Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPP4R1 Gene 0 113.21 210.96 255.96 108.90 254.86 303.91 285.69 159.98 133.15 215.30 215.67 131.90 142.66 155.46 122.58 126.04 91.40 214.80 103.19 153.06 155.00 196.25 149.81 2 400555 Transcript 0 3.52 13.79 6.38 2.96 18.19 38.31 16.56 5.44 13.85 12.76 12.20 9.00 6.41 8.14 0.00 3.25 3.48 32.44 11.58 7.38 22.33 11.54 11.73 3 400556 Transcript 0 1.48 10.92 9.16 4.79 9.93 17.62 20.46 11.70 10.60 18.86 39.35 4.94 5.75 29.10 12.45 29.50 17.87 27.88 4.48 2.28 23.31 22.39 7.84 4 285124 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.00 3.05 0.61 0.00 0.22 1.83 0.00 0.00 0.00 0.00 1.13 0.00 0.00 1.62 0.00 0.00 2.20 1.54 0.00 0.00 1.47 1.04 3.92 6 ER1b ExonRegion 1 7.54 15.53 5.30 2.10 24.75 61.09 45.16 3.82 6.76 12.29 22.11 0.49 0.00 31.12 3.74 24.04 16.79 32.10 7.84 27.10 22.64 20.16 27.05 7 E1a_E2a KnownJunction 0 21.04 72.22 11.47 5.63 83.96 185.86 237.64 12.69 20.95 42.84 33.43 11.40 7.63 26.49 10.26 39.99 28.24 102.27 37.65 90.44 40.03 22.23 52.33 8 ER2a ExonRegion 1 11.01 47.95 17.45 8.48 72.84 139.98 143.61 24.24 34.47 48.20 40.38 5.10 5.32 38.04 10.64 45.84 29.34 105.24 28.60 56.26 51.08 32.50 46.79 9 E2a_E3a KnownJunction 0 2.96 10.98 8.52 4.13 10.95 13.23 21.51 11.87 10.91 14.02 35.54 5.55 6.82 26.25 16.19 28.28 22.53 21.89 4.71 2.43 23.85 19.78 3.93 10 E2a_E3c KnownJunction 0 7.04 24.54 12.15 5.93 36.16 74.79 33.12 10.88 27.69 25.52 23.27 18.01 12.82 14.66 0.00 6.49 4.77 63.34 23.15 14.76 43.18 22.04 19.55 11 I2_SR1 SilentIntronRegion 1 1.14 10.17 2.78 7.81 2.68 5.50 19.25 8.04 2.71 5.03 0.00 4.16 30.49 0.94 0.00 0.00 0.00 3.70 8.58 8.51 0.00 0.00 3.61 12 ER3a ExonRegion 1 0.00 10.85 9.80 5.45 8.92 22.01 19.42 11.52 10.29 23.70 43.17 4.33 4.69 31.94 8.70 30.71 13.20 33.88 4.25 2.13 22.77 25.00 11.75 13 ER3b ExonRegion 1 0.65 14.82 10.40 6.70 7.15 33.94 33.26 13.62 16.18 27.32 63.63 22.44 18.76 32.35 8.23 18.08 22.23 36.80 26.78 27.70 45.15 30.96 36.44 14 E3_Ac KnownBoundary 0 3.19 9.14 12.98 11.19 11.46 21.75 67.35 15.73 22.40 36.80 73.70 56.57 18.99 19.60 8.90 28.37 29.17 36.11 52.24 60.34 49.73 48.56 71.36 15 ER3c ExonRegion 1 6.70 42.56 43.22 23.04 56.57 52.77 73.64 43.54 53.08 79.61 118.80 57.52 23.62 106.24 25.01 82.87 61.66 129.78 35.65 75.66 104.05 83.86 106.73 16 E3a_E4a KnownJunction 1 12.74 48.35 58.57 29.07 43.21 81.09 81.97 58.98 58.88 105.89 146.98 84.93 44.64 162.11 41.04 126.80 92.01 151.64 59.95 118.12 110.52 136.67 149.81 17 ER4a ExonRegion 1 15.82 78.61 59.50 39.26 100.65 130.89 113.48 82.97 81.17 129.18 176.63 103.99 74.56 128.31 27.63 98.83 100.60 192.56 56.77 122.87 154.36 140.39 137.23 18 E4a_E5a KnownJunction 1 34.30 108.86 71.91 56.17 177.42 189.83 166.98 107.37 103.07 132.16 149.93 126.64 131.00 135.09 26.82 95.96 112.01 194.29 61.55 91.72 152.34 130.00 102.61 19 ER5a ExonRegion 1 36.53 109.30 104.90 58.00 157.55 225.71 234.50 109.07 112.15 160.15 223.91 158.19 128.76 180.87 61.03 135.57 107.27 239.91 53.15 178.38 191.54 192.35 147.06 20 E5a_E6a KnownJunction 0 37.49 134.71 106.38 65.13 123.09 162.35 205.14 122.89 107.23 151.21 213.05 155.60 111.68 161.99 74.79 76.99 97.34 272.68 52.61 186.83 175.32 237.28 161.42 21 ER6a ExonRegion 1 41.86 