Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C18orf10 Gene 0 135.04 620.59 1133.16 400.80 379.44 794.25 480.56 426.08 294.90 454.37 338.49 154.75 134.12 260.31 176.68 243.78 322.14 651.99 263.14 459.42 199.08 284.12 146.33 2 334295 Transcript 0 5.71 13.57 7.22 3.12 2.72 30.81 16.37 2.59 1.12 6.18 4.95 0.00 0.64 3.92 4.20 3.92 4.88 7.69 2.24 3.92 5.01 4.07 3.77 3 415958 Transcript 0 1.33 21.31 25.14 8.68 9.41 12.77 13.44 7.55 8.83 9.18 8.73 13.95 0.35 17.02 6.02 4.84 5.75 28.40 21.35 25.22 7.51 2.01 2.61 4 383056 Transcript 0 3.78 23.68 20.82 11.15 7.98 26.18 0.00 12.49 17.51 14.16 4.53 0.00 0.00 3.00 0.00 8.29 7.67 86.39 23.44 58.74 7.91 8.76 0.00 5 ER1a ExonRegion 0 5.71 13.57 7.22 3.12 2.72 30.81 16.37 2.59 1.12 6.18 4.95 0.00 0.64 3.92 4.20 3.92 4.88 7.69 2.24 3.92 5.01 4.07 3.77 6 E1_Ab KnownBoundary 0 83.27 169.05 73.45 39.46 50.42 509.42 256.19 38.57 16.81 62.70 56.49 0.00 6.66 53.80 38.45 65.62 75.55 204.86 55.53 56.06 68.39 66.68 65.81 7 ER1b ExonRegion 1 49.31 141.06 172.57 52.14 89.16 339.33 180.97 70.67 59.10 105.14 127.89 10.07 7.55 88.51 53.25 80.71 101.56 245.79 66.49 163.81 86.62 80.49 61.21 8 E1a_E2a KnownJunction 0 73.79 224.83 457.08 186.72 186.67 414.70 193.65 228.49 151.04 243.66 161.36 66.02 66.23 128.20 60.82 111.34 127.16 516.92 82.64 179.16 112.25 158.41 102.69 9 ER2a ExonRegion 0 110.59 325.70 688.11 229.49 232.76 718.32 356.84 298.16 222.09 400.91 431.30 102.23 111.10 241.20 140.17 177.29 376.01 628.58 205.18 469.95 262.41 252.99 157.99 10 E2a_E3a KnownJunction 1 190.26 589.50 1220.77 363.12 241.34 828.56 454.35 450.05 337.70 578.20 796.83 119.59 128.40 337.04 229.56 228.49 709.49 801.54 355.30 914.21 389.20 335.80 189.85 11 ER3a ExonRegion 0 169.66 688.57 1201.60 411.89 314.86 738.29 413.89 461.20 394.21 570.99 656.55 186.22 205.72 386.74 243.54 342.17 572.71 1082.76 377.61 769.77 342.08 398.71 216.78 12 E3a_E4a KnownJunction 0 212.78 657.45 1275.83 447.46 417.40 909.59 533.04 480.85 407.46 613.66 585.46 234.98 158.27 318.85 173.81 309.32 438.52 1032.69 218.55 684.55 342.99 382.65 164.15 13 E3a_E5a KnownJunction 0 3.78 23.68 20.82 11.15 7.98 26.18 0.00 12.49 17.51 14.16 4.53 0.00 0.00 3.00 0.00 8.29 7.67 86.39 23.44 58.74 7.91 8.76 0.00 14 ER4a ExonRegion 0 180.82 675.97 1570.45 544.19 509.14 1317.14 702.46 556.44 457.87 659.68 618.81 309.37 219.34 436.11 282.93 426.05 539.33 1273.56 401.41 717.73 383.38 488.87 268.37 15 E4a_E5a KnownJunction 0 220.11 1114.28 2172.87 764.24 482.17 1135.31 855.96 724.75 567.09 836.11 637.79 397.63 251.61 574.14 383.46 678.37 629.45 1650.22 691.41 988.61 486.19 840.49 431.08 16 ER5a ExonRegion 0 172.18 688.19 2076.82 749.91 594.02 1322.75 740.56 672.96 547.04 817.65 716.31 352.66 260.83 490.53 337.61 540.93 666.09 1522.03 