Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC68 Gene 0 8.33 2.02 0.45 0.50 190.32 0.74 190.74 26.46 19.14 53.58 0.00 1.21 0.04 0.03 0.07 0.00 0.51 4.88 0.68 2.67 0.62 6.01 11.97 2 337363 Transcript 0 2.35 0.00 0.00 0.00 52.96 0.00 49.68 12.25 3.97 14.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.34 0.00 0.00 0.36 0.76 5.81 3 432185 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 4.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 423029 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 4.83 0.00 0.00 0.00 66.17 0.00 112.00 3.52 2.07 8.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.98 0.00 0.00 0.65 2.30 4.99 6 E1a_E3a KnownJunction 0 2.96 0.00 0.00 0.00 125.30 0.00 58.38 18.15 3.85 15.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 3.67 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 8.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 3.95 0.00 0.00 0.00 35.26 0.00 37.59 16.52 3.40 23.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 1.18 1.48 7.57 10 E3a_E4c KnownJunction 0 0.00 0.00 0.00 0.00 28.69 0.00 37.80 21.32 10.53 27.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.02 0.00 0.00 0.00 0.00 12.80 11 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER4b ExonRegion 0 0.05 0.00 0.00 0.00 0.36 0.00 17.30 0.47 0.11 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.05 0.00 1.33 13 E4_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 20.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.84 14 ER4c ExonRegion 0 1.82 0.00 0.00 0.00 113.89 0.00 170.19 21.38 11.71 33.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.51 1.27 0.00 0.91 7.05 13.60 15 E4a_E5a KnownJunction 0 3.11 0.00 0.00 0.00 539.73 0.00 634.97 25.26 18.20 47.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 16.22 16 ER5a ExonRegion 0 1.95 0.00 0.00 0.00 215.20 0.00 264.06 20.21 17.72 44.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.90 1.57 0.00 2.58 1.84 14.14 17 E5a_E6a KnownJunction 0 7.19 0.00 0.00 0.00 112.22 0.00 118.27 28.18 16.00 55.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.46 8.28 0.00 0.00 0.00 24.24 18 ER6a ExonRegion 0 2.58 0.00 0.00 0.00 76.91 0.00 100.96 20.41 12.88 44.85 0.00 1.29 0.00 0.00 0.00 0.00 1.19 3.88 1.40 0.00 4.09 2.26 16.60 19 E6_Da NovelBoundary 0 0.00 0.00 0.00 0.00 43.72 0.00 63.55 0.00 0.00 30.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 2.97 6.25 0.00 20 E6a_E7a KnownJunction 0 3.63 0.00 0.00 0.00 64.86 0.00 77.86 28.83 19.30 41.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.73 0.00 0.00 0.00 0.00 3.84 21 I6 Intron 0 2.42 0.27 0.00 0.14 37.76 0.00 60.49 5.02 2.23 8.38 0.00 0.24 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.44 0.56 3.16 22 I6_AR1 ActiveIntronRegion 0 1.47 0.00 0.00 0.00 37.04 0.00 60.49 4.76 0.85 13.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 0.51 0.96 2.71 23 I6_SR1 SilentIntronRegion 0 1.89 0.48 0.00 0.00 31.51 0.00 45.57 3.24 1.52 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 3.44 24 I6_AR2 ActiveIntronRegion 0 3.45 0.33 0.00 0.33 42.76 0.00 71.10 6.45 3.68 8.89 0.00 0.57 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.71 0.28 3.30 25 E7_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 27.76 0.00 62.40 6.98 1.65 7.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 0.00 0.00 8.82 8.02 26 ER7a ExonRegion 0 15.44 1.65 0.00 0.00 155.38 0.00 198.59 20.63 17.62 44.73 0.00 2.89 0.00 0.54 0.00 0.00 1.34 8.09 1.21 0.00 3.45 5.03 14.54 27 E7a_E8a KnownJunction 0 2.96 0.00 0.00 0.00 186.84 0.00 217.72 28.26 17.48 52.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.59 0.00 0.00 0.00 5.76 22.54 28 ER8a ExonRegion 0 3.31 0.00 0.00 0.00 210.97 0.00 248.27 29.05 19.02 64.47 0.00 4.03 0.00 0.53 0.00 0.00 1.31 9.91 0.17 0.00 1.02 8.69 22.54 29 E8a_E9a KnownJunction 0 2.82 0.00 0.00 0.00 269.27 0.00 227.00 24.36 18.00 60.49 0.00 5.55 0.00 0.00 0.00 0.00 0.00 4.15 3.58 0.00 2.47 14.45 16.48 30 ER9a ExonRegion 0 9.64 2.50 0.00 0.00 169.89 1.08 196.39 21.60 16.71 58.74 0.00 2.19 0.00 0.00 0.00 0.00 0.00 10.71 1.69 0.10 1.12 3.19 22.47 31 E9a_E10a KnownJunction 0 3.78 0.00 0.00 0.00 165.03 0.00 162.61 20.00 19.24 60.76 0.00 5.55 0.00 0.00 0.00 0.00 0.00 9.62 0.00 0.00 0.00 0.00 31.84 32 I9_AR1 ActiveIntronRegion 0 3.01 0.32 0.00 0.00 43.94 0.00 22.58 4.47 0.58 5.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.00 0.00 0.35 0.00 0.93 33 ER10a ExonRegion 0 5.33 0.00 0.00 0.00 131.62 0.03 160.87 24.80 17.94 57.94 0.00 1.96 0.00 0.00 0.00 0.00 0.00 15.71 0.60 3.51 0.00 3.68 17.34 34 E10a_E11a KnownJunction 0 19.48 0.00 0.00 0.00 149.41 0.00 195.64 17.00 15.60 51.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.88 4.80 3.26 0.00 3.12 15.19 35 ER11a ExonRegion 0 5.42 0.00 0.00 0.00 185.96 3.34 257.45 41.26 23.01 51.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.68 1.18 2.94 0.00 7.66 19.79 36 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 148.56 0.00 205.75 26.90 29.75 38.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 0.00 6.14 0.00 10.78 15.79 37 ER12a ExonRegion 0 5.74 2.88 0.00 0.00 143.66 0.00 189.52 25.70 19.94 53.95 0.00 0.00 0.00 0.00 0.00 0.00 2.19 5.26 0.00 7.85 0.00 5.93 15.22 38 E12a_E13a KnownJunction 0 16.60 0.00 0.00 0.00 149.07 0.00 183.32 22.10 14.76 55.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.91 0.00 7.99 0.00 0.00 11.35 39 ER13a ExonRegion 0 10.10 2.78 0.67 0.75 227.63 0.97 211.10 30.47 22.60 61.88 0.00 1.29 0.06 0.00 0.11 0.00 0.52 4.33 0.67 3.54 0.31 7.06 11.53 40 ER13b ExonRegion 0 0.00 0.00 0.00 0.00 9.37 0.00 2.65 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 IG30_SR2 SilentIntergenicRegion 0 0.00 0.20 0.00 0.20 18.53 0.00 14.40 5.20 0.71 3.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.26 0.00 0.00 0.21 0.40 0.57