Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PIGN Gene 0 30.51 23.85 53.78 38.92 42.23 48.07 55.70 18.78 25.35 27.20 61.72 96.10 52.92 63.87 46.76 42.95 52.40 16.66 22.70 34.29 31.12 44.06 33.59 2 400334 Transcript 1 0.00 0.00 0.00 2.06 15.11 10.22 3.75 0.00 5.12 0.00 14.64 29.71 20.45 12.60 17.31 0.00 20.85 1.91 0.00 2.62 9.02 5.76 0.00 3 357637 Transcript 0 4.66 0.00 8.76 5.71 7.54 6.41 17.16 3.30 2.00 0.72 16.11 10.40 14.06 5.90 3.92 15.59 10.54 9.71 2.57 11.76 8.87 9.34 12.79 4 ER1a ExonRegion 0 13.18 8.76 10.91 5.46 12.17 26.78 33.78 1.81 7.41 6.71 29.44 7.58 5.33 25.88 10.54 35.30 43.22 8.22 12.58 21.09 40.03 20.33 27.82 5 E1a_E2a KnownJunction 0 0.00 0.00 9.76 1.60 0.00 0.00 5.17 0.00 3.39 1.50 53.75 6.30 6.66 10.71 0.00 16.58 47.87 1.58 4.80 2.88 48.06 11.88 19.04 6 E1a_E3a NovelJunction 1 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 12.53 0.00 5.68 4.83 0.00 0.00 27.30 3.65 0.00 0.00 2.72 0.00 4.27 7 E1a_E4a NovelJunction 1 0.00 0.00 4.23 4.03 6.28 2.84 7.95 1.73 7.47 13.08 61.91 0.00 7.47 29.49 4.45 16.58 44.69 11.61 4.52 24.22 45.28 7.47 17.07 8 I1_AR1 ActiveIntronRegion 0 2.88 1.66 16.64 3.04 4.00 1.25 2.70 1.05 0.50 1.16 0.79 1.45 3.53 0.68 2.34 2.43 1.80 3.00 1.73 3.18 0.60 0.00 0.40 9 ER2a ExonRegion 0 0.86 0.87 9.50 5.68 9.22 8.46 11.97 0.77 6.29 1.82 40.99 26.53 15.19 26.88 12.73 40.55 32.67 7.99 8.42 10.62 19.54 24.41 22.72 10 E2a_E3a KnownJunction 0 0.00 0.00 13.60 4.66 11.97 7.33 16.08 5.91 0.00 0.00 6.90 12.60 0.00 4.77 8.90 6.84 3.83 3.73 0.00 8.31 11.92 16.59 8.19 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 2.06 15.11 10.22 3.75 0.00 5.12 0.00 14.64 29.71 20.45 12.60 17.31 0.00 20.85 1.91 0.00 2.62 9.02 5.76 0.00 12 ER3a ExonRegion 0 3.60 0.00 8.18 7.03 7.26 6.29 20.53 3.97 4.30 1.04 18.00 11.25 15.41 10.46 2.86 14.63 15.43 10.63 3.76 12.08 8.50 8.93 9.27 13 E3a_E4a KnownJunction 0 10.37 0.00 4.49 5.43 3.40 5.62 14.88 0.00 1.71 1.13 23.43 7.35 26.78 2.47 0.00 25.29 12.34 14.76 3.95 14.89 6.18 2.51 20.91 14 ER4a ExonRegion 1 5.61 8.76 22.23 17.83 21.65 36.76 49.92 10.92 16.61 16.42 77.57 90.56 60.34 89.80 27.45 71.23 66.81 21.48 26.55 42.22 45.09 42.67 65.55 15 E4a_E5a KnownJunction 1 3.78 24.60 37.28 26.40 11.46 33.22 42.35 14.91 20.57 29.31 86.02 162.65 113.47 86.82 13.72 64.60 66.11 19.07 17.98 22.37 53.44 49.48 56.25 16 ER5a ExonRegion 1 10.57 23.07 38.20 21.06 19.13 17.75 36.57 13.30 20.68 22.05 80.06 110.61 83.54 102.59 26.52 49.77 71.10 20.22 14.52 36.97 69.99 29.22 46.70 17 E5a_E6a KnownJunction 1 9.26 21.18 58.19 12.19 43.38 14.25 47.87 16.63 15.16 26.67 80.13 95.73 78.40 104.89 28.80 34.35 55.82 13.06 19.01 31.58 44.05 28.72 31.50 18 ER6a