Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C18orf19 Gene 0 24.43 50.12 56.22 23.77 36.12 43.08 49.93 27.81 19.89 42.99 95.65 86.78 45.29 61.71 48.37 45.17 38.94 21.49 22.63 23.76 19.50 32.42 25.52 2 402563 Transcript 1 4.89 0.00 8.00 1.65 0.00 0.00 8.06 7.00 2.94 12.68 62.86 5.78 0.00 64.46 25.66 21.36 24.69 14.20 15.01 12.88 11.75 18.69 17.29 3 322247 Transcript 0 1.90 2.61 0.83 0.40 2.47 2.20 4.85 0.65 0.41 0.17 0.80 2.13 2.78 3.16 3.81 3.30 0.33 0.18 0.96 2.54 0.88 1.05 0.00 4 457610 Transcript 0 1.06 0.00 2.76 0.34 0.67 0.69 2.65 1.73 1.08 3.15 18.85 2.16 0.00 14.62 5.80 9.29 9.49 4.85 4.78 2.93 3.03 3.91 5.51 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 3.49 0.00 0.00 0.59 3.63 0.00 0.00 6.89 0.26 0.09 1.70 0.00 0.00 0.00 0.33 0.63 0.00 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 8.70 0.00 0.00 1.26 7.90 0.00 0.00 19.60 0.00 0.00 4.39 0.00 0.00 0.00 0.00 2.39 0.00 7 ER1b ExonRegion 1 5.28 6.73 9.03 0.67 4.80 21.97 11.85 4.46 2.06 11.12 52.42 7.82 3.41 31.60 23.45 16.76 16.76 8.01 20.26 7.76 19.69 8.01 10.49 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E3b KnownJunction 1 9.78 0.00 16.00 3.30 0.00 0.00 12.63 14.01 5.87 24.77 122.08 11.55 0.00 122.02 51.05 42.64 47.69 28.40 30.02 25.76 23.17 36.74 34.57 10 E2_Aa NovelBoundary 0 512.76 355.73 174.57 213.16 334.13 214.14 392.39 181.18 158.42 162.62 88.65 56.87 85.71 47.44 64.03 289.75 203.55 166.73 193.79 236.24 89.89 115.55 267.10 11 ER2a ExonRegion 0 7.59 8.91 2.11 1.62 3.20 5.11 16.76 0.01 0.69 0.68 3.19 8.52 11.10 11.03 15.25 9.01 1.32 0.74 3.83 10.17 3.51 4.22 0.00 12 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 1.06 0.00 2.76 0.34 0.67 0.69 2.65 1.73 1.08 3.15 18.85 2.16 0.00 14.62 5.80 9.29 9.49 4.85 4.78 2.93 3.03 3.91 5.51 14 ER3b ExonRegion 0 15.73 30.81 46.82 16.33 32.34 56.73 52.15 27.76 30.35 50.67 267.75 106.09 63.00 154.81 72.14 110.97 103.15 57.84 58.14 38.08 48.03 61.15 63.37 15 E3a_E4a KnownJunction 0 17.56 31.18 38.20 11.35 19.52 70.19 59.88 29.00 26.74 48.24 179.84 171.21 61.52 170.35 101.37 154.57 99.67 46.26 70.87 32.21 46.09 86.46 108.92 16 E3a_E5a NovelJunction 0 7.56 12.10 6.80 5.16 8.23 0.00 19.78 9.90 4.69 2.34 57.54 6.15 0.00 9.18 8.90 12.39 12.72 4.23 9.41 12.21 6.05 6.18 4.01 17 ER4a ExonRegion 0 13.51 28.67 43.06 11.82 27.21 53.93 51.92 29.41 20.18 47.37 242.60 153.04 59.50 141.41 74.84 92.24 115.80 45.52 43.32 43.67 47.30 55.66 47.88 18 E4a_E5a KnownJunction 0 12.89 48.08 28.83 8.06 36.67 30.55 66.51 28.18 11.17 30.35 149.09 85.98 48.05 135.91 57.61 55.46 59.65 23.26 25.60 24.67 63.32 36.62 23.22 19 I4_SR2 SilentIntronRegion 1 5.39 6.89 10.19 7.03 7.22 7.64 14.38 4.52 5.27 7.84 23.13 15.57 12.52 9.78 4.58 7.67 6.24 5.68 3.75 5.36 2.16 5.49 6.16 20 I4_AR2 ActiveIntronRegion 0 6.77 5.27 12.58 2.80 6.40 3.77 11.58 3.52 0.79 4.42 27.41 21.57 15.49 6.06 6.22 9.13 12.56 2.24 5.06 2.43 0.00 4.99 1.84 21 E5_Aa NovelBoundary 0 13.34 15.00 14.01 11.42 14.60 16.92 7.86 4.76 0.00 6.93 58.49 13.95 0.00 16.13 4.45 3.16 8.04 9.24 13.55 5.43 8.77 0.00 7.94 22 ER5a ExonRegion 0 28.36 58.92 64.11 28.02 40.85 44.16 54.04 30.79 20.55 46.07 72.86 91.26 46.96 49.94 47.56 37.73 30.27 17.28 17.83 22.90 15.17 30.54 21.48 23 ER5b ExonRegion 0 0.00 1.53 1.23 0.00 6.69 3.67 2.65 2.59 0.93 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00