Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MPPE1	Gene	0	32.64	25.83	49.38	20.44	24.42	76.81	18.77	19.42	32.09	25.83	33.48	28.22	20.30	56.56	53.66	47.44	36.79	27.76	12.37	18.20	27.70	32.37	34.31
2	309976	Transcript	0	0.00	0.00	2.92	0.00	0.00	0.67	0.00	1.49	3.36	0.64	3.55	0.00	0.00	1.72	1.50	0.00	0.00	0.97	2.34	0.78	0.00	1.53	0.00
3	317251	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	399978	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	317235	Transcript	0	0.49	1.41	0.00	0.00	0.00	0.27	0.00	0.00	0.11	0.00	0.00	0.98	0.00	0.00	7.48	0.00	0.00	0.00	0.00	0.00	0.00	1.56	5.94
6	344987	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	496196	Transcript	0	71.25	11.95	64.25	6.61	51.40	49.44	10.36	22.54	16.85	17.39	24.90	27.70	21.31	44.87	86.94	38.65	46.18	28.38	14.83	15.70	14.44	29.68	24.04
8	ER1a	ExonRegion	0	0.00	0.00	2.92	0.00	0.00	0.67	0.00	1.49	3.36	0.64	3.55	0.00	0.00	1.72	1.50	0.00	0.00	0.97	2.34	0.78	0.00	1.53	0.00
9	E1_Ab	KnownBoundary	0	0.00	0.00	6.15	1.37	0.00	0.00	0.00	5.09	6.68	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	4.19	0.00	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	0.09	0.87	1.85	0.33	0.61	1.06	0.90	0.18	2.26	0.28	2.47	0.00	0.00	1.09	1.69	0.56	0.00	0.91	0.00	0.02	0.65	0.36	0.22
11	E1_Ac	KnownBoundary	0	0.00	3.16	1.83	0.00	0.00	8.01	4.50	0.00	6.42	0.00	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.99	3.12	0.00
12	E1_Ad	KnownBoundary	0	10.52	14.73	3.99	0.00	7.98	41.79	3.67	0.00	3.88	2.39	12.37	0.00	0.00	20.90	8.90	22.73	0.00	0.00	4.05	5.69	45.72	35.64	34.49
13	ER1c	ExonRegion	1	10.26	10.17	4.81	0.10	2.68	40.48	5.09	0.00	7.98	1.41	13.68	0.00	0.00	15.62	7.36	17.83	0.51	0.28	0.00	4.26	36.62	29.01	26.20
14	ER1d	ExonRegion	1	87.54	83.46	32.83	28.89	72.06	227.42	58.44	17.94	48.56	34.40	56.59	4.44	4.12	43.77	22.76	93.21	54.29	40.22	41.03	28.58	40.03	48.37	107.52
15	E1a_E2a	KnownJunction	0	24.37	24.60	27.02	21.74	27.08	8.35	22.21	13.06	37.18	13.40	4.74	18.61	0.00	5.12	8.78	0.00	7.29	3.65	4.33	9.08	44.42	11.21	0.00
16	ER2a	ExonRegion	1	39.72	30.28	38.23	45.73	43.04	38.42	19.81	31.71	61.42	56.98	84.70	41.60	12.10	64.84	24.16	68.03	81.63	33.31	30.28	33.21	59.89	79.86	73.39
17	E2_Da	NovelBoundary	1	6.08	0.00	23.89	6.93	22.67	7.78	6.05	2.09	15.08	7.44	4.90	0.00	25.97	11.71	33.62	27.69	13.18	14.59	8.85	11.12	5.87	5.57	7.60
18	E2a_E3a	KnownJunction	1	72.53	43.02	49.58	60.96	47.11	105.05	36.70	56.27	73.81	74.19	28.01	57.92	12.99	44.15	34.61	232.76	53.11	78.43	140.62	42.38	23.17	117.38	266.76
19	I2	Intron	0	5.99	4.50	20.16	4.63	17.07	23.80	5.13	3.43	9.64	6.72	9.67	17.16	22.56	34.59	23.20	22.88	17.74	11.80	5.04	5.47	6.97	8.13	12.19
