Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FECH Gene 0 68.62 66.87 227.64 89.32 96.84 179.10 177.47 68.86 126.44 82.43 42.50 101.33 81.63 107.00 65.43 68.17 58.06 52.59 33.99 73.38 59.21 51.55 48.87 2 262093 Transcript 0 19.57 23.29 107.84 39.39 38.30 77.72 67.25 39.35 81.84 53.63 34.87 50.92 47.36 54.36 28.31 41.01 53.82 41.00 26.47 35.95 56.40 30.33 42.45 3 382873 Transcript 0 0.00 2.00 14.70 7.99 0.00 15.05 7.26 2.57 16.49 3.16 6.53 9.94 7.30 7.68 5.34 11.51 16.32 8.92 7.53 8.21 8.18 9.95 6.58 4 IG41_AR4 ActiveIntergenicRegion 0 5.57 4.55 23.49 7.41 22.53 8.55 17.90 12.21 8.46 7.91 5.15 13.20 18.96 3.41 4.79 1.06 4.71 1.33 3.41 12.04 0.79 9.30 1.93 5 IG41_SR4 SilentIntergenicRegion 0 7.58 9.41 19.08 8.08 7.60 0.60 10.33 5.83 5.68 7.52 2.96 15.88 11.86 2.81 4.63 0.00 3.34 2.15 6.46 10.88 3.72 6.68 6.11 6 IG41_SR3 SilentIntergenicRegion 0 2.52 4.82 11.43 16.67 7.55 3.19 5.92 5.77 9.33 6.15 1.08 2.59 3.32 1.40 2.89 1.52 1.59 3.68 4.01 7.30 1.15 2.31 2.25 7 ER1a ExonRegion 0 11.95 9.45 10.25 2.97 9.22 87.65 44.38 6.97 10.23 6.35 9.03 0.00 4.41 27.68 17.65 24.15 15.26 22.34 13.06 10.96 15.85 5.78 31.02 8 E1_Ab KnownBoundary 0 47.05 44.14 37.67 22.27 30.90 397.50 191.80 23.29 46.96 24.10 24.95 0.00 6.17 50.56 54.52 60.07 57.50 71.80 35.95 47.43 47.32 17.64 60.18 9 ER1b ExonRegion 0 15.77 14.30 41.30 11.71 16.13 201.20 91.96 14.26 33.30 20.80 14.25 8.14 3.71 35.06 21.88 23.60 47.70 33.33 18.38 23.87 40.68 15.31 26.58 10 E1a_E2a KnownJunction 1 7.11 2.89 51.18 14.72 3.23 33.62 43.37 14.17 49.54 36.53 14.95 12.15 13.15 33.14 41.54 7.35 44.88 15.09 3.48 25.06 39.29 18.74 11.27 11 ER2a ExonRegion 0 7.68 8.52 122.95 42.55 12.35 36.49 37.34 51.61 112.82 75.75 46.54 56.45 69.72 101.23 67.78 90.10 80.26 62.17 40.48 90.53 83.90 39.70 58.94 12 E2a_E3a KnownJunction 0 7.56 23.88 209.81 67.86 33.45 84.10 69.56 77.47 180.84 122.60 88.07 108.34 104.70 120.49 47.47 88.69 137.35 89.95 54.31 66.03 142.89 65.89 82.29 13 E2b_E3a KnownJunction 0 0.00 2.76 14.49 8.02 0.00 18.28 5.92 2.55 17.33 2.82 7.37 12.90 6.01 4.71 5.19 11.96 14.31 9.33 9.04 8.50 8.65 10.41 6.32 14 ER2b ExonRegion 0 0.00 1.24 14.91 7.95 0.00 11.82 8.61 2.59 15.64 3.50 5.69 6.98 8.60 10.65 5.48 11.06 18.34 8.52 6.02 7.92 7.71 9.49 6.85 15 ER3a ExonRegion 0 7.04 32.35 226.34 70.47 50.35 269.63 166.05 89.65 181.54 115.87 78.51 151.57 195.42 171.56 74.95 130.18 109.51 110.54 41.17 122.13 134.32 70.18 95.02 16 E3_Da NovelBoundary 0 18.08 21.31 48.02 26.50 22.67 57.24 67.52 45.67 55.15 22.62 2.68 18.16 25.65 7.42 8.90 8.54 14.21 6.67 0.00 11.95 2.59 10.84 11.87 17 E3a_E4a KnownJunction 0 16.97 38.48 271.28 57.07 48.56 574.50 230.49 73.81 180.55 157.71 115.45 