ExonRegion 1 5.82 19.12 41.98 26.43 35.95 35.69 63.15 16.88 19.49 25.94 66.34 143.18 58.32 99.02 24.82 67.43 67.38 25.53 33.72 37.52 57.12 57.60 41.41 19 E6a_E7a KnownJunction 1 6.59 22.36 50.29 32.43 52.29 79.95 55.87 22.47 22.45 20.07 79.18 133.84 54.87 101.95 21.01 49.65 97.05 22.18 33.13 30.62 32.93 75.19 38.16 20 ER7a ExonRegion 1 14.74 18.30 33.74 33.66 18.43 29.79 50.62 14.97 20.13 30.49 76.59 136.40 52.38 83.77 27.11 44.11 64.32 15.28 25.48 41.04 27.41 52.07 19.79 21 E7a_E8a KnownJunction 0 3.48 35.13 24.51 37.19 15.28 21.52 42.93 11.58 15.65 30.54 45.43 131.14 75.48 89.53 38.94 49.39 62.93 8.87 46.78 33.36 27.49 58.91 23.47 22 ER8a ExonRegion 1 10.09 26.62 31.59 28.77 46.11 33.48 63.18 20.40 26.98 26.71 61.62 133.42 111.36 70.49 33.93 52.29 58.36 15.31 23.34 50.16 19.45 66.04 35.92 23 E8a_E9a KnownJunction 1 13.11 23.75 32.20 23.64 44.23 45.71 66.38 12.28 33.25 24.85 38.48 141.35 79.05 68.10 22.87 45.46 66.76 22.05 17.04 35.86 20.08 63.44 35.60 24 ER9a ExonRegion 1 11.49 17.11 43.44 26.30 22.96 34.38 52.52 14.28 25.59 25.56 50.88 172.42 92.76 90.59 30.70 50.03 66.35 19.46 12.69 39.95 30.28 57.73 40.01 25 E9a_E10a KnownJunction 1 23.93 15.19 36.19 23.47 32.00 34.87 77.68 17.29 27.75 27.21 55.59 217.42 133.43 101.71 40.05 103.82 83.22 31.30 8.85 72.80 44.42 74.95 49.08 26 ER10a ExonRegion 0 11.32 15.52 37.65 20.07 27.01 36.47 55.44 14.23 27.86 24.19 64.30 138.54 85.18 86.43 34.54 62.59 79.33 21.86 13.61 39.55 44.11 39.32 40.91 27 E10a_E11a KnownJunction 1 9.71 5.99 26.55 17.21 11.88 66.16 41.47 2.42 22.02 20.09 89.44 138.04 51.78 101.12 32.63 49.56 75.08 13.60 17.04 39.05 28.05 40.60 41.74 28 ER11a ExonRegion 1 9.09 8.28 35.80 18.88 5.42 37.35 43.46 9.19 23.68 25.37 86.46 138.33 48.96 93.96 22.22 69.95 90.65 18.57 30.46 44.73 28.97 41.92 35.74 29 E11a_E12a KnownJunction 1 19.34 17.96 36.37 13.15 4.16 19.59 48.36 16.18 22.14 21.79 92.34 155.90 38.96 101.42 19.04 82.20 103.41 15.96 43.30 49.15 21.13 52.97 28.26 30 ER12a ExonRegion 1 10.51 17.12 29.90 23.06 29.34 24.39 48.21 19.13 23.36 26.47 97.77 168.06 29.47 74.47 13.59 66.97 90.50 30.15 32.23 40.11 36.25 45.04 32.11 31 E12a_E13a KnownJunction 1 7.41 15.39 31.67 30.67 57.72 27.71 48.40 23.21 27.14 28.47 68.70 110.44 25.97 71.16 17.80 60.50 74.15 25.12 12.52 24.16 29.90 36.74 41.57 32 ER13a ExonRegion 0 14.31 16.40 41.45 28.96 47.07 40.28 60.65 18.75 26.14 37.33 85.23 114.15 64.05 64.84 30.95 65.55 66.37 17.74 13.77 42.12 17.58 44.83 27.57 33 E13a_E14a KnownJunction 0 31.49 24.80 47.57 32.66 70.29 76.83 96.14 13.88 19.10 35.73 111.61 211.42 80.68 87.06 38.32 56.74 96.87 20.56 42.64 42.50 25.08 63.50 27.40 34 ER14a ExonRegion 0 22.49 16.45 32.52 22.73 