169.82 117.69 53.35 143.93 172.99 193.35 102.86 112.20 165.06 227.20 149.00 126.15 169.01 52.97 115.87 103.11 278.70 55.23 193.49 187.39 198.27 147.35 22 E6a_E7a KnownJunction 0 45.93 196.48 111.53 54.07 157.13 223.00 248.86 92.66 113.16 189.19 256.64 177.66 113.79 149.51 71.57 98.35 122.67 206.40 67.95 209.39 212.95 213.22 127.45 23 ER7a ExonRegion 1 32.59 168.60 113.02 48.87 152.07 224.78 232.54 98.14 91.36 170.77 199.34 140.67 139.05 187.12 62.51 118.00 114.55 251.88 71.79 187.21 178.07 212.35 130.60 24 E7a_E8a KnownJunction 1 27.12 163.26 120.13 79.28 171.73 331.97 278.27 106.92 122.63 216.18 254.85 87.78 122.39 181.12 54.89 158.25 142.12 303.02 120.66 214.19 171.80 227.30 154.59 25 ER8a ExonRegion 1 30.88 144.20 121.07 67.59 200.03 281.15 252.11 99.99 117.92 202.64 254.26 159.40 125.56 196.89 55.08 145.90 152.54 296.34 127.61 187.23 219.47 236.89 194.13 26 E8a_E9a KnownJunction 1 26.82 170.89 100.77 66.69 250.85 269.39 268.86 109.17 96.18 170.52 215.32 159.65 161.19 219.61 52.04 184.91 134.92 291.17 138.83 235.60 199.60 272.98 189.25 27 ER9a ExonRegion 1 35.91 173.98 102.08 58.92 152.62 222.99 224.54 96.74 100.36 167.86 174.63 158.94 188.96 177.33 52.99 136.74 97.82 193.65 81.26 147.57 132.33 182.50 138.67 28 E9a_E10a KnownJunction 1 64.68 235.88 131.96 63.40 239.05 278.19 329.23 115.79 126.65 197.19 256.22 144.35 219.63 216.73 68.98 141.33 101.54 178.46 76.99 140.04 159.63 198.76 185.58 29 ER10a ExonRegion 1 65.96 178.19 118.77 56.95 219.39 309.77 264.12 120.99 116.07 214.69 246.94 193.00 255.90 210.77 66.37 146.98 92.92 202.04 94.52 134.18 152.31 197.59 158.12 30 E10a_E11a KnownJunction 0 121.58 187.27 164.81 60.33 260.02 330.15 255.79 156.04 167.19 247.13 333.19 193.56 257.78 197.95 92.22 242.16 115.10 245.86 153.70 180.12 192.87 266.86 220.49 31 I10 Intron 0 3.48 16.07 6.18 8.30 14.22 15.10 37.58 12.29 19.28 12.52 6.78 13.60 20.48 5.15 2.99 5.54 4.73 16.83 7.11 40.00 5.01 10.20 6.19 32 I10_SR1 SilentIntronRegion 0 1.66 9.40 2.82 3.78 7.07 10.74 28.38 5.73 12.21 7.67 5.58 10.38 13.16 4.82 1.64 5.26 3.85 12.81 4.50 32.45 3.86 6.11 4.78 33 I10_AR1 ActiveIntronRegion 0 6.23 28.79 11.66 14.85 15.44 21.75 53.83 23.29 31.34 18.70 14.03 30.88 36.74 3.58 5.47 6.47 4.37 14.81 4.95 58.73 5.32 22.07 6.14 34 I10_SR2 SilentIntronRegion 0 4.87 23.36 11.43 7.24 22.78 28.57 63.79 20.10 20.69 17.96 13.66 24.78 46.10 2.84 3.70 2.89 1.69 10.70 2.31 40.03 11.11 16.89 9.89 35 I10_AR2 ActiveIntronRegion 0 9.73 24.51 14.17 12.63 31.71 22.54 61.87 23.72 38.56 29.76 11.35 18.64 37.81 10.63 4.17 10.26 13.63 53.05 25.13 81.76 14.74 20.05 16.80 36 E11_Aa NovelBoundary 0 51.79 134.32 55.35 32.43 88.03 82.23 126.66 33.72 41.58 19.56 67.60 25.96 12.66 12.83 15.58 49.22 24.40 33.37 91.30 71.27 46.52 86.89 37.65 37 ER11a ExonRegion 0 101.22 204.73 155.40 79.71 290.53 403.65 357.31 168.19 146.20 248.46 258.18 181.67 265.76 189.36 96.57 161.49 118.68 242.31 129.82 166.77 184.81 247.45 171.80 38 E11a_E12a KnownJunction 0 100.09 193.26 207.33 87.90 237.69 318.45 271.73 141.87 140.16 231.63 186.99 149.90 225.31 153.81 67.00 89.81 87.98 223.23 108.80 97.41 145.98 162.21 122.33 39 ER12a ExonRegion 0 83.36 188.32 189.78 102.83 259.93 341.96 318.13 146.24 