20	I2_AR1	ActiveIntronRegion	0	2.87	2.01	14.89	2.88	15.24	21.13	2.75	0.45	7.21	5.67	10.94	15.31	10.14	35.68	18.85	22.88	17.15	8.38	3.77	3.51	5.25	6.88	10.43
21	I2_SR1	SilentIntronRegion	0	2.06	3.56	15.80	1.73	9.20	22.07	4.32	1.40	4.77	4.79	10.12	5.64	6.67	29.57	22.20	16.76	17.68	6.26	4.27	5.48	6.91	7.95	11.48
22	I2_AR2	ActiveIntronRegion	0	3.23	2.43	17.91	0.40	9.05	6.75	1.54	2.35	6.61	6.80	12.39	14.84	13.15	33.22	23.62	13.00	16.98	9.87	1.45	3.23	6.73	6.64	12.74
23	I2_SR3	SilentIntronRegion	0	1.55	1.50	9.42	1.93	4.74	10.57	3.29	1.13	4.31	3.70	4.74	12.89	15.19	30.57	25.75	17.61	14.85	12.99	2.46	3.11	5.93	4.62	9.32
24	I2_AR4	ActiveIntronRegion	0	6.53	4.35	25.78	8.02	15.71	24.53	4.61	2.62	11.36	6.87	10.41	7.87	17.53	38.87	23.00	23.10	20.21	19.77	7.48	5.62	9.77	6.83	11.77
25	I2_SR4	SilentIntronRegion	0	8.20	5.70	23.27	5.22	23.24	27.64	6.43	5.05	10.74	8.33	10.59	23.11	32.34	35.00	24.51	26.26	18.33	10.72	6.15	6.35	7.38	8.73	14.14
26	I2_AR5	ActiveIntronRegion	0	12.10	15.41	26.65	6.59	32.65	67.46	11.21	10.11	26.34	7.19	13.80	50.07	61.35	64.65	42.90	46.50	29.47	10.25	1.64	10.23	2.43	31.11	14.45
27	I2_SR5	SilentIntronRegion	0	3.97	7.29	13.75	7.41	11.81	17.31	8.65	5.27	18.41	6.74	4.15	26.50	14.76	18.34	4.53	15.01	7.89	8.07	0.00	8.56	2.42	12.70	7.66
28	I2_AR6	ActiveIntronRegion	0	8.58	3.92	17.14	2.62	11.21	16.61	5.34	5.05	11.02	3.94	3.93	9.24	7.16	11.88	5.60	4.31	5.48	5.85	1.28	6.18	2.36	6.71	7.38
29	E3_Aa	NovelBoundary	0	29.12	12.50	22.29	12.92	56.11	29.13	12.98	4.44	15.51	15.02	7.32	6.30	6.33	28.61	8.90	28.37	13.56	14.59	0.00	8.82	6.30	14.88	4.27
30	ER3a	ExonRegion	0	45.29	62.27	91.92	44.52	49.00	162.26	46.01	45.26	59.33	51.88	54.67	70.34	47.18	99.76	62.14	79.87	54.61	36.09	21.72	31.32	39.48	60.20	61.54
31	E3a_E4a	KnownJunction	0	62.97	68.94	113.21	52.54	49.15	97.67	49.24	45.02	84.87	69.95	63.07	37.06	13.31	90.29	83.32	91.94	56.29	56.50	33.88	14.83	68.82	76.30	44.90
32	ER4a	ExonRegion	0	46.72	57.24	109.33	50.68	43.87	162.87	36.77	46.48	62.28	61.03	69.35	44.84	49.53	127.69	88.74	128.97	84.70	62.01	19.81	32.77	72.52	71.78	72.80
33	E4_Da	NovelBoundary	0	16.23	0.00	10.32	2.06	12.73	25.21	12.45	5.87	7.03	5.32	12.42	5.70	17.53	0.00	4.45	11.96	3.74	3.73	0.00	5.56	6.18	9.37	4.35
34	E4a_E5a	KnownJunction	0	67.20	104.52	119.87	65.93	64.60	171.21	32.72	34.05	64.90	74.09	71.33	46.37	19.80	124.90	112.74	112.62	73.68	67.82	8.38	25.76	68.51	59.03	68.21
35	I4	Intron	0	7.07	3.74	6.84	4.82	8.85	10.93	4.46	4.91	6.60	2.56	3.74	12.40	10.96	12.02	8.66	10.39	11.85	3.47	1.09	3.59	1.86	5.72	5.50
36	I4_SR1	SilentIntronRegion	0	7.10	3.76	6.87	4.84	8.90	10.99	4.48	4.93	6.64	2.57	3.76	12.46	11.02	12.07	8.69	10.44	11.91	3.49	1.10	3.60	1.86	5.74	5.52
