Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ADNP2 Gene 0 42.37 69.61 118.05 79.62 71.95 54.82 106.40 57.71 89.85 57.55 101.65 107.98 96.18 103.26 64.63 78.75 88.25 91.66 61.42 95.69 40.37 80.28 55.09 2 262198 Transcript 0 16.94 30.96 40.20 32.70 37.34 27.66 51.90 28.65 54.96 38.34 90.96 91.42 72.40 69.94 28.44 58.42 80.96 66.74 53.10 75.95 34.72 57.39 43.20 3 IG2_SR1 SilentIntergenicRegion 0 1.64 6.19 9.47 5.72 4.43 25.68 3.13 7.83 8.57 2.29 0.48 1.68 0.36 1.40 0.49 1.72 1.77 5.39 4.42 11.37 2.09 0.86 1.34 4 IG2_AR1 ActiveIntergenicRegion 0 1.95 5.81 2.80 3.80 4.56 27.16 0.59 8.29 8.15 2.61 0.32 0.32 0.00 0.24 0.55 1.13 0.59 4.23 0.29 6.02 1.68 0.36 0.86 5 IG2_SR2 SilentIntergenicRegion 0 4.40 7.76 6.57 9.39 5.74 34.65 0.40 10.80 6.94 3.78 0.29 0.00 0.00 0.40 0.62 0.45 2.48 5.82 1.69 9.31 1.41 2.43 1.22 6 IG2_AR2 ActiveIntergenicRegion 0 5.25 6.27 5.47 5.81 5.79 31.09 0.50 14.34 7.78 6.65 0.00 0.00 0.00 0.00 0.77 0.97 1.25 7.51 2.97 10.26 6.37 0.28 1.59 7 IG2_SR3 SilentIntergenicRegion 0 5.70 5.90 6.07 5.46 9.35 28.12 0.57 12.72 7.73 4.50 0.41 0.92 0.00 0.29 0.62 1.99 1.41 4.55 1.36 7.83 6.87 0.44 1.13 8 IG2_SR4 SilentIntergenicRegion 0 2.64 8.96 6.17 5.71 5.46 16.70 1.85 6.52 8.39 1.79 0.28 0.05 0.18 0.28 0.57 0.41 0.62 2.28 1.43 4.88 1.98 0.88 1.04 9 IG2_AR4 ActiveIntergenicRegion 0 4.27 21.21 13.77 5.69 26.34 47.78 7.98 15.30 32.48 1.54 2.61 4.29 0.00 0.63 2.48 1.39 2.18 3.44 10.37 6.60 12.33 9.33 1.37 10 IG2_AR10 ActiveIntergenicRegion 0 1.83 2.39 4.30 8.58 4.61 27.39 1.63 1.87 8.78 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 1.99 2.10 1.46 0.00 0.72 11 IG2_AR13 ActiveIntergenicRegion 0 5.05 4.24 10.28 7.25 1.92 13.66 3.52 1.50 14.65 1.76 0.00 0.19 0.00 0.30 0.44 0.27 0.59 2.84 1.85 3.14 4.34 2.52 0.26 12 ER1a ExonRegion 0 0.24 2.02 0.71 1.05 0.62 3.55 7.28 1.57 2.43 1.25 6.56 0.41 1.05 2.23 1.00 10.99 15.52 6.91 12.35 6.14 11.44 1.41 12.22 13 E1a_E2a KnownJunction 1 3.78 3.35 4.94 8.62 0.00 14.59 20.31 15.77 26.65 16.20 62.81 0.00 18.83 34.20 4.45 38.20 95.75 54.84 43.48 40.91 49.30 10.96 36.19 14 ER2a ExonRegion 0 2.03 13.36 21.70 16.31 17.71 13.62 38.00 19.03 47.33 23.73 71.49 78.00 60.54 56.41 17.58 80.37 63.15 112.88 89.72 60.37 30.36 40.10 63.54 15 E2a_E3a KnownJunction 0 0.00 18.48 18.04 22.51 19.52 30.55 39.00 16.14 41.72 44.13 92.92 94.98 68.83 42.97 13.72 42.13 39.55 36.02 47.06 66.41 32.25 47.03 23.99 16 I2_AR1 ActiveIntronRegion 0 4.93 5.23 7.80 8.44 9.28 4.15 25.57 9.63 22.15 6.48 4.74 13.01 18.05 4.17 5.65 14.54 15.53 10.95 10.60 15.83 9.57 11.20 11.29 17 I2_AR2 ActiveIntronRegion 0 16.71 3.73 8.67 14.35 7.98 3.53 32.02 9.18 23.10 5.80 6.86 8.02 18.80 3.54 5.66 10.26 13.15 8.25 5.82 18.82 2.06 13.90 8.64 18 I2_SR2 SilentIntronRegion 0 13.60 7.31 14.36 13.21 13.72 9.27 28.79 16.58 35.65 10.75 9.06 21.63 25.98 5.58 10.45 23.18 25.07 16.95 16.54 29.13 19.55 18.83 21.27 19 I2_AR3 ActiveIntronRegion 0 6.96 4.09 13.19 8.88 10.80 3.55 19.21 17.52 27.17 9.24 6.25 17.57 25.88 3.38 5.69 8.86 16.31 9.53 5.65 23.61 7.02 17.69 14.18 20 I2_SR3 SilentIntronRegion 0 6.64 3.97 12.85 8.87 9.21 5.56 20.53 7.84 20.33 8.52 9.33 13.25 10.30 2.69 6.94 8.55 6.78 8.41 5.40 19.01 4.53 14.35 9.06 21 E3_Aa NovelBoundary 1 57.27 3.29 12.57 11.95 22.24 11.02 42.44 14.17 31.77 11.71 4.74 25.06 73.21 12.54 24.23 12.13 22.91 16.91 9.13 20.26 9.39 17.70 31.50 22 ER3a ExonRegion 0 24.50 41.21 41.62 37.46 47.75 28.71 68.52 31.19 72.58 53.85 140.37 178.52 149.35 94.60 35.07 69.94 122.35 57.14 57.27 98.34 31.07 83.04 54.82 23 E3a_E4a KnownJunction 0 40.38 60.38 61.50 53.57 95.33 41.45 72.03 52.41 94.59 65.46 151.99 170.61 103.24 145.09 54.89 82.12 135.39 99.70 56.47 154.55 45.10 130.55 52.75 24 ER4a ExonRegion 0 47.68 77.90 132.93 89.38 80.46 61.16 118.13 64.44 99.43 63.75 110.56 117.45 104.97 114.06 72.34 85.20 95.04 99.69 65.36 104.91 43.51 88.63 58.89 25 IG3_AR1 ActiveIntergenicRegion 0 2.12 0.00 2.33 0.00 0.00 0.18 10.86 1.73 2.59 1.15 1.93 25.54 5.16 0.00 0.00 4.76 0.00 4.80 0.00 2.13 1.76 2.08 0.00 26 IG3_AR2 ActiveIntergenicRegion 0 3.37 1.57 4.22 6.33 2.16 4.80 11.21 1.73 8.77 3.00 2.69 18.58 6.23 2.14 5.44 2.10 2.38 2.99 3.47 7.77 0.83 2.31 2.10