53.04 61.56 67.31 12.65 18.06 33.38 81.56 200.78 61.14 81.44 31.03 50.31 55.76 18.11 36.40 44.03 15.62 73.63 40.90 35 E14_Da NovelBoundary 0 8.45 6.58 13.57 8.16 14.60 2.16 27.16 0.00 2.26 4.46 0.00 0.00 13.64 0.00 0.00 0.00 0.00 1.95 0.00 3.26 0.00 0.00 4.27 36 E14a_E15a KnownJunction 0 9.48 14.67 27.23 11.89 37.69 50.08 50.21 14.62 22.86 33.34 60.59 154.85 48.21 70.81 32.39 41.95 43.48 6.76 19.20 49.15 16.99 55.23 41.66 37 E14a_E18a NovelJunction 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 4.67 4.53 0.00 0.00 9.83 0.00 12.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 I14_SR1 SilentIntronRegion 0 6.01 0.93 20.06 11.90 5.63 1.34 18.43 4.72 3.03 3.60 1.42 3.38 6.62 1.02 5.22 6.80 3.93 3.70 2.92 3.12 2.42 0.00 2.42 39 I14_AR1 ActiveIntronRegion 0 2.43 4.01 26.52 13.83 4.93 1.78 8.18 5.25 4.96 4.96 1.53 3.67 7.10 0.93 5.19 2.89 5.61 7.79 6.77 6.72 2.18 1.46 5.71 40 ER15a ExonRegion 0 10.74 10.43 34.33 20.44 21.98 59.47 47.36 11.20 18.96 32.87 72.69 151.75 81.93 75.20 35.37 43.19 45.84 7.67 20.81 37.52 18.35 56.39 31.34 41 E15a_E16a KnownJunction 0 6.67 8.35 35.21 32.06 22.41 42.65 68.41 13.06 16.44 32.31 97.08 165.20 82.46 82.64 38.57 28.03 65.64 4.64 4.80 42.89 26.19 62.64 20.74 42 ER16a ExonRegion 0 12.78 14.90 37.14 23.65 56.91 41.24 61.07 16.17 21.91 33.57 93.82 187.44 76.71 75.01 44.45 38.70 69.99 15.49 18.90 37.94 30.54 60.82 33.35 43 E16a_E17a KnownJunction 0 16.23 8.35 25.34 18.75 45.42 33.28 65.63 14.38 13.45 34.97 73.65 204.52 106.32 69.22 42.52 51.27 53.11 9.37 14.21 43.27 31.82 34.35 22.71 44 ER17a ExonRegion 0 9.75 13.13 30.98 26.54 30.08 46.88 46.35 19.32 20.86 26.25 75.78 141.45 63.08 63.86 40.58 60.06 66.35 15.76 24.21 47.98 29.23 47.47 32.79 45 E17a_E18a KnownJunction 1 9.41 17.63 40.60 16.65 58.66 38.90 59.13 15.44 36.54 18.94 50.59 166.70 97.40 59.45 24.35 74.94 42.54 9.58 17.04 64.24 36.26 52.29 48.40 46 ER18a ExonRegion 0 12.78 19.54 36.04 23.81 38.45 57.14 46.31 17.79 35.21 18.72 71.75 145.47 77.95 70.96 36.53 75.61 64.33 22.80 42.62 39.89 46.87 39.73 33.01 47 E18a_E19a KnownJunction 0 14.22 27.96 42.46 22.11 45.67 15.79 49.20 8.21 33.74 22.62 82.65 102.78 40.91 96.42 51.55 71.78 65.73 22.22 29.74 29.21 37.93 53.70 52.24 48 ER19a ExonRegion 0 13.88 18.11 32.69 20.60 17.38 35.22 39.63 7.69 31.08 21.25 69.75 115.13 49.72 88.07 42.65 61.17 74.64 18.72 31.10 47.81 58.17 45.23 43.95 49 E19a_E20a KnownJunction 0 16.15 23.75 27.53 22.31 21.05 19.31 39.97 16.35 24.45 26.84 69.18 94.08 84.25 70.52 51.30 67.33 49.28 24.04 27.39 32.73 48.68 29.09 27.91 50 ER20a ExonRegion 0 11.57 15.56 30.22 18.31 21.32 34.06 47.09 7.27 34.50 18.82 76.12 80.24 73.97 84.51 45.51 55.05 68.03 