Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PTPN2	Gene	0	155.13	73.24	120.14	39.10	77.32	79.32	62.24	34.41	34.80	43.60	213.86	243.57	312.64	149.55	147.75	126.56	87.46	21.92	32.10	42.80	27.27	82.35	45.37
2	327283	Transcript	0	80.51	32.46	97.83	30.40	62.65	35.26	32.70	31.13	18.61	29.94	135.70	136.49	131.92	131.91	203.39	114.10	51.61	8.36	20.99	15.06	19.64	109.04	38.47
3	399900	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	353319	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00
5	309660	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	341361	Transcript	1	8.98	5.10	6.67	2.31	6.72	10.14	8.98	2.16	4.99	2.64	10.55	36.84	58.05	10.04	10.12	11.42	5.39	3.93	1.02	16.10	0.04	5.36	6.56
7	IG33_AR1	ActiveIntergenicRegion	0	10.71	6.49	9.83	2.92	8.39	9.93	5.26	5.75	2.85	6.52	7.82	14.72	5.09	16.19	9.24	11.22	3.23	4.30	5.40	5.19	1.98	1.17	5.03
8	IG33_SR2	SilentIntergenicRegion	0	3.48	3.49	9.54	4.09	8.03	9.56	5.01	10.62	3.35	1.80	9.39	5.57	9.38	29.35	13.06	15.50	3.30	3.70	4.32	2.58	0.00	2.08	7.13
9	IG33_SR1	SilentIntergenicRegion	0	2.77	1.44	3.20	0.26	1.23	3.93	0.97	2.27	2.10	2.37	5.31	5.53	0.32	9.50	3.99	5.50	1.63	2.89	1.11	2.51	0.55	0.84	2.79
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.10	0.00	0.00
11	ER1b	ExonRegion	0	0.61	1.49	0.54	0.00	0.00	5.11	0.80	1.41	1.73	0.59	2.58	0.00	0.00	1.47	2.43	2.43	0.00	0.00	0.00	0.55	2.27	2.22	0.00
12	E1_Ac	KnownBoundary	0	6.08	6.45	2.72	0.00	0.00	19.93	6.01	0.00	1.79	1.67	9.11	0.00	0.00	7.06	14.96	15.12	0.00	1.53	4.33	5.18	5.68	5.57	4.35
13	ER1c	ExonRegion	0	16.00	4.54	4.47	1.05	20.35	69.47	18.01	0.36	2.99	7.01	28.54	0.00	0.00	25.04	37.85	44.86	21.95	7.95	7.26	7.52	15.17	7.80	10.31
14	E1_Ad	KnownBoundary	0	47.64	8.75	4.02	1.83	75.72	160.53	43.59	0.00	5.93	10.45	54.49	5.70	0.00	69.10	90.36	90.32	53.39	24.91	17.32	6.46	34.47	16.23	27.91
15	ER1d	ExonRegion	1	58.62	22.08	27.09	7.79	51.69	85.39	28.83	12.41	10.79	25.30	130.46	24.81	16.82	69.23	76.35	114.31	70.52	21.40	24.45	23.88	35.38	28.76	46.89
16	E1a_E2a	KnownJunction	1	14.82	7.43	42.81	17.98	7.56	7.33	21.37	10.80	19.91	32.72	134.93	82.98	25.81	71.99	57.61	38.88	97.62	14.55	13.65	14.38	47.14	45.62	7.68
17	E1a_E4a	NovelJunction	0	22.37	0.00	6.12	7.09	6.54	2.90	8.04	2.26	2.69	4.24	0.00	0.00	0.00	0.00	0.00	4.27	0.00	5.47	0.00	3.26	3.03	0.00	0.00
18	ER2a	ExonRegion	0	36.79	21.68	84.58	19.68	23.05	23.42	18.81	27.67	30.46	41.65	368.29	139.97	201.21	159.40	167.99	162.19	160.15	22.38	41.48	42.30	60.03	73.52	59.70
19	E2a_E4a	KnownJunction	1	85.72	61.44	158.72	41.25	29.37	44.35	42.13	42.76	60.36	52.97	366.72	286.74	432.60	258.11	316.58	468.34	109.12	68.44	70.21	77.08	52.94	112.91	118.31
20	ER3a	ExonRegion	0	3.09	1.14	3.70	0.00	0.00	2.06	4.68	0.00	1.37	0.96	7.03	14.65	10.72	8.12	4.37	4.08	11.10	3.45	1.96	14.17	0.12	1.05	7.71
21	E3a_E4a	KnownJunction	0	3.78	0.00	5.06	0.00	0.00	0.00	2.08	0.00	5.01	0.00	2.47	12.60	34.74	7.53	10.75	8.63	0.00	2.57	0.00	11.82	0.00	2.76	7.85