157.81 228.10 254.15 191.20 219.37 169.69 97.03 142.80 116.91 212.47 88.44 164.12 145.43 214.42 152.15 40 E12a_E13a KnownJunction 1 97.65 192.60 200.29 87.70 178.86 312.09 273.85 133.70 113.54 238.80 236.43 211.72 356.63 174.64 108.91 176.11 109.49 243.12 50.82 187.47 113.92 236.42 189.93 41 ER13a ExonRegion 0 91.69 205.62 205.25 118.16 227.27 343.30 280.51 152.37 149.06 219.74 254.58 263.96 243.74 164.43 102.63 124.30 110.68 261.32 98.05 191.67 125.54 195.81 176.78 42 E13a_E14a KnownJunction 0 136.76 349.67 273.56 191.15 351.02 312.49 449.71 205.86 173.09 261.15 344.35 276.69 241.70 229.09 141.54 136.72 182.23 317.86 147.11 222.43 186.63 285.59 217.68 43 ER14a ExonRegion 0 101.43 238.28 268.06 140.41 270.96 281.15 342.40 162.31 157.00 233.78 276.62 215.73 218.84 193.10 106.13 144.37 128.93 311.43 121.22 201.11 202.87 218.96 181.90 44 E14a_E15a KnownJunction 0 118.32 296.79 264.15 151.33 386.33 396.25 459.12 130.86 139.38 242.03 311.08 166.70 157.29 247.75 141.42 145.09 118.37 345.02 132.43 202.49 203.80 232.56 211.53 45 ER15a ExonRegion 0 132.56 381.64 264.53 151.81 382.38 374.40 428.42 160.40 143.63 260.28 248.41 136.24 140.79 183.57 112.67 130.20 119.32 235.59 120.97 167.19 174.91 232.94 155.62 46 E15a_E16a KnownJunction 0 266.20 472.61 348.30 204.24 611.72 503.46 621.28 213.95 181.68 289.03 277.81 141.80 149.18 144.33 114.22 144.41 96.21 145.63 101.65 168.42 98.66 275.80 157.75 47 ER16a ExonRegion 0 130.16 270.57 339.12 194.88 370.23 340.05 381.06 220.61 178.81 290.85 233.06 92.76 170.47 140.46 125.56 99.76 82.56 107.22 94.84 133.68 78.05 209.75 110.63 48 E16a_E17a KnownJunction 0 131.28 255.61 382.48 211.69 318.08 238.10 317.75 228.66 188.74 330.54 235.95 135.19 97.72 150.33 163.92 64.77 73.87 81.91 101.46 139.60 104.90 195.40 106.70 49 ER17a ExonRegion 0 162.92 328.62 371.74 185.06 408.20 417.20 401.05 220.43 171.94 276.25 260.59 162.91 135.89 165.24 156.19 125.47 92.70 190.81 114.52 168.88 176.35 259.46 142.73 50 E17a_E18a KnownJunction 0 157.58 496.95 386.18 217.09 451.61 434.52 515.51 218.60 174.56 257.74 227.37 109.39 190.41 180.06 198.28 156.45 92.19 288.23 168.19 165.42 266.01 195.82 168.93 51 ER18a ExonRegion 0 136.26 339.68 346.63 139.58 273.98 357.71 367.82 194.70 150.14 245.68 230.85 135.66 122.53 186.74 191.22 137.16 86.19 332.47 126.47 179.18 264.38 200.05 172.28 52 E18a_E19a KnownJunction 0 198.18 353.23 356.58 151.10 307.56 392.90 343.81 184.63 145.46 215.16 236.90 133.54 123.04 190.01 169.73 111.77 100.33 322.76 174.41 230.23 292.82 221.42 186.26 53 ER19a ExonRegion 0 203.01 298.69 455.00 148.78 267.69 384.21 319.11 204.86 168.25 244.78 268.71 76.28 89.11 187.80 190.65 158.03 77.69 363.67 141.19 189.59 240.55 208.54 211.07 54 E19a_E20a KnownJunction 1 300.57 370.86 501.82 150.66 433.02 488.64 553.54 208.66 187.93 221.02 263.75 84.78 61.52 193.95 284.57 180.29 94.62 363.71 168.00 230.42 220.17 250.20 258.39 55 ER20a ExonRegion 0 184.92 236.30 426.59 151.26 312.86 331.35 289.99 213.45 149.28 242.95 198.17 92.41 85.98 127.46 200.69 119.48 69.67 181.30 121.84 142.92 129.08 191.87 149.75 56 ER20b ExonRegion 0 0.00 0.00 2.14 1.36 0.67 1.83 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.00 0.00 0.00