27.39 33.72 22.32 51.36 33.83 38.97 51 E20a_E21a KnownJunction 0 9.41 14.54 34.21 24.67 20.54 49.23 54.45 4.64 29.54 14.16 86.39 89.28 39.93 103.30 55.26 54.69 64.24 39.26 41.04 36.62 49.73 48.74 59.07 52 ER21a ExonRegion 0 10.56 6.04 25.20 24.08 21.82 43.61 43.17 11.59 29.05 26.24 102.04 81.98 48.45 108.92 61.33 75.64 86.88 33.55 36.94 41.66 63.12 49.70 56.20 53 E21a_E22a KnownJunction 0 14.37 5.66 31.46 31.10 4.33 39.35 53.44 28.46 39.58 29.74 138.51 78.33 91.71 106.72 49.20 73.40 101.54 31.88 40.85 38.73 63.32 64.05 88.18 54 ER22a ExonRegion 0 17.32 17.24 32.10 26.26 32.06 49.92 44.52 14.87 29.46 28.11 107.55 73.56 52.15 86.29 45.75 54.97 83.31 21.44 25.78 40.25 60.51 48.25 40.12 55 E22a_E23a KnownJunction 0 20.23 17.83 32.05 30.40 66.64 76.32 28.26 18.98 36.69 26.51 98.55 70.52 62.17 69.99 38.07 64.43 114.17 25.16 32.38 40.91 70.61 42.37 48.49 56 E23_Aa NovelBoundary 0 7.04 6.71 29.39 10.69 0.00 2.33 8.21 2.38 4.22 9.24 0.00 0.00 0.00 0.00 8.90 0.00 0.00 11.98 13.08 8.82 0.00 0.00 3.41 57 ER23a ExonRegion 0 33.39 21.50 49.23 28.50 31.93 47.38 56.97 16.87 27.39 27.40 96.72 87.22 56.23 103.50 64.02 68.13 91.91 23.46 37.30 56.21 51.31 53.38 47.27 58 E23_Da NovelBoundary 0 7.26 12.17 23.33 24.44 0.00 2.90 16.74 13.92 1.77 11.44 0.00 0.00 0.00 0.00 8.90 3.42 0.00 19.86 0.00 0.00 0.00 0.00 0.00 59 E23a_E24a KnownJunction 0 6.74 9.41 37.31 36.29 43.63 75.98 69.60 10.60 20.78 19.56 61.44 137.29 81.49 109.54 63.79 43.66 66.29 17.49 21.46 47.75 41.39 50.21 66.92 60 ER24a ExonRegion 0 16.34 18.76 46.81 39.97 29.49 64.56 66.33 11.46 28.23 22.62 70.97 104.37 74.54 69.92 40.11 47.67 74.54 13.06 13.14 50.59 36.50 57.77 43.65 61 E24a_E25a KnownJunction 0 29.93 8.62 56.98 44.52 65.45 49.18 68.81 10.60 29.86 31.43 74.76 60.32 105.67 57.92 63.04 27.00 45.91 6.76 12.89 50.24 13.96 76.42 51.30 62 ER25a ExonRegion 0 37.05 23.98 80.11 54.45 53.55 71.77 71.55 16.93 35.86 34.37 87.40 123.22 63.61 78.84 75.40 35.26 73.23 11.60 31.30 45.61 24.54 66.74 33.21 63 E25a_E26a KnownJunction 0 62.16 39.60 57.95 67.82 55.26 91.03 81.35 19.06 45.37 35.05 71.54 150.50 99.83 111.19 67.37 28.11 66.39 19.69 52.61 46.85 19.71 48.19 32.86 64 E26_Aa NovelBoundary 1 2.82 0.00 3.22 1.66 3.40 0.00 14.71 1.52 0.00 1.02 0.00 0.00 25.97 0.00 4.45 0.00 0.00 0.00 0.00 3.20 0.00 0.00 4.35 65 ER26a ExonRegion 0 38.93 27.34 63.11 59.50 46.92 65.72 76.84 17.38 40.65 39.14 108.31 119.06 77.80 71.06 69.01 63.58 62.13 11.28 28.33 49.16 15.31 54.51 35.29 66 E26a_E27a KnownJunction 0 48.30 37.16 73.06 58.30 56.20 67.18 93.85 21.40 25.35 28.74 104.76 97.83 67.37 50.15 34.98 43.41 57.13 3.77 39.15 38.22 21.68 72.62 52.24 67 ER27a ExonRegion 0 45.78 26.30 70.09 