22	ER4a	ExonRegion	0	96.79	50.84	129.94	37.04	119.03	155.73	64.80	40.22	43.91	48.85	465.71	261.18	341.95	253.60	221.30	270.32	199.16	62.90	51.47	91.11	74.32	111.73	93.80
23	E4a_E5a	KnownJunction	0	114.98	46.37	157.56	43.55	105.09	105.56	82.41	64.65	65.19	59.93	395.84	203.02	302.09	140.80	120.40	162.69	148.85	65.41	52.43	62.26	69.50	125.53	72.47
24	ER5a	ExonRegion	0	90.45	54.87	158.23	46.38	56.97	76.89	50.86	34.74	47.36	51.62	377.66	269.91	403.82	254.45	204.76	213.36	148.51	47.93	46.91	75.18	66.51	113.04	56.27
25	E5a_E6a	KnownJunction	0	168.25	101.50	190.41	56.97	80.81	58.89	79.49	50.07	55.99	68.95	485.23	367.62	691.68	422.39	315.72	322.39	260.59	52.23	76.52	159.41	108.42	179.60	76.31
26	E5a_E7a	NovelJunction	0	7.41	3.35	6.92	4.33	0.00	0.00	0.00	2.55	5.09	0.00	13.11	0.00	0.00	19.66	0.00	0.00	0.00	0.00	8.47	3.00	0.00	8.45	0.00
27	ER6a	ExonRegion	0	155.09	90.13	175.23	43.85	71.12	72.47	61.22	44.95	38.25	61.82	360.74	346.26	400.11	246.23	202.66	210.67	152.53	43.32	48.11	56.20	45.18	138.70	73.35
28	E6_Da	NovelBoundary	0	19.48	9.54	12.83	5.73	4.24	11.36	16.91	4.60	5.87	7.84	21.06	68.72	70.29	12.24	10.14	24.87	17.86	6.72	3.58	21.22	2.47	18.49	7.68
29	E6a_E7a	KnownJunction	0	295.76	129.98	191.86	74.68	121.99	93.53	118.31	57.30	54.92	89.64	460.70	302.35	297.71	289.60	264.54	239.00	171.95	55.63	54.03	76.57	42.50	167.47	89.97
30	I6_SR2	SilentIntronRegion	0	12.85	3.90	6.29	3.79	9.54	10.84	15.76	3.85	7.00	4.01	20.34	20.22	27.16	13.71	11.00	20.39	15.41	3.77	4.21	12.93	8.01	8.14	7.84
31	I6_AR2	ActiveIntronRegion	0	11.83	3.53	8.86	3.97	6.38	12.35	11.89	7.15	8.32	3.58	19.96	21.39	33.42	19.15	9.44	33.95	17.63	10.48	6.22	9.50	13.11	7.79	11.39
32	I6_AR5	ActiveIntronRegion	0	17.25	4.17	9.88	5.74	12.66	15.46	23.26	7.41	5.19	2.89	15.65	25.48	38.69	10.69	9.69	15.96	4.83	3.06	1.08	10.12	3.39	7.15	8.94
33	E7_Aa	NovelBoundary	0	70.61	22.36	23.59	21.54	35.48	18.68	19.17	7.31	3.59	5.53	22.01	29.71	33.44	12.54	4.45	33.75	8.70	9.20	0.00	14.70	5.81	15.92	4.10
34	ER7a	ExonRegion	0	264.72	159.87	234.73	74.83	149.74	134.11	102.15	59.10	60.65	81.41	441.76	435.69	506.48	336.28	265.13	241.04	193.04	53.80	55.35	59.82	59.55	152.64	98.87
35	E7a_E8a	KnownJunction	0	342.43	157.80	339.43	129.55	172.07	212.43	118.40	91.55	57.70	108.79	276.12	408.13	443.15	350.46	303.60	233.44	129.69	42.99	57.51	85.59	44.42	154.86	86.30
36	ER8a	ExonRegion	0	534.25	183.89	300.36	101.98	205.26	216.23	167.35	76.11	62.42	93.36	343.70	435.38	871.30	309.02	322.13	214.36	172.06	22.00	46.03	77.25	26.86	179.52	62.42
37	E8a_E9a	KnownJunction	0	979.21	318.96	310.72	127.66	365.28	268.65	189.37	77.26	73.47	123.94	432.00	490.06	903.19	171.94	270.97	225.84	181.11	24.42	43.01	83.41	14.33	156.88	42.00
38	ER9a	ExonRegion	0	513.56	210.82	326.43	91.40	206.11	159.22	124.30	70.64	89.86	102.63	542.45	710.58	1019.67	334.51	386.27	248.32	214.03	35.31	69.12	80.22	52.65	197.88	89.84
