Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCBE1 Gene 0 4.90 4.07 3.04 17.05 39.19 4.66 15.48 94.25 118.93 27.94 1.35 2.21 2.38 1.74 3.26 2.78 2.83 4.81 5.36 5.81 31.25 9.59 9.27 2 439986 Transcript 0 0.00 0.00 0.00 8.23 7.70 0.74 2.93 60.04 70.71 14.51 0.00 0.00 0.00 0.00 0.00 0.00 0.84 0.85 0.00 1.00 31.68 6.17 1.75 3 333570 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398179 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.00 0.00 1.06 1.47 0.00 1.25 28.17 29.35 5.28 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.13 0.00 0.00 17.33 0.33 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 4.96 8.57 0.00 2.25 86.67 91.41 19.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 45.59 3.12 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 16.44 5.15 0.34 3.73 71.08 82.87 18.95 0.00 0.00 0.00 0.00 0.00 0.00 2.08 1.60 0.00 0.87 30.39 12.35 3.23 8 E2a_E3b KnownJunction 0 0.00 0.00 0.00 10.45 15.62 2.61 4.50 54.26 79.19 14.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 33.42 8.88 3.76 9 I2 Intron 0 0.37 0.24 0.16 3.95 6.09 0.14 4.10 19.32 13.79 3.22 0.00 0.06 0.20 0.01 0.03 0.03 0.03 0.36 0.26 0.79 1.25 0.12 0.56 10 I2_SR1 SilentIntronRegion 0 0.45 0.20 0.21 5.35 8.89 0.21 6.64 25.64 19.29 5.14 0.01 0.07 0.40 0.02 0.03 0.12 0.04 0.27 0.02 0.20 1.43 0.11 0.85 11 I2_AR2 ActiveIntronRegion 0 0.97 0.31 0.00 15.19 19.36 0.39 7.79 57.35 41.91 10.47 0.00 0.00 0.00 0.00 0.00 0.20 0.35 0.48 0.34 0.41 3.16 0.81 0.66 12 I2_SR2 SilentIntronRegion 0 0.82 0.76 0.11 9.81 21.02 0.33 5.81 31.96 23.02 4.91 0.00 0.00 0.69 0.00 0.06 0.00 0.00 0.17 0.09 0.20 1.56 0.27 1.13 13 I2_SR3 SilentIntronRegion 0 0.87 0.91 0.17 7.74 13.36 0.35 7.20 39.63 36.40 8.37 0.00 0.23 0.98 0.09 0.07 0.00 0.10 0.82 0.30 1.62 2.10 0.20 1.40 14 I2_AR4 ActiveIntronRegion 0 0.96 0.11 0.50 11.81 17.74 0.71 9.09 54.16 54.84 11.05 0.00 0.54 1.29 0.00 0.31 0.00 0.50 1.50 1.32 1.45 3.96 0.31 1.77 15 I2_SR4 SilentIntronRegion 0 0.30 0.27 0.22 5.22 7.02 0.23 5.15 22.58 17.32 4.30 0.00 0.06 0.26 0.01 0.06 0.04 0.04 0.55 0.36 1.37 1.61 0.16 1.15 16 I2_AR5 ActiveIntronRegion 0 0.33 0.47 0.00 5.71 7.75 0.85 6.96 62.73 31.82 7.64 0.00 0.00 1.02 0.00 0.00 0.00 0.00 1.91 1.47 1.96 3.30 0.00 0.65 17 I2_SR5 SilentIntronRegion 0 0.93 0.56 0.45 6.36 10.74 0.30 5.47 33.04 21.04 5.75 0.00 0.02 0.11 0.00 0.03 0.00 0.09 0.45 0.31 1.31 1.82 0.17 0.56 18 I2_AR6 ActiveIntronRegion 0 7.08 2.45 0.00 13.49 17.25 0.00 12.42 145.19 63.37 17.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.15 2.66 0.00 1.32 19 I2_AR7 ActiveIntronRegion 0 6.15 0.33 0.59 9.87 24.65 0.30 5.01 72.99 34.16 10.22 0.00 0.58 0.00 0.00 0.00 0.00 0.00 1.95 1.03 1.35 3.56 0.34 2.84 20 I2_SR6 SilentIntronRegion 0 0.37 0.29 0.17 3.53 5.96 0.07 3.96 24.00 15.67 3.31 0.00 0.04 0.13 0.01 0.05 0.01 0.01 0.36 0.37 1.07 1.35 0.06 0.45 21 I2_AR10 ActiveIntronRegion 0 0.13 0.70 0.00 7.09 2.91 0.00 1.45 21.03 13.70 1.55 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 2.18 1.43 0.00 0.00 22 I2_SR9 SilentIntronRegion 0 0.80 0.56 0.26 4.63 6.59 0.11 3.79 22.07 13.29 3.29 0.03 0.10 0.11 0.00 0.03 0.04 0.00 0.60 0.47 0.68 1.74 0.09 0.42 23 ER3a ExonRegion 0 0.00 0.00 0.00 3.63 7.14 0.61 0.88 23.62 39.52 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.71 9.55 2.08 0.98 24 ER3b ExonRegion 0 0.00 0.00 0.00 9.28 25.27 5.01 16.04 68.74 111.73 17.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 2.33 50.39 6.13 4.46 25 E3a_E4a KnownJunction 0 0.00 0.00 0.00 7.06 28.78 11.07 30.16 66.99 113.66 17.