Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NETO1 Gene 0 3.29 21.71 6.20 13.78 42.01 34.13 61.42 46.04 103.45 40.50 3.05 0.15 0.24 1.41 0.00 0.00 0.00 0.26 29.49 0.93 5.92 5.87 3.37 2 327305 Transcript 0 2.27 14.75 4.02 9.77 30.06 24.70 39.91 34.28 75.34 31.60 2.51 0.04 0.04 1.43 0.00 0.00 0.00 0.17 23.94 0.87 6.05 3.72 2.31 3 407964 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 397929 Transcript 0 0.25 0.49 1.74 1.01 1.65 3.61 11.33 14.85 8.54 4.93 0.15 0.14 0.00 0.05 0.00 0.00 0.00 0.00 1.33 0.00 0.09 0.50 0.00 5 299430 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 IG19_AR4 ActiveIntergenicRegion 0 0.05 0.46 3.36 5.14 11.40 4.24 8.15 20.50 33.44 7.67 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.06 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.49 2.37 1.58 1.11 3.25 6.18 10.46 14.49 32.07 13.76 3.82 0.00 0.00 2.30 0.00 0.00 0.00 0.18 26.08 0.96 10.62 2.28 3.24 8 E1a_E3a KnownJunction 0 3.19 21.11 14.52 9.16 11.12 37.31 65.85 58.33 132.17 40.00 7.42 0.00 0.00 9.30 0.00 0.00 0.00 0.00 88.66 0.00 38.98 0.00 3.50 9 ER1b ExonRegion 0 0.94 14.16 11.07 10.80 7.43 30.16 49.53 59.41 140.44 38.61 6.01 0.00 1.56 5.17 0.00 0.00 0.00 0.82 75.27 0.71 26.61 3.24 5.33 10 ER2a ExonRegion 0 0.00 0.02 0.00 1.63 3.22 0.00 1.60 2.07 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 1.53 24.03 9.83 6.97 18.04 28.02 61.34 43.40 114.61 39.80 15.43 0.00 6.51 6.38 0.00 0.00 0.00 0.00 65.77 1.97 32.93 2.35 8.16 13 E3a_E4a KnownJunction 0 0.00 24.60 8.96 7.82 23.34 17.04 96.80 38.08 105.18 36.05 18.69 0.00 0.00 4.94 0.00 0.00 0.00 0.00 57.23 0.00 32.49 8.14 20.06 14 ER4a ExonRegion 0 2.07 22.09 13.27 10.33 35.52 29.78 80.05 50.96 137.09 43.49 11.44 0.88 0.44 9.76 0.00 0.00 0.00 1.91 99.88 1.57 30.05 13.11 12.87 15 E4_Da NovelBoundary 0 0.00 0.00 1.60 0.00 4.33 0.00 7.64 3.45 1.71 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.40 0.00 0.00 0.00 0.00 16 E4a_E5a KnownJunction 0 3.63 29.86 13.07 5.16 38.37 20.05 101.27 52.21 112.59 47.76 11.32 6.30 7.14 4.65 0.00 0.00 0.00 1.66 78.21 0.00 16.93 14.57 0.00 17 ER5a ExonRegion 0 1.89 26.86 4.13 10.92 45.55 42.20 104.08 61.22 122.20 44.90 12.13 0.97 0.72 9.50 0.00 0.00 0.00 0.83 74.96 0.65 11.74 18.60 10.44 18 E5_Da NovelBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 17.18 11.91 2.75 5.37 9.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.81 0.00 0.00 3.12 0.00 19 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 4.26 6.01 16.14 6.71 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E5a_E7a KnownJunction 0 0.00 30.72 1.33 5.23 48.22 34.98 43.99 26.21 98.06 50.07 4.16 0.00 0.00 0.00 0.00 0.00 0.00 2.40 67.77 3.26 16.99 5.88 0.00 21 I5_AR2 ActiveIntronRegion 0 1.78 1.82 3.80 2.79 4.92 0.48 12.05 21.92 6.81 1.93 0.46 0.00 0.00 0.19 0.00 0.00 0.00 0.22 5.25 0.25 1.31 0.50 0.53 22 ER6a ExonRegion 0 0.51 0.97 3.49 2.02 3.30 2.95 16.65 13.55 10.37 