517.34 879.56 455.65 586.66 287.07 17 E5a_E6a KnownJunction 0 300.94 811.57 2379.90 792.94 643.97 1196.58 611.39 753.96 629.48 874.46 561.19 438.14 236.51 601.45 397.06 541.23 573.82 1807.33 663.08 891.71 460.55 525.87 358.95 18 ER6a ExonRegion 0 193.96 859.41 1846.47 665.56 468.74 1204.98 620.19 705.32 497.53 777.43 639.27 350.36 278.14 508.25 311.28 466.96 625.96 1422.17 516.42 798.40 418.13 472.30 296.18 19 E6a_E7a KnownJunction 0 295.61 1173.61 1334.43 612.61 622.92 1350.36 772.71 551.25 437.73 589.62 518.76 135.79 134.08 384.72 178.50 506.02 577.65 1535.56 637.10 676.12 330.69 510.93 260.19 20 ER6b ExonRegion 0 1.33 21.31 25.14 8.68 9.41 12.77 13.44 7.55 8.83 9.18 8.73 13.95 0.35 17.02 6.02 4.84 5.75 28.40 21.35 25.22 7.51 2.01 2.61 21 I6 Intron 0 21.38 138.87 172.85 52.25 29.17 67.36 61.00 30.15 22.94 28.17 19.33 27.32 21.50 23.37 10.17 18.67 28.69 64.65 35.85 92.59 10.73 23.35 12.54 22 I6_AR2 ActiveIntronRegion 0 39.28 297.95 315.81 92.98 35.45 71.50 75.56 53.46 36.49 46.08 27.14 47.80 34.29 25.99 15.25 28.86 43.15 76.71 41.29 141.55 10.03 36.17 12.22 23 E7_Aa NovelBoundary 0 47.27 547.34 397.12 97.86 69.02 37.99 70.09 58.49 30.58 49.72 7.74 17.56 12.34 20.07 13.35 27.26 43.20 85.35 58.64 131.99 5.81 35.15 24.24 24 ER7a ExonRegion 0 172.25 880.46 1449.46 515.20 522.12 936.45 620.88 554.53 352.18 543.18 318.88 162.58 151.45 275.41 199.14 254.27 322.51 588.61 292.20 494.61 173.34 314.79 143.35 25 IG50 Intergenic 0 11.00 8.99 31.68 14.52 19.61 15.58 23.97 14.85 12.00 17.44 19.23 22.89 18.20 16.56 7.81 24.43 16.73 12.34 11.88 10.96 7.13 20.21 13.97 26 IG50_AR18 ActiveIntergenicRegion 0 12.38 12.33 62.37 13.87 23.76 25.04 45.31 25.66 21.12 34.84 56.97 47.34 43.02 47.33 14.62 67.92 49.87 31.81 13.57 17.40 17.09 31.73 22.07 27 IG50_AR17 ActiveIntergenicRegion 0 8.47 8.13 76.52 23.77 37.46 42.79 42.81 31.50 21.82 20.64 54.12 41.37 43.25 48.36 12.25 59.44 45.85 16.01 24.42 16.31 20.08 25.47 26.10 28 IG50_AR16 ActiveIntergenicRegion 0 8.90 16.18 74.83 23.20 38.68 40.14 52.90 31.70 20.04 31.62 53.81 41.92 59.90 52.75 19.45 47.89 38.71 12.05 21.79 12.72 14.12 28.98 23.23 29 IG50_AR15 ActiveIntergenicRegion 0 10.73 12.93 85.34 21.12 30.01 31.44 45.01 30.37 19.85 34.08 50.81 20.41 40.87 59.05 24.66 50.53 29.47 13.46 25.48 21.88 20.46 41.08 15.31 30 IG50_AR14 ActiveIntergenicRegion 0 14.46 11.69 120.39 16.92 51.62 27.97 47.17 28.30 25.42 29.48 49.93 30.49 43.97 65.17 27.20 63.53 29.71 13.01 29.73 21.90 15.61 36.98 11.99 31 IG50_AR13 ActiveIntergenicRegion 0 21.17 14.57 112.33 16.35 54.85 30.87 54.50 24.20 27.17 23.89 44.13 38.24 60.19 50.89 20.79 58.45 20.91 16.94 19.11 19.86 7.35 30.56 9.79 32 IG50_AR12 ActiveIntergenicRegion 0 18.75 22.51 90.85 11.10 28.10 25.54 45.87 14.82 21.88 18.02 33.96 40.82 