57.76 53.94 70.89 76.44 25.74 35.04 24.72 86.37 92.17 81.71 53.40 70.39 47.67 42.09 15.71 34.28 34.32 25.78 62.75 42.19 68 E27a_E28a KnownJunction 0 76.68 18.29 64.22 49.48 60.19 33.39 59.35 28.92 39.53 28.37 59.23 78.48 66.72 48.80 77.63 53.23 35.53 31.42 17.51 45.38 21.87 53.70 50.11 69 ER28a ExonRegion 0 58.00 16.43 65.44 52.91 42.70 45.70 78.61 30.65 31.60 38.30 76.04 140.36 56.41 74.56 108.44 50.00 48.62 31.31 56.48 52.76 32.49 61.89 46.95 70 E28_Da NovelBoundary 1 0.00 3.35 3.08 1.30 0.00 0.00 16.16 2.55 1.71 1.67 2.42 18.91 27.76 2.35 0.00 0.00 4.11 0.00 0.00 3.07 0.00 2.69 0.00 71 E28a_E29a KnownJunction 0 63.94 23.81 71.64 62.66 65.37 67.01 104.14 34.09 27.69 32.50 111.61 117.64 45.78 103.42 95.06 58.70 66.85 22.47 58.45 50.49 34.90 51.62 30.73 72 ER29a ExonRegion 0 38.34 24.12 57.71 52.87 44.87 61.92 86.21 31.47 26.54 34.78 95.61 106.73 80.71 92.42 73.75 70.09 65.02 28.15 51.41 47.25 37.62 45.89 44.80 73 E29a_E30a KnownJunction 0 42.53 22.56 55.17 48.05 58.57 46.17 86.65 37.54 31.42 34.95 68.75 80.58 58.11 68.63 105.20 69.13 56.29 26.86 54.12 44.36 50.53 39.86 45.33 74 ER30a ExonRegion 0 30.67 17.57 41.85 30.99 45.03 51.55 54.81 20.15 16.73 26.23 53.17 56.94 59.73 47.83 78.28 39.65 37.62 19.52 30.23 29.35 30.31 31.21 33.36 75 E30a_E31a KnownJunction 0 24.30 24.40 33.12 20.68 41.17 36.46 66.55 12.03 16.61 15.96 38.54 43.06 19.80 40.61 87.64 26.23 39.27 14.01 17.51 24.10 18.66 42.62 20.57 76 I30 Intron 0 11.24 5.80 13.38 10.78 8.13 4.63 15.07 5.53 7.35 3.73 2.95 9.53 14.35 3.76 4.95 7.34 5.56 3.22 4.23 7.47 2.17 1.66 3.22 77 I30_AR3 ActiveIntronRegion 0 83.42 27.54 46.85 36.62 27.18 10.04 21.96 20.17 18.08 12.13 4.20 9.74 20.36 4.50 13.41 8.69 4.69 2.20 6.23 9.89 1.85 2.89 5.97 78 I30_SR4 SilentIntronRegion 0 0.00 8.13 7.35 0.00 24.08 14.67 30.45 0.00 6.18 2.29 0.00 17.32 4.69 0.00 0.00 0.00 9.90 3.70 0.00 0.00 0.00 0.00 11.75 79 I30_AR4 ActiveIntronRegion 1 10.30 9.03 22.08 20.42 49.45 25.60 74.45 9.97 7.93 7.68 0.00 23.06 45.73 6.68 11.77 6.29 5.65 4.65 6.06 3.03 0.38 1.96 4.40 80 I30_SR5 SilentIntronRegion 0 10.94 6.43 16.52 10.47 9.41 5.83 17.07 7.53 9.71 4.75 3.23 10.72 16.86 4.16 5.03 8.76 5.97 3.76 5.01 8.29 2.58 2.07 4.02 81 E31_Aa NovelBoundary 0 44.97 23.48 40.21 47.98 48.81 47.81 52.33 15.12 24.51 9.75 5.00 5.40 0.00 9.59 15.45 15.21 17.67 11.94 9.60 18.54 9.45 2.82 0.00 82 ER31a ExonRegion 0 57.14 38.91 86.76 62.72 63.90 62.13 63.87 27.60 29.47 33.55 41.58 72.12 38.62 45.70 61.42 23.60 31.66 13.65 19.21 26.47 19.97 40.14 24.91 83 IG31_AR1 ActiveIntergenicRegion 0 0.00 1.06 3.26 1.06 0.00 0.95 0.69 0.00 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 1.43 0.00 2.21 7.98 1.08 4.46