7.35 0.31 0.28 0.00 0.10 0.00 0.00 0.00 0.00 2.66 0.00 0.18 1.00 0.00 23 ER7a ExonRegion 0 0.00 25.37 1.63 4.32 24.02 29.17 44.23 27.33 87.05 37.71 7.69 0.00 0.00 2.78 0.00 0.00 0.00 1.85 48.69 2.68 18.78 8.88 12.52 24 E7a_E8a KnownJunction 0 0.00 23.75 1.83 3.50 11.88 31.29 60.59 27.56 78.88 23.53 17.21 0.00 0.00 2.47 0.00 0.00 0.00 0.00 49.22 3.26 20.45 14.51 15.19 25 ER8a ExonRegion 0 0.84 12.15 3.52 6.72 24.33 42.22 74.30 43.79 103.83 42.58 7.25 0.00 0.00 3.46 0.00 0.00 0.00 0.20 39.19 0.40 22.05 6.36 9.82 26 E8a_E9a KnownJunction 0 0.00 5.79 1.83 17.15 16.30 53.83 84.70 47.11 106.48 51.39 5.37 0.00 0.00 0.00 0.00 0.00 0.00 1.58 55.53 0.00 27.68 0.00 3.76 27 ER9a ExonRegion 0 2.29 16.39 11.85 9.89 31.62 36.69 65.59 42.29 123.73 52.49 6.94 0.00 0.00 0.82 0.00 0.00 0.00 1.17 45.30 2.84 22.72 5.47 8.95 28 E9_Da NovelBoundary 0 0.00 0.00 0.00 1.56 3.31 0.00 22.66 0.00 5.01 4.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.55 2.88 0.00 2.76 8.71 29 E9a_E10a KnownJunction 0 9.63 20.98 19.69 2.06 45.93 43.27 72.03 55.94 150.64 73.01 10.53 0.00 0.00 4.77 0.00 0.00 0.00 0.00 73.98 0.00 16.74 14.94 8.62 30 E10_Aa NovelBoundary 0 0.00 5.53 0.00 0.00 0.00 2.56 14.40 0.00 13.22 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.40 0.00 2.78 0.00 0.00 31 ER10a ExonRegion 0 10.81 28.76 8.51 8.48 49.78 48.97 77.11 60.30 191.81 60.25 13.62 0.00 1.73 3.40 0.00 0.00 0.00 0.62 79.02 1.94 17.98 10.16 12.42 32 E10a_E11a KnownJunction 0 3.56 34.20 9.17 17.18 37.69 45.26 71.10 61.57 195.83 71.18 11.79 0.00 0.00 10.42 0.00 0.00 0.00 2.57 85.18 0.00 19.89 6.00 12.21 33 ER11a ExonRegion 0 6.32 23.83 8.07 15.91 46.26 48.82 89.91 70.82 200.63 55.54 10.61 0.00 1.06 4.57 0.00 0.00 0.00 0.63 79.35 2.52 30.71 13.15 17.89 34 E11a_E12a KnownJunction 0 0.00 18.68 3.16 10.82 33.53 40.54 50.48 51.59 127.37 44.27 2.32 0.00 0.00 2.47 0.00 0.00 0.00 0.00 40.38 0.00 11.31 5.14 19.29 35 I11 Intron 0 0.35 11.53 3.66 3.39 7.28 6.52 17.72 8.16 17.18 10.35 0.43 0.00 0.95 0.22 0.00 0.00 0.00 0.00 5.13 0.47 1.84 4.52 1.31 36 I11_AR1 ActiveIntronRegion 0 0.00 6.77 3.05 2.99 8.24 8.99 17.92 8.46 18.33 10.17 0.00 0.00 0.66 0.38 0.00 0.00 0.00 0.00 8.72 0.00 1.66 5.28 2.07 37 I11_SR1 SilentIntronRegion 0 0.58 14.69 4.07 3.66 6.68 4.93 17.66 7.99 16.49 10.51 0.71 0.00 1.14 0.12 0.00 0.00 0.00 0.00 2.81 0.78 1.96 4.04 0.81 38 E12_Aa NovelBoundary 0 0.00 5.99 8.99 8.52 14.94 5.11 76.84 13.72 41.70 19.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.71 0.00 5.87 5.69 0.00 39 ER12a ExonRegion 0 0.00 33.00 2.93 12.91 59.04 23.57 80.22 39.24 115.51 36.34 2.88 0.00 0.00 1.57 0.00 0.00 0.00 0.00 30.91 4.46 10.77 12.47 4.77 40 E12_Da NovelBoundary 0 0.00 28.48 2.66 8.99 30.14 21.18 62.62 40.29 109.52 24.04 5.05 0.00 0.00 2.47 0.00 0.00 0.00 0.00 11.48 2.62 11.18 12.86 3.59 41 E12_Db NovelBoundary 0 3.19 11.51 2.96 1.50 40.75 5.79 28.09 11.42 27.78 3.98 