Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C18orf55 Gene 0 97.84 81.30 209.80 134.44 154.07 127.57 118.47 101.51 106.60 122.10 228.52 134.90 63.31 190.85 192.61 142.45 123.37 98.35 52.77 85.35 68.85 84.97 56.20 2 169551 Transcript 0 132.39 97.02 223.99 149.54 220.96 156.42 160.73 108.18 111.41 140.12 260.05 137.33 61.46 251.66 230.32 152.76 127.68 108.31 51.33 91.43 76.02 85.25 64.39 3 ER1a ExonRegion 0 103.33 59.82 177.35 107.18 122.25 156.56 121.79 84.66 103.79 122.27 282.17 113.81 60.17 226.25 201.35 202.35 193.68 155.62 68.74 101.44 109.35 79.31 86.24 4 E1a_E2a KnownJunction 0 201.07 107.22 196.86 139.11 240.75 232.31 228.67 81.90 107.06 119.35 195.68 200.62 56.00 278.65 248.72 133.73 109.58 125.56 46.31 84.75 51.34 96.69 87.33 5 I1_AR1 ActiveIntronRegion 0 2.12 0.00 6.13 2.73 2.68 7.64 5.30 3.46 5.97 4.59 28.99 22.37 18.76 9.74 0.00 3.96 15.95 2.77 3.19 3.19 8.81 2.08 8.81 6 I1_AR2 ActiveIntronRegion 1 4.23 2.03 1.23 4.09 0.00 1.83 17.21 3.17 7.41 10.32 22.55 33.19 4.69 9.74 2.90 5.94 13.20 3.70 0.00 6.38 0.00 6.95 0.00 7 ER2a ExonRegion 0 117.18 68.82 183.69 130.34 233.13 193.89 171.63 94.98 108.83 135.08 297.18 154.97 57.55 291.62 203.09 167.10 159.23 128.23 54.00 97.03 66.57 97.89 64.65 8 E2_Da NovelBoundary 0 57.05 20.98 44.47 43.42 114.43 41.28 61.43 58.78 34.35 39.54 57.17 17.71 46.91 35.96 42.28 42.55 46.75 23.21 17.41 18.22 20.02 14.76 11.61 9 E2a_E3a KnownJunction 1 98.46 77.82 190.12 139.24 240.15 159.57 129.71 102.85 133.16 157.52 330.29 79.38 57.79 350.35 231.04 175.59 146.89 114.33 70.03 96.00 83.21 87.93 55.49 10 I2 Intron 0 12.12 6.35 3.80 13.74 19.49 8.59 26.18 4.02 1.92 4.45 29.15 38.04 10.43 25.60 19.27 15.47 12.02 5.26 0.00 9.97 2.29 5.42 6.11 11 I2_AR1 ActiveIntronRegion 0 12.35 6.48 3.85 14.01 19.85 8.77 26.73 4.11 1.94 4.53 29.76 38.78 10.65 26.14 19.61 15.76 12.28 5.37 0.00 10.17 2.32 5.53 6.24 12 E3_Aa NovelBoundary 0 41.12 29.01 46.63 15.85 43.97 23.40 83.11 37.75 33.68 19.21 47.54 24.31 26.95 38.97 4.45 31.44 27.86 18.61 11.39 15.92 10.87 5.57 12.72 13 ER3a ExonRegion 0 111.20 76.72 229.08 150.07 254.52 164.01 153.67 93.44 99.46 141.41 317.55 132.49 75.09 295.90 226.24 161.86 141.40 116.84 51.06 104.97 85.65 83.98 65.21 14 E3_Da NovelBoundary 0 3.11 0.00 16.50 9.09 3.57 16.69 12.90 6.90 6.92 9.91 16.53 18.46 41.72 14.07 0.00 22.81 8.13 1.66 8.28 6.52 2.59 2.88 3.33 15 E3a_E4a KnownJunction 1 181.22 109.13 254.81 161.48 245.93 112.49 138.41 97.18 97.60 140.81 261.01 177.96 36.36 240.80 249.95 138.60 112.67 129.91 36.24 80.09 82.66 74.03 77.85 16 ER4a ExonRegion 0 118.84 86.67 231.05 139.27 194.53 129.80 156.21 100.16 109.56 143.19 246.73 152.70 63.00 242.17 215.91 134.19 127.98 106.00 38.96 83.64 72.13 77.96 54.65 17 E4a_E5a KnownJunction 0 149.51 156.62 254.10 166.25 285.48 191.48 233.75 126.71 105.53 161.66 242.54 69.62 81.16 237.80 259.10 181.32 139.22 83.90 70.78 91.40 106.38 103.61 73.67 18 ER5a ExonRegion 0 159.96 121.90 280.48 170.57 252.58 180.34 179.60 137.64 118.15 158.00 275.55 123.39 54.64 246.41 259.03 167.39 118.46 119.84 50.09 109.31 81.54 89.06 66.05 19 E5_Da NovelBoundary 0 33.71 53.94 54.94 22.18 31.07 2.50 14.97 13.97 12.36 20.50 35.96 19.36 0.00 23.90 26.58 46.83 12.06 23.46 0.00 17.64 3.15 6.18 19.80 20 E5a_E6a KnownJunction 0 141.51 105.18 239.26 188.49 222.84 125.16 166.94 156.04 134.40 153.89 271.07 151.25 67.53 248.46 277.03 146.29 110.33 82.41 39.53 96.83 75.18 57.62 55.57 21 I5 Intron 1 9.81 17.81 14.11 5.23 42.73 21.73 20.46 9.29 8.53 3.52 18.92 31.62 1.99 17.23 17.76 16.84 5.10 7.58 9.85 7.67 4.54 7.51 4.54 22 I5_AR1 ActiveIntronRegion 1 10.02 18.18 14.40 5.34 43.61 22.18 20.88 9.48 8.70 3.59 19.31 32.23 2.03 17.58 18.10 17.19 5.21 7.73 10.05 7.83 4.63 7.67 4.63 23 E6_Aa NovelBoundary 0 25.19 42.03 73.92 18.15 57.89 31.35 37.58 17.00 12.53 28.61 33.43 37.21 27.27 24.07 39.31 31.44 9.54 13.43 8.85 19.69 3.15 22.78 12.21 24 ER6a ExonRegion 0 74.06 97.32 227.05 152.96 138.39 74.99 87.70 114.41 107.95 108.15 140.76 154.50 66.76 109.88 162.01 71.97 45.05 28.76 38.85 60.28 22.27 89.66 21.55 25 IG22_SR1 SilentIntergenicRegion 0 8.71 16.27 15.25 16.64 10.06 11.72 10.35 8.44 11.81 6.73 1.91 1.17 0.00 1.78 1.54 4.89 0.00 11.93 3.67 10.05 1.09 0.69 1.45 26 IG22_SR2 SilentIntergenicRegion 0 3.99 9.94 15.09 14.86 13.08 7.07 10.17 4.78 9.50 6.89 0.62 0.71 1.82 1.21 1.21 0.53 1.65 6.72 3.07 7.59 0.16 0.67 0.84