37	E5_Aa	NovelBoundary	0	8.59	0.00	3.02	13.75	7.64	15.22	6.01	11.09	12.21	15.96	4.47	0.00	6.17	6.95	4.45	12.73	13.00	8.75	0.00	3.26	5.56	7.47	19.97
38	ER5a	ExonRegion	0	59.02	60.03	127.39	46.68	59.25	198.35	38.75	48.31	79.99	68.76	91.39	56.20	42.48	146.84	142.50	122.17	103.53	68.53	24.50	40.18	70.03	66.85	70.99
39	E5a_E6a	KnownJunction	0	80.53	43.61	162.00	46.38	76.57	182.85	47.78	46.87	79.54	74.68	91.39	42.46	41.56	146.63	200.63	139.28	121.08	95.67	35.67	44.42	83.28	93.01	92.79
40	ER6a	ExonRegion	0	78.14	52.95	168.63	61.08	66.07	166.14	49.99	59.32	101.99	81.78	114.09	90.34	71.16	192.34	158.76	167.03	116.24	107.98	23.15	53.56	88.65	108.90	102.63
41	E6_Da	NovelBoundary	0	0.00	9.27	3.61	1.50	8.66	13.63	8.52	10.06	1.79	7.01	6.63	12.60	0.00	2.47	0.00	8.72	4.39	2.49	4.80	5.24	6.30	4.96	14.08
42	E6a_E7a	KnownJunction	0	102.31	62.36	195.23	62.20	60.36	213.23	49.55	82.15	123.47	102.99	119.24	78.93	75.32	167.05	227.83	129.71	120.43	96.96	13.46	54.20	87.41	87.26	92.88
43	E7_Da	NovelBoundary	0	34.45	15.39	99.58	22.91	13.67	95.97	33.30	35.57	47.48	34.03	47.12	34.81	21.43	52.21	24.23	71.18	42.45	30.18	27.29	21.28	47.57	27.00	22.96
44	ER7a	ExonRegion	0	73.46	40.87	173.81	44.58	54.81	169.95	41.43	69.08	103.99	83.32	102.63	106.42	56.58	172.21	160.41	122.05	106.80	88.69	26.92	48.04	85.16	75.34	73.70
45	E7_Ab	KnownBoundary	0	37.41	8.35	61.35	11.72	36.16	70.07	16.52	28.55	31.74	25.60	33.85	13.95	0.00	52.33	52.54	49.13	58.72	37.85	3.86	31.96	22.80	22.47	12.80
46	ER7b	ExonRegion	1	65.61	29.69	183.32	37.34	56.19	162.84	38.92	66.03	98.32	67.21	87.37	107.37	26.26	178.33	142.16	120.67	116.19	88.32	24.85	50.64	76.69	62.92	48.16
47	ER7c	ExonRegion	1	51.91	30.40	140.27	39.13	52.06	166.81	30.56	38.47	78.27	52.27	92.75	91.21	22.58	148.90	142.46	122.76	109.88	83.68	22.57	43.85	69.62	67.10	62.27
48	E7_Db	NovelBoundary	0	37.34	28.55	94.23	34.69	28.52	121.35	22.08	15.20	44.30	41.69	62.44	56.42	41.88	98.65	62.55	69.73	57.50	50.08	15.44	28.63	51.52	43.48	56.17
49	E7_Dc	NovelBoundary	0	14.82	5.92	26.76	5.49	7.72	10.28	24.02	11.09	7.96	14.05	25.53	27.76	6.82	42.38	36.59	45.63	13.84	14.38	4.80	15.79	6.24	5.39	15.96
50	E7c_E8a	KnownJunction	0	13.04	6.45	25.90	6.86	3.82	44.92	3.62	4.23	13.08	5.86	9.74	6.75	26.13	14.42	18.05	15.04	27.86	13.43	4.05	0.00	7.78	13.23	4.18
51	E7c_E8b	KnownJunction	0	33.34	12.04	61.23	31.26	16.55	71.49	15.02	5.83	39.53	19.93	37.27	49.37	21.26	43.09	56.86	31.79	34.41	36.35	3.95	23.84	25.39	36.01	34.32
52	E7c_E9a	NovelJunction	0	3.78	5.99	22.44	10.65	11.04	21.46	8.61	8.46	16.44	14.21	7.05	11.85	6.82	5.00	11.99	11.45	0.00	9.78	0.00	6.20	0.00	0.00	0.00
53	E7c_E10a	KnownJunction	0	0.00	2.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.96	0.00	0.00	0.00	0.00	0.00	0.00	3.12	11.52
