Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KCTD1 Gene 0 10.58 30.13 47.64 45.15 46.78 90.01 36.40 34.10 38.51 55.68 31.62 22.74 20.89 54.20 39.14 22.67 13.15 83.51 34.19 43.68 31.60 20.28 16.73 2 317932 Transcript 0 0.37 1.76 0.32 2.81 3.18 0.00 2.57 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.48 0.56 1.51 0.00 0.00 0.00 3 408011 Transcript 0 1.82 0.00 1.92 0.10 2.16 0.77 0.54 0.13 2.57 3.92 1.63 0.17 0.36 8.65 5.64 4.71 0.00 4.89 1.19 0.10 16.36 2.38 0.82 4 417602 Transcript 0 2.79 12.25 35.17 34.14 15.88 57.00 30.06 31.56 47.80 49.68 37.80 19.76 22.22 52.79 34.93 29.49 13.60 104.78 38.44 52.24 43.92 14.03 22.22 5 IG48_AR1 ActiveIntergenicRegion 0 1.37 5.40 15.47 4.31 1.47 3.23 6.12 4.46 4.26 2.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.44 2.95 7.82 1.21 0.00 0.00 6 ER1a ExonRegion 0 1.12 3.24 0.97 4.93 1.23 0.00 7.72 0.00 0.00 2.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.45 1.69 4.52 0.00 0.00 0.00 7 E1_Da NovelBoundary 0 3.11 3.35 10.23 9.56 0.00 0.00 28.44 6.78 1.53 14.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.24 19.29 11.70 0.00 0.00 0.00 8 E1a_E4a KnownJunction 0 0.00 0.00 0.00 3.50 8.32 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 0.00 0.46 0.19 0.50 1.55 1.08 0.25 0.39 1.02 3.26 0.33 0.72 9.88 4.98 1.82 0.00 2.98 2.38 0.20 9.48 1.64 1.65 10 E2a_E4a KnownJunction 0 3.63 0.00 3.37 0.00 3.82 0.00 0.00 0.00 4.75 6.82 0.00 0.00 0.00 7.42 6.30 7.60 0.00 6.80 0.00 0.00 23.23 3.12 0.00 11 E3_Aa NovelBoundary 1 0.00 2.76 2.96 0.00 8.40 15.22 16.38 7.31 4.83 4.03 23.80 0.00 0.00 50.68 0.00 52.21 19.82 59.07 53.74 2.75 19.95 0.00 43.11 12 ER3a ExonRegion 0 1.95 8.19 32.76 21.07 9.27 47.16 13.22 24.68 35.94 47.63 48.96 22.57 30.80 76.67 37.71 35.75 22.62 102.99 34.23 48.04 33.28 15.45 18.92 13 E3_Da NovelBoundary 1 0.00 11.64 9.34 1.73 20.37 10.73 14.75 23.58 19.13 12.49 53.96 29.56 19.97 68.46 13.35 27.94 20.94 37.23 7.72 22.37 2.84 2.94 0.00 14 E3a_E4a KnownJunction 0 3.63 16.31 37.58 47.21 22.50 66.84 46.90 38.45 59.66 51.74 26.64 16.96 13.64 28.90 32.14 23.24 4.58 106.58 42.64 56.44 54.55 12.61 25.52 15 I3_AR1 ActiveIntronRegion 1 5.08 18.20 18.77 8.66 16.77 15.90 46.32 16.24 10.05 13.12 26.72 37.05 15.45 36.71 26.57 18.09 12.55 11.03 7.84 23.45 2.05 4.79 2.22 16 I3_SR1 SilentIntronRegion 0 0.50 4.55 1.82 2.56 4.75 3.85 22.44 2.58 4.36 4.24 3.40 9.97 4.19 6.53 2.33 0.79 1.76 4.74 2.63 11.39 0.29 0.56 0.39 17 I3_AR2 ActiveIntronRegion 0 0.60 3.54 3.51 2.64 5.79 5.30 17.03 3.12 6.31 3.68 5.39 10.27 5.20 4.91 1.79 0.65 2.06 6.38 6.03 