39	E9a_E11a	KnownJunction	0	364.43	208.12	383.46	119.07	245.25	149.06	164.86	93.11	98.73	121.28	583.41	733.74	678.69	345.87	482.23	351.87	190.65	55.42	138.45	84.05	78.64	225.83	117.89
40	E9a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00
41	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER11a	ExonRegion	0	277.70	192.13	368.64	107.95	234.57	196.88	157.72	91.57	94.57	116.48	618.47	738.98	775.28	385.20	496.74	393.25	237.96	57.44	102.12	108.66	87.50	239.36	135.78
43	E11_Da	KnownBoundary	0	82.16	130.24	96.36	26.24	79.63	68.48	113.76	16.27	28.12	32.88	170.67	254.18	294.14	158.81	130.29	139.54	112.30	10.99	33.04	58.68	23.04	48.56	76.23
44	E11a_E12a	KnownJunction	0	226.71	94.52	293.48	91.20	187.95	105.79	98.09	93.40	55.82	89.83	407.10	409.48	395.75	395.73	610.18	342.30	154.84	25.08	62.97	45.19	57.82	327.11	115.41
45	ER11b	ExonRegion	0	43.13	49.95	65.10	26.79	45.93	52.87	52.71	27.41	26.55	29.55	86.93	178.01	201.43	80.11	64.72	57.44	31.30	9.72	18.74	35.66	8.42	41.25	21.02
46	E11_Db	KnownBoundary	1	30.08	27.30	31.05	26.74	40.75	56.90	37.41	19.80	25.67	21.33	30.64	197.01	228.07	23.60	22.25	35.80	7.85	4.06	4.14	21.22	0.00	26.27	11.78
47	ER11c	ExonRegion	1	20.07	14.16	11.24	6.92	20.17	28.35	20.16	6.48	8.60	6.95	22.15	83.26	128.71	14.46	15.23	21.55	5.08	5.76	1.10	22.30	0.00	12.26	4.12
48	E11_Dc	NovelBoundary	1	20.52	24.01	39.35	29.53	21.31	83.93	78.87	23.91	9.90	18.75	37.64	117.34	136.84	36.97	6.30	12.22	4.49	1.70	4.42	21.28	2.66	18.92	15.54
49	I11	Intron	0	21.31	20.67	18.39	20.26	20.20	33.17	25.68	7.20	10.83	7.65	36.22	75.37	92.48	36.76	26.08	22.18	10.16	7.04	10.99	22.22	4.73	16.12	7.94
50	I11_AR1	ActiveIntronRegion	0	18.60	18.82	23.50	20.71	26.02	38.56	32.00	6.87	13.03	7.78	37.00	94.64	126.17	44.08	33.07	18.66	11.91	7.94	11.50	22.04	5.19	18.62	10.13
51	I11_SR1	SilentIntronRegion	0	25.51	23.57	11.01	19.77	11.79	25.51	16.56	7.76	7.68	7.53	35.40	47.58	43.55	26.28	15.98	27.57	7.64	5.76	10.34	22.69	4.09	12.56	4.77
52	I11	Intron	0	109.14	120.75	60.59	42.93	50.12	78.66	40.63	31.77	34.13	33.20	90.46	101.64	114.83	65.29	35.61	78.34	27.82	24.12	23.01	42.02	17.45	40.20	18.46
53	I11_SR1	SilentIntronRegion	1	44.35	37.77	35.80	24.27	45.50	55.14	33.57	18.40	32.11	25.46	68.52	98.98	113.00	65.31	22.98	59.01	17.45	21.17	26.88	32.91	15.19	34.16	14.05
54	I11_AR1	ActiveIntronRegion	0	122.19	137.45	65.59	46.70	51.08	83.42	42.07	34.47	34.56	34.77	94.92	102.23	115.27	65.32	38.17	82.26	29.92	24.72	22.25	43.87	17.91	41.43	19.36
55	E12_Aa	NovelBoundary	1	221.74	103.99	157.56	120.83	100.25	152.36	57.90	51.84	49.88	64.76	130.19	138.35	81.16	50.39	104.58	94.59	21.32	33.91	36.33	50.17	8.65	53.89	19.72
56	ER12a	ExonRegion	0	274.61	37.82	74.74	27.57	45.16	42.49	36.75	20.65	17.60	23.58	120.03	115.53	120.17	73.22	116.18	90.82	35.95	12.64	24.91	10.25	14.43	70.75	35.82
57	ER12b	ExonRegion	0	14.82	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00