54	ER7d	ExonRegion	0	36.74	27.89	102.49	38.06	25.61	126.66	19.86	14.07	58.05	34.90	65.30	64.63	35.51	96.75	94.29	66.02	75.68	62.82	12.97	25.23	44.55	54.47	58.31
55	I7	Intron	0	19.99	13.83	15.18	3.84	8.09	36.02	6.50	5.84	6.26	9.68	20.45	15.11	7.61	36.89	26.37	26.95	24.94	15.62	6.02	12.86	9.99	11.02	12.20
56	I7_AR1	ActiveIntronRegion	1	20.27	14.01	15.40	3.88	8.15	36.54	6.60	5.93	6.34	9.83	20.75	15.33	7.72	37.44	26.74	27.33	25.29	15.84	6.08	13.04	10.12	11.17	12.39
57	E8_Aa	NovelBoundary	0	3.78	9.27	12.21	2.06	8.40	9.09	5.70	17.21	15.02	7.15	11.63	0.00	7.30	23.54	0.00	31.10	12.16	23.79	0.00	5.82	0.00	8.88	12.55
58	E8_Ab	NovelBoundary	0	3.41	5.92	9.61	3.43	0.00	2.16	1.72	2.34	5.76	10.02	4.53	0.00	0.00	14.83	10.14	8.54	3.55	21.51	7.91	2.49	5.99	2.94	0.00
59	ER8a	ExonRegion	0	14.82	9.66	37.07	12.95	6.69	71.06	7.94	6.91	24.08	15.20	20.78	16.24	25.80	52.78	31.91	25.26	42.91	21.71	3.98	9.57	15.43	31.77	13.95
60	ER8b	ExonRegion	0	40.87	16.08	73.45	23.21	18.03	132.34	22.41	17.95	46.73	31.27	50.26	40.03	26.48	104.19	109.00	75.95	71.15	39.40	11.12	28.51	45.53	59.81	46.26
61	E8_Da	NovelBoundary	0	24.00	15.06	26.76	3.46	12.14	27.77	14.09	4.39	13.86	12.03	14.53	13.80	0.00	57.98	28.93	37.00	26.37	16.54	3.58	27.93	11.92	0.00	3.59
62	E8a_E9a	KnownJunction	0	78.24	21.58	97.93	21.24	18.68	163.88	22.04	30.52	43.14	31.21	31.96	49.07	47.07	94.24	114.96	50.41	61.52	38.68	16.38	22.56	38.36	35.88	34.32
63	I8	Intron	0	10.68	10.26	5.12	1.14	7.50	16.44	4.45	1.44	4.13	4.79	9.75	2.00	2.16	21.31	20.95	24.99	16.65	7.21	5.36	7.15	6.18	7.01	6.58
64	I8_AR1	ActiveIntronRegion	0	10.89	10.49	5.22	1.16	7.67	16.81	4.55	1.48	4.20	4.87	9.97	2.04	2.21	21.79	21.42	25.55	17.02	7.37	5.48	7.32	6.29	7.16	6.73
65	E9_Aa	NovelBoundary	0	36.15	11.71	38.05	5.09	22.67	35.83	29.01	4.31	24.71	24.20	26.59	0.00	0.00	31.61	32.26	32.47	30.01	23.75	0.00	14.96	14.58	13.90	30.39
66	ER9a	ExonRegion	0	62.50	37.17	94.68	39.36	39.44	162.87	31.18	33.52	76.11	51.22	68.56	42.10	27.23	148.96	144.80	97.16	95.46	82.62	20.10	44.97	63.75	60.51	74.32
67	E9_Da	NovelBoundary	1	23.93	12.76	40.89	22.64	15.28	67.29	15.37	4.81	38.51	21.25	25.53	5.40	6.66	64.69	31.15	72.12	17.86	16.50	20.14	22.24	20.57	22.04	40.29
68	E9a_E10a	KnownJunction	0	77.79	30.52	86.07	54.54	30.56	152.13	18.28	31.96	66.67	41.18	32.53	24.76	32.79	74.11	129.30	65.28	78.63	59.53	17.51	8.18	43.99	70.60	49.00
69	I9	Intron	0	23.28	15.72	18.92	5.72	22.62	42.18	14.92	11.01	11.88	16.47	12.83	30.38	27.71	31.16	22.59	21.89	18.61	9.35	3.47	13.15	8.41	14.77	8.81
70	I9_AR1	ActiveIntronRegion	0	23.36	15.77	18.98	5.74	22.70	42.32	14.98	11.05	11.92	16.53	12.87	30.47	27.81	31.26	22.67	21.96	18.67	9.38	3.49	13.20	8.44	14.82	8.84