120.94 172.07 226.68 147.23 133.90 144.37 81.66 61.18 148.93 173.78 82.30 103.72 18 I3 Intron 0 16.29 21.01 21.18 23.14 17.21 31.11 42.71 27.00 45.58 20.00 2.74 17.70 17.00 7.91 4.36 4.96 4.35 4.52 8.55 17.89 4.13 6.01 5.65 19 I3_AR1 ActiveIntronRegion 0 23.04 14.17 29.09 34.96 16.09 34.00 33.29 39.24 64.10 30.63 2.53 14.38 20.05 9.96 4.90 7.84 3.51 4.60 11.49 15.75 5.11 7.25 5.38 20 I3_SR1 SilentIntronRegion 0 15.61 26.16 20.84 22.19 16.60 30.58 47.66 25.31 45.43 20.10 3.13 18.71 18.10 7.74 4.17 3.47 4.96 4.11 7.72 19.98 4.02 5.85 4.51 21 I3_AR2 ActiveIntronRegion 0 9.46 13.09 11.59 10.26 21.05 29.26 39.28 16.12 20.92 5.12 1.73 19.02 9.19 5.72 4.31 6.13 3.45 5.83 7.42 13.87 3.16 4.93 9.98 22 E4_Aa NovelBoundary 0 53.49 84.00 87.87 40.89 66.13 83.19 140.35 51.18 90.77 52.46 6.79 19.96 18.51 21.78 6.30 20.68 16.27 23.42 41.22 47.62 6.18 5.51 15.88 23 ER4a ExonRegion 0 42.43 44.62 265.23 68.84 52.62 215.10 162.11 84.93 210.19 128.04 81.97 187.01 181.87 220.63 94.90 153.23 126.34 109.38 58.62 125.22 136.96 89.61 98.11 24 E4a_E5a KnownJunction 1 26.89 44.47 295.70 77.28 32.94 175.52 174.44 58.12 189.32 102.42 75.23 138.80 132.62 208.84 43.64 159.10 139.41 65.91 42.73 150.46 114.54 68.34 88.27 25 I4_AR2 ActiveIntronRegion 0 1.66 11.22 12.93 19.21 8.54 21.48 17.70 6.74 10.73 7.46 0.75 3.74 3.51 1.03 0.56 4.15 1.30 4.25 1.06 11.28 4.06 1.51 3.15 26 E5_Aa NovelBoundary 0 3.33 5.39 15.46 35.83 3.90 26.97 20.14 6.61 11.14 10.58 2.68 18.46 6.17 2.47 0.00 0.00 0.00 2.57 4.71 17.90 0.00 0.00 0.00 27 ER5a ExonRegion 0 24.50 48.56 231.62 86.41 55.26 203.21 187.26 75.76 176.74 95.18 74.92 144.12 129.13 191.47 79.64 123.55 130.06 103.54 59.01 115.21 120.65 71.35 73.96 28 E5a_E6a KnownJunction 0 13.71 46.18 218.41 106.15 70.80 168.65 206.77 75.86 161.69 92.27 94.39 101.73 138.95 182.00 89.00 110.40 136.23 96.59 57.13 97.41 119.60 118.30 62.83 29 ER6a ExonRegion 0 40.99 50.38 238.19 105.21 86.80 242.08 204.76 100.70 167.28 93.79 86.62 148.46 145.00 221.76 85.63 161.22 136.20 143.62 76.48 113.34 130.53 69.11 92.19 30 E6_Da NovelBoundary 0 6.89 0.00 22.03 6.99 0.00 0.00 9.72 4.85 4.80 2.69 2.11 0.00 0.00 2.47 0.00 3.59 0.00 3.15 17.41 0.00 0.00 0.00 0.00 31 E6a_E7a KnownJunction 0 45.49 40.58 242.30 109.04 95.33 180.46 170.60 81.70 152.78 93.69 99.60 105.03 105.51 162.40 82.33 120.65 91.91 131.57 52.33 116.58 130.23 79.54 80.33 32 E6a_E8a NovelJunction 0 0.00 5.46 11.95 5.59 8.66 4.32 10.16 0.00 0.00 2.85 0.00 19.66 27.92 9.54 4.70 7.86 3.83 0.00 0.00 9.08 11.86 2.76 0.00 33 ER7a ExonRegion 0 64.52 54.39 243.48 105.41 94.27 240.76 208.60 86.02 162.90 98.96 75.42 130.89 102.28 182.66 82.58 130.77 109.40 81.06 47.68 112.31 119.42 68.99 