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 70.86 8.14 7.60 26 ER4a ExonRegion 0 0.80 1.54 0.83 10.66 16.53 4.78 9.24 63.15 99.38 22.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.09 7.74 4.19 47.99 8.24 2.46 27 E4a_E5a KnownJunction 0 0.00 0.00 1.36 8.96 22.50 0.00 1.90 64.65 120.22 31.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 8.56 0.00 47.88 11.51 4.35 28 ER5a ExonRegion 0 0.71 0.74 0.49 11.53 15.23 1.81 7.25 74.33 112.02 30.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.71 4.79 2.24 49.48 13.60 7.43 29 E5a_E6a KnownJunction 0 0.00 0.00 0.00 24.81 20.80 5.79 8.74 69.33 108.16 39.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.01 59.43 10.29 8.19 30 ER6a ExonRegion 0 0.19 1.63 0.00 15.15 29.46 3.10 6.76 67.62 107.76 27.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 6.81 3.83 55.16 12.07 9.07 31 E6a_E7a KnownJunction 0 2.96 3.09 0.00 10.29 36.42 8.57 12.50 77.59 120.63 23.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.97 12.71 2.88 48.80 15.68 8.02 32 ER7a ExonRegion 0 2.52 0.27 0.00 9.70 10.68 1.30 7.66 75.94 87.92 24.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.87 2.55 1.35 50.10 10.95 8.15 33 E7a_E8a KnownJunction 0 0.00 0.00 0.00 2.66 3.40 0.00 3.71 47.19 63.69 16.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.93 0.00 2.75 39.48 5.02 0.00 34 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 35 E8_Aa NovelBoundary 0 0.00 0.00 0.00 3.60 0.00 0.00 0.00 29.90 11.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER8a ExonRegion 0 1.69 0.00 0.00 6.36 12.75 3.16 8.96 53.95 67.02 15.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 3.39 0.61 40.23 6.18 2.33 37 E8a_E9a KnownJunction 0 3.04 0.00 0.00 2.90 34.55 5.62 10.73 50.97 46.82 17.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 31.82 0.00 0.00 38 ER9a ExonRegion 0 3.12 1.47 0.95 2.84 22.97 3.31 8.13 48.73 56.30 19.78 0.00 0.00 0.52 0.00 0.00 0.00 0.00 5.29 1.42 2.25 31.95 3.13 5.14 39 E9a_E10a KnownJunction 0 3.56 3.35 1.74 3.76 26.99 0.00 6.40 37.58 49.51 16.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 4.42 2.88 30.83 5.76 12.55 40 ER10a ExonRegion 0 2.29 1.41 2.31 6.93 17.47 0.00 7.32 55.26 75.79 24.75 0.00 0.00 4.69 0.00 0.00 0.00 0.00 5.70 3.10 4.26 34.89 3.07 8.16 41 E10a_E11a KnownJunction 0 0.00 0.00 1.83 10.29 16.04 0.00 6.67 64.03 81.74 26.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 6.07 50.23 0.00 3.33 42 I10 Intron 0 0.50 0.40 0.15 5.01 8.61 0.44 2.94 20.98 18.21 2.10 0.00 0.00 0.00 0.00 0.16 0.00 0.00 0.58 0.13 0.34 2.36 0.08 0.47 43 I10_SR1 SilentIntronRegion 0 0.51 0.40 0.15 5.01 8.62 0.44 2.95 21.01 18.23 2.11 0.00 0.00 0.00 0.00 0.16 0.00 0.00 0.59 0.13 0.34 2.37 0.08 0.47 44 E11_Aa NovelBoundary 0 2.82 0.00 0.00 3.16 16.04 0.00 0.00 32.74 25.75 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 0.00 3.41 45 ER11a ExonRegion 0 3.66 0.55 4.18 15.83 25.49 1.33 12.52 90.49 127.54 36.67 0.00 0.78 0.04 0.29 0.00 0.00 0.00 4.51 4.97 3.20 49.35 6.95 9.22 46 E11_Da KnownBoundary 0 0.00 2.83 1.45 23.41 55.69 8.01 26.45 87.94 148.58 34.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.36 14.31 0.00 44.17 6.00 4.35 47 ER11b ExonRegion 0 7.00 6.19 4.27 21.08 53.22 6.23 19.97 111.23 135.45 30.52 2.18 3.48 3.74 2.77 5.25 4.49 4.39 6.05 6.35 8.01 24.01 10.54 11.54 48 IG11_SR8 SilentIntergenicRegion 0 2.48 2.38 0.00 20.64 54.38 3.22 12.16 83.04 114.02 23.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.41 3.11 1.66 20.23 5.70 1.72 49 IG11_AR11 ActiveIntergenicRegion 0 5.42 3.30 1.29 35.71 78.46 6.04 15.29 159.45 160.70 32.25 0.00 0.18 0.00 0.00 0.07 0.00 0.00 1.63 3.15 1.56 12.40 8.76 3.13