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.05 0.00 0.00 7.84 0.00 42 E12b_E13a KnownJunction 0 0.00 8.88 4.91 12.25 31.66 7.04 60.11 46.62 102.52 31.67 2.68 0.00 0.00 12.13 0.00 0.00 0.00 0.00 39.72 2.62 0.00 3.12 4.35 43 ER12b ExonRegion 0 0.00 17.14 4.03 11.97 31.34 10.48 57.88 43.71 102.87 31.46 4.97 0.00 0.00 8.12 0.00 0.00 0.00 0.00 34.58 2.13 2.99 10.86 5.66 44 I12 Intron 0 2.42 22.72 5.59 7.44 25.72 21.05 51.14 21.82 50.43 19.10 2.21 0.00 0.00 0.76 0.00 0.00 0.00 0.00 9.95 0.26 1.32 5.63 0.53 45 I12_AR2 ActiveIntronRegion 0 0.00 11.69 2.60 0.94 7.69 17.54 25.49 12.86 11.66 6.24 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 2.20 4.17 0.00 46 I12_AR3 ActiveIntronRegion 0 2.10 19.40 6.17 7.10 26.84 20.42 57.57 19.43 54.73 17.76 2.42 0.00 0.00 0.91 0.00 0.00 0.00 0.00 8.66 0.56 0.79 6.63 0.00 47 I12_AR4 ActiveIntronRegion 0 4.06 23.65 5.11 6.27 29.25 23.93 51.72 22.53 48.64 24.69 1.59 0.00 0.00 1.42 0.00 0.00 0.00 0.00 11.26 0.00 0.71 5.87 1.03 48 I12_AR5 ActiveIntronRegion 0 0.81 20.72 4.14 5.45 29.94 28.73 45.08 25.27 59.40 24.19 1.56 0.00 0.00 0.31 0.00 0.00 0.00 0.00 10.92 0.00 2.20 3.17 0.00 49 I12_AR6 ActiveIntronRegion 0 3.07 29.59 5.51 9.13 30.64 20.81 46.21 20.14 63.79 19.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.56 0.00 2.20 1.35 0.00 50 I12_SR1 SilentIntronRegion 0 4.23 27.71 6.13 12.27 34.78 25.67 45.35 17.93 63.45 17.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.36 0.00 1.10 3.91 2.20 51 I12_AR7 ActiveIntronRegion 0 4.23 25.67 6.59 11.24 28.43 21.32 36.91 19.01 60.83 16.20 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.96 0.00 0.00 4.17 2.94 52 I12_AR8 ActiveIntronRegion 0 2.87 25.56 7.26 10.32 26.18 18.47 31.96 19.14 58.40 19.01 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.87 0.00 0.00 4.17 2.94 53 I12_SR2 SilentIntronRegion 0 3.58 25.97 6.60 9.54 23.26 16.79 29.64 21.01 50.83 19.59 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 0.00 3.69 2.94 54 I12_AR9 ActiveIntronRegion 0 4.98 29.07 5.98 9.38 19.05 12.30 30.84 27.25 45.77 19.29 3.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.75 0.00 1.94 4.78 1.55 55 I12_SR3 SilentIntronRegion 0 1.72 29.40 5.37 9.64 23.03 21.70 50.74 28.40 46.17 19.36 2.66 0.00 0.00 0.40 0.00 0.00 0.00 0.00 15.08 0.00 2.98 5.09 0.88 56 E13_Aa NovelBoundary 0 2.89 8.02 7.81 7.19 44.74 23.51 102.50 47.44 63.57 35.75 4.69 0.00 5.84 0.00 0.00 0.00 0.00 0.00 17.88 0.00 8.34 11.45 0.00 57 ER13a ExonRegion 0 4.90 42.50 11.82 21.11 54.27 42.08 101.04 60.92 138.98 48.53 5.63 0.59 0.60 1.03 0.00 0.00 0.00 0.30 55.45 1.54 4.39 12.37 3.27 58 E13_Da KnownBoundary 0 3.04 33.22 19.81 16.41 38.54 42.76 59.93 74.67 135.85 76.61 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.32 24.19 3.26 0.00 0.00 0.00 59 ER13b ExonRegion 0 4.06 27.13 6.45 18.43 56.86 43.21 69.37 54.07 118.61 49.44 1.20 0.07 0.09 0.56 0.00 0.00 0.00 0.17 21.80 0.77 1.47 5.16 1.38