81.10 34 E7a_E8a KnownJunction 1 29.49 56.37 247.68 78.81 75.13 233.39 191.67 73.77 135.88 91.22 39.38 88.53 106.00 177.41 43.14 80.06 91.82 54.55 15.91 86.67 119.85 31.84 54.29 35 ER8a ExonRegion 0 40.61 61.82 241.76 97.00 68.01 222.33 183.83 71.35 149.88 115.15 61.78 132.57 91.33 193.93 90.29 121.61 89.92 79.86 67.69 95.69 122.55 69.62 80.19 36 E8a_E9a KnownJunction 0 29.78 75.25 293.87 106.35 89.39 284.95 191.84 62.60 156.48 94.72 56.28 63.17 75.97 150.45 69.84 115.01 108.65 96.84 29.93 142.98 131.96 74.83 66.58 37 ER9a ExonRegion 0 56.17 56.63 305.48 101.48 118.79 331.82 235.58 77.43 172.82 123.05 72.62 124.74 91.53 193.30 106.50 148.55 103.89 135.15 60.43 115.95 110.47 72.18 100.08 38 E9a_E10a KnownJunction 0 97.65 62.55 395.40 110.48 127.25 295.74 248.24 95.42 221.93 136.97 95.50 213.82 124.67 269.94 153.16 214.05 129.22 185.34 114.26 122.85 81.61 109.18 121.30 39 E10_Aa NovelBoundary 0 14.00 26.25 37.61 14.28 38.71 20.50 55.34 16.68 7.90 9.00 2.21 0.00 0.00 0.00 0.00 7.26 0.00 4.48 3.95 3.26 0.00 2.82 3.59 40 ER10a ExonRegion 0 73.69 49.38 375.33 111.55 99.14 295.42 244.07 92.24 204.23 146.82 137.33 103.33 78.40 202.26 107.97 148.41 159.49 141.94 67.00 139.64 149.48 88.83 113.89 41 E10_Da NovelBoundary 0 15.26 11.97 33.38 19.64 12.73 11.24 32.77 25.55 16.87 7.28 2.42 6.30 0.00 2.24 4.57 7.18 0.00 0.00 0.00 6.46 0.00 5.76 8.28 42 E10a_E11a KnownJunction 1 65.72 71.04 341.71 100.85 112.65 296.08 232.87 63.91 164.55 139.95 94.02 96.18 100.97 205.19 81.71 50.93 161.10 97.62 45.93 105.53 178.91 71.70 93.64 43 I10 Intron 0 15.45 12.63 22.28 10.84 14.00 12.59 30.01 9.54 12.03 10.80 0.63 7.25 7.97 2.50 3.05 3.24 3.24 4.00 0.00 6.03 0.96 1.59 4.16 44 I10_AR1 ActiveIntronRegion 0 22.66 11.63 21.59 11.05 17.92 13.23 37.94 11.97 12.94 14.54 0.31 6.45 10.53 2.27 3.09 3.27 5.20 0.47 0.00 7.04 0.00 2.55 2.64 45 ER11a ExonRegion 0 130.34 122.31 363.80 145.54 156.41 257.65 280.15 102.84 176.17 119.80 53.41 145.25 106.47 142.08 97.93 76.78 63.90 52.39 39.13 90.43 60.26 73.33 53.91 46 E11_Da KnownBoundary 1 25.86 84.92 178.32 90.23 126.49 106.25 164.90 72.00 72.31 66.30 10.16 76.07 85.22 16.78 45.37 24.78 15.61 6.30 12.71 57.85 5.99 70.36 25.10 47 ER11b ExonRegion 0 39.19 36.53 103.48 47.35 72.22 61.42 87.82 33.62 54.44 31.95 7.52 44.42 32.97 14.92 19.82 10.18 8.84 10.69 12.05 30.87 10.47 19.31 14.04 48 IG40_SR4 SilentIntergenicRegion 0 11.81 18.28 76.63 32.86 24.21 39.17 38.27 19.83 61.85 17.72 0.62 3.51 2.55 2.19 2.42 0.97 1.42 8.26 5.64 12.59 6.06 5.61 5.90 49 IG40_AR2 ActiveIntergenicRegion 0 15.72 25.91 100.03 39.20 36.67 50.33 47.77 23.04 48.26 16.02 1.13 2.85 2.85 1.39 1.20 1.13 0.64 6.78 3.74 9.52 5.13 8.51 5.34