.64 30.16 32.63 27.19 4.33 39.31 18.05 16.79 22.31 9.20 0.00 13.90 10.33 33 E6a_E7a KnownJunction 0 7.26 3.09 31.61 22.61 7.72 11.58 6.09 13.14 3.91 11.93 18.48 12.75 13.64 54.51 20.27 35.20 22.25 12.10 9.60 8.88 5.93 0.00 4.01 34 E7_Aa NovelBoundary 0 61.12 6.12 33.35 22.57 40.15 13.40 4.46 12.57 11.92 27.02 13.79 6.90 27.11 24.02 19.28 34.44 12.72 8.91 14.40 8.50 22.24 0.00 3.76 35 ER7a ExonRegion 0 84.72 24.45 74.85 61.49 35.83 41.37 24.06 18.41 16.26 36.42 24.87 55.64 83.34 82.80 80.67 109.33 48.11 26.91 33.29 20.55 16.93 11.64 17.81 36 IG43 Intergenic 0 23.42 8.29 15.55 28.47 16.69 13.65 9.09 7.02 6.06 11.54 9.46 19.76 29.85 10.11 15.39 29.37 12.63 5.75 11.58 6.99 4.97 3.30 7.01 37 IG43_SR1 SilentIntergenicRegion 0 35.52 16.15 41.43 48.35 27.42 30.58 18.09 13.77 8.56 21.57 18.58 34.13 30.39 35.81 48.70 60.12 31.54 8.15 24.81 12.47 9.12 9.05 13.03 38 IG43_AR1 ActiveIntergenicRegion 0 15.23 20.06 17.12 25.95 19.38 21.34 11.13 13.49 7.05 19.25 11.57 18.86 17.23 13.63 17.17 32.36 14.38 7.38 21.77 8.41 2.52 3.36 8.88 39 IG43_AR2 ActiveIntergenicRegion 0 13.15 7.37 13.24 20.91 13.16 12.82 6.86 12.51 4.76 14.10 2.00 22.55 26.07 7.77 12.33 17.70 5.98 4.04 8.25 4.96 1.71 7.01 3.80 40 IG43_SR2 SilentIntergenicRegion 0 38.23 11.62 18.56 29.52 22.26 14.33 10.35 5.41 6.34 13.49 6.01 23.12 37.24 10.13 15.65 38.96 10.26 8.65 18.19 7.87 4.81 2.45 5.92 41 IG43_AR5 ActiveIntergenicRegion 0 22.72 3.03 14.59 13.94 12.72 9.45 4.22 4.44 4.50 9.05 4.92 10.70 28.94 7.26 20.04 15.08 11.40 4.53 13.34 3.89 6.24 2.75 6.09 42 IG43_AR6 ActiveIntergenicRegion 0 34.72 4.88 16.28 34.21 10.79 13.88 5.53 5.81 6.21 10.85 9.13 11.84 25.42 10.41 19.60 39.91 16.01 9.12 12.54 7.30 5.49 4.53 11.63 43 IG43_AR7 ActiveIntergenicRegion 0 78.73 14.37 18.87 47.06 19.44 16.26 8.91 10.49 8.32 14.83 13.01 18.76 40.96 13.86 28.43 103.03 32.57 14.78 26.97 8.37 10.58 4.17 31.72 44 IG43_SR5 SilentIntergenicRegion 0 16.84 7.50 13.79 26.18 12.67 11.46 7.59 6.02 5.34 10.47 7.91 15.61 25.11 7.18 12.26 25.41 11.22 5.10 8.96 5.87 5.76 2.54 6.32 45 IG43_AR8 ActiveIntergenicRegion 0 34.46 8.58 14.44 34.54 14.31 15.32 15.49 9.10 8.62 14.57 10.99 32.73 54.63 9.83 8.02 29.73 13.78 7.38 9.58 10.32 5.89 2.11 8.36 46 IG43_SR6 SilentIntergenicRegion 0 23.42 6.89 11.83 26.11 18.52 11.98 8.25 6.28 5.96 9.59 10.01 19.59 31.24 7.97 12.40 25.11 10.54 4.98 10.32 6.55 3.46 2.91 6.17