10.84 0.49 0.46 0.00 18 I3_SR2 SilentIntronRegion 0 1.71 5.62 4.20 9.56 7.76 5.37 18.12 8.12 4.50 5.20 3.85 5.39 4.15 5.61 5.43 2.52 1.85 7.12 4.00 7.51 0.57 0.88 0.56 19 I3_AR4 ActiveIntronRegion 1 7.56 4.94 6.23 9.58 7.72 14.30 26.29 10.07 5.26 7.41 1.99 24.25 0.67 1.11 0.41 2.97 2.74 3.64 2.18 6.99 0.00 0.00 0.00 20 I3_AR9 ActiveIntronRegion 0 2.76 19.21 5.55 4.96 4.61 1.07 10.00 6.63 5.63 8.41 0.00 4.21 0.00 0.00 2.10 0.00 0.00 1.44 3.19 1.60 0.00 0.00 2.94 21 I3_AR10 ActiveIntronRegion 0 3.29 23.08 22.87 25.55 10.51 6.23 21.11 15.53 5.96 12.57 0.00 3.13 7.45 0.97 6.07 1.36 0.00 4.65 4.64 4.76 0.00 0.00 1.08 22 I3_SR6 SilentIntronRegion 0 5.75 13.31 15.43 21.33 9.36 4.14 15.61 7.31 4.11 7.96 0.50 2.09 1.45 0.88 4.29 1.53 0.11 8.36 10.14 4.99 0.92 0.58 0.73 23 I3_AR11 ActiveIntronRegion 0 0.52 6.04 9.24 13.05 6.14 2.28 20.21 4.54 2.54 5.47 1.05 3.19 1.58 0.91 3.08 0.54 0.00 4.46 4.24 7.81 0.00 0.38 0.00 24 I3_AR12 ActiveIntronRegion 0 3.66 6.72 2.41 12.51 5.03 5.11 18.13 3.09 6.36 8.27 0.00 0.00 0.00 0.00 0.88 2.97 0.00 3.70 4.15 2.13 0.00 0.00 0.00 25 E4_Aa NovelBoundary 0 0.00 0.00 10.91 4.13 3.48 4.77 27.34 2.46 4.46 0.00 0.00 0.00 6.82 2.47 0.00 0.00 0.00 4.19 7.53 0.00 0.00 2.57 0.00 26 ER4a ExonRegion 0 5.82 47.42 60.99 74.27 69.63 164.90 46.66 52.08 68.37 87.68 30.38 20.95 20.04 61.16 44.28 20.04 10.86 164.41 53.07 64.86 76.82 31.24 22.44 27 E4a_E5a KnownJunction 0 34.01 83.74 94.26 93.00 75.04 265.87 77.77 83.79 78.15 116.26 21.48 39.76 19.48 56.86 73.31 20.08 4.77 135.06 62.87 67.88 67.28 23.39 31.93 28 I4_AR2 ActiveIntronRegion 0 0.00 6.10 5.31 8.18 2.68 0.00 17.21 1.73 0.00 3.44 2.26 4.33 4.69 3.25 4.84 2.97 0.00 5.54 12.74 6.03 0.00 0.00 0.00 29 ER5a ExonRegion 0 12.47 58.79 80.99 95.67 109.76 208.33 85.25 69.27 83.40 106.86 39.02 44.73 27.62 59.43 61.81 27.10 12.63 134.34 54.61 80.72 44.36 39.40 26.41 30 E5a_E6a KnownJunction 0 37.56 69.00 93.96 97.16 170.54 335.26 120.56 89.42 103.62 102.45 50.12 54.92 26.78 102.30 95.31 16.83 12.62 136.55 80.85 100.73 37.62 52.54 26.55 31 ER6a ExonRegion 1 29.49 71.82 108.75 111.51 115.08 229.52 85.77 62.13 72.44 103.63 32.75 49.89 28.12 65.97 81.35 23.69 8.79 190.23 57.62 88.80 65.82 30.88 36.40 32 E6a_E7a KnownJunction 0 10.89 76.30 164.19 152.03 55.69 216.18 84.35 74.22 71.70 109.95 34.43 51.77 26.30 80.52 96.79 19.48 4.58 118.43 88.66 74.21 44.05 47.95 7.94 33 E7_Aa NovelBoundary 0 0.00 15.66 7.24 10.89 3.99 9.88 15.55 9.28 5.12 0.00 0.00 0.00 0.00 4.94 4.45 0.00 0.00 10.78 23.15 0.00 0.00 0.00 3.93 34 ER7a ExonRegion 0 27.87 69.32 79.30 84.