59.63 23.78 26.73 51.16 34.42 11.88 7.05 20.36 0.00 24.85 8.18 33 IG50_AR11 ActiveIntergenicRegion 0 16.23 19.32 77.40 7.72 19.18 23.53 36.85 9.51 17.29 14.34 23.84 51.95 44.56 22.74 20.31 44.58 30.26 8.31 6.37 18.79 0.00 17.36 9.79 34 IG50_SR8 SilentIntergenicRegion 0 6.51 10.53 25.80 4.19 11.25 10.20 17.11 4.39 8.27 6.73 9.66 28.42 19.60 11.58 6.10 21.03 14.56 6.44 5.88 9.49 0.00 8.65 7.61 35 IG50_AR10 ActiveIntergenicRegion 0 25.20 23.79 114.86 19.40 31.36 31.65 52.94 28.97 18.28 24.26 42.88 51.86 29.70 38.06 22.73 55.34 36.42 20.03 15.03 23.30 14.35 32.86 15.05 36 IG50_SR7 SilentIntergenicRegion 0 5.97 8.44 10.44 8.91 13.83 4.45 20.74 6.86 7.93 10.58 7.72 17.90 14.37 8.13 4.35 20.96 7.50 7.56 8.98 8.33 2.58 7.99 9.20 37 IG50_AR9 ActiveIntergenicRegion 0 8.44 5.48 16.91 8.81 8.47 9.89 13.66 13.59 9.71 9.22 18.58 12.84 12.42 15.97 4.32 20.21 19.74 17.01 12.70 7.48 4.90 13.19 12.05 38 IG50_SR6 SilentIntergenicRegion 0 4.97 7.03 12.97 6.63 7.86 7.65 13.25 11.52 5.50 9.21 6.31 6.80 18.09 5.78 4.65 12.01 1.48 4.85 4.97 10.36 1.96 13.12 10.82 39 IG50_AR8 ActiveIntergenicRegion 0 7.38 9.31 15.57 10.77 17.10 11.76 20.06 12.64 8.41 11.91 11.80 23.00 16.65 12.13 4.48 20.18 15.43 8.78 9.88 9.26 4.53 14.01 9.85 40 IG50_AR7 ActiveIntergenicRegion 0 12.41 10.63 25.80 20.19 19.68 13.93 25.27 17.26 12.40 18.93 11.57 28.31 18.66 7.58 3.29 13.54 8.66 8.69 4.00 11.67 1.53 26.62 8.28 41 IG50_AR6 ActiveIntergenicRegion 0 8.47 14.55 43.36 29.14 48.58 13.82 33.30 17.28 12.16 20.38 16.65 18.32 21.65 9.74 9.15 13.72 11.17 6.40 0.00 18.66 6.27 26.28 13.10 42 IG50_SR5 SilentIntergenicRegion 0 17.03 11.47 40.47 24.07 24.45 22.31 25.80 17.10 14.98 19.02 11.57 21.50 15.50 11.13 7.36 24.08 9.86 12.68 7.29 12.51 5.83 22.64 15.70 43 IG50_AR5 ActiveIntergenicRegion 0 21.35 8.93 69.24 18.99 25.60 15.19 24.35 18.59 15.68 26.24 39.97 22.86 14.36 21.01 19.83 34.17 22.53 17.41 32.26 13.26 21.18 45.77 20.03 44 IG50_SR3 SilentIntergenicRegion 0 5.47 4.74 12.80 12.10 14.89 12.07 16.01 10.58 7.78 12.31 10.96 14.19 11.57 9.33 2.45 9.78 7.89 6.84 8.02 9.50 3.43 14.92 11.61 45 IG50_AR3 ActiveIntergenicRegion 0 10.54 6.33 14.33 15.85 12.84 13.74 16.93 5.88 11.58 17.03 13.68 13.59 12.00 13.33 6.57 16.70 9.44 14.41 13.35 7.77 8.75 17.17 20.00 46 IG50_AR2 ActiveIntergenicRegion 0 12.36 6.79 25.06 17.82 22.77 17.38 22.32 13.72 17.47 19.94 11.11 21.22 16.06 13.21 8.83 16.11 11.91 9.59 13.96 7.57 5.22 23.28 19.58 47 IG50_SR1 SilentIntergenicRegion 0 9.65 5.92 21.56 15.01 17.36 14.89 12.98 15.23 9.64 16.78 12.80 6.93 4.67 9.64 6.68 14.42 10.36 10.70 17.16 8.34 6.53 16.51 10.24 48 IG50_AR1 ActiveIntergenicRegion 0 20.25 9.39 37.21 23.08 34.32 21.47 23.40 17.40 12.43 22.13 10.01 16.31 19.13 8.76 8.43 14.39 8.93 8.90 10.76 7.90 5.70 17.59 16.53