71	E10_Aa	NovelBoundary	0	31.71	42.16	55.97	14.72	24.11	21.46	9.63	15.07	14.70	24.26	14.37	38.71	22.40	18.54	42.90	15.12	19.64	13.80	0.00	23.14	14.76	10.84	24.24
72	ER10a	ExonRegion	0	86.12	53.35	137.96	44.65	43.13	156.16	27.10	39.42	79.35	55.95	67.84	47.50	34.39	131.66	159.36	91.55	67.38	69.45	21.35	39.40	68.24	64.80	64.90
73	E10_Da	NovelBoundary	0	88.98	139.38	33.56	13.09	10.53	61.84	15.77	24.48	26.53	27.59	7.63	12.15	12.99	27.08	31.15	25.21	0.00	26.74	4.52	15.02	8.03	10.84	11.10
74	E10a_E11a	KnownJunction	0	42.08	2.70	75.96	6.73	24.02	70.75	16.34	10.56	11.63	10.23	28.22	24.31	19.48	90.29	80.60	56.31	24.40	41.83	22.87	33.62	7.97	45.56	39.61
75	E10a_E12a	KnownJunction	0	80.38	48.81	110.67	56.60	60.87	173.25	37.89	51.84	85.18	53.40	44.70	44.41	21.91	86.41	149.95	150.13	70.59	82.45	34.54	23.59	69.99	69.50	51.05
76	E11_Aa	NovelBoundary	0	128.24	172.34	88.08	21.08	28.95	516.29	32.02	156.70	111.08	75.67	26.38	43.06	46.91	40.67	46.73	32.13	20.38	30.34	6.96	34.58	19.09	31.17	37.39
77	ER11a	ExonRegion	0	38.24	7.19	65.11	5.36	12.67	59.78	12.36	7.95	14.41	13.99	31.96	15.59	14.07	72.98	59.38	52.11	28.61	34.74	15.50	26.38	7.93	31.53	33.09
78	ER11b	ExonRegion	0	18.40	3.90	44.55	7.36	16.64	30.34	5.05	12.63	11.77	11.31	15.75	6.03	8.85	29.29	43.96	14.25	26.08	20.24	6.69	11.01	9.49	16.92	14.12
79	E11_Db	NovelBoundary	0	159.95	139.98	48.61	6.76	47.54	294.55	30.69	90.77	78.47	46.12	25.74	6.30	0.00	48.03	21.39	11.96	9.54	44.02	0.00	50.43	22.86	20.39	35.85
80	E11b_E12a	KnownJunction	1	124.10	20.00	83.94	5.86	86.16	68.54	15.68	32.45	21.93	23.48	34.06	49.37	33.76	60.45	129.92	63.06	66.29	36.52	22.97	20.39	19.40	42.43	33.97
81	E12_Aa	NovelBoundary	0	202.26	108.20	64.60	17.18	15.53	484.32	17.89	136.65	114.87	68.58	16.48	11.85	6.82	28.37	33.01	47.34	27.40	55.01	4.80	56.82	15.51	14.21	61.55
82	ER12a	ExonRegion	0	31.91	12.54	23.16	9.67	12.39	35.18	6.56	9.75	11.68	10.97	10.28	5.63	7.40	16.99	26.74	20.07	11.38	11.91	4.40	5.72	11.77	15.51	8.26
83	E12_Da	KnownBoundary	0	54.90	20.13	11.06	6.59	38.79	45.54	5.83	13.88	11.34	4.43	2.42	0.00	0.00	13.48	15.82	11.02	3.83	4.23	0.00	9.20	6.80	5.57	11.69
84	E12_Db	KnownBoundary	0	11.04	57.10	0.00	0.00	8.15	238.10	0.00	19.84	19.36	6.77	5.37	6.30	0.00	0.00	0.00	0.00	0.00	4.64	0.00	18.54	5.62	0.00	8.45
85	ER12b	ExonRegion	0	6.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00	0.00
86	ER12c	ExonRegion	1	7.84	8.09	0.00	0.00	4.18	6.71	8.10	0.00	0.39	0.00	3.29	27.12	25.79	19.99	44.68	9.70	6.10	1.31	9.05	9.08	4.18	2.37	12.30
87	E12_Dc	KnownBoundary	0	9.93	38.28	4.91	0.00	0.00	95.85	0.00	4.48	17.10	3.12	0.00	7.65	0.00	0.00	0.00	3.85	0.00	1.95	0.00	5.11	2.84	2.76	4.27
88	ER12d	ExonRegion	0	0.99	0.00	0.00	0.00	0.00	0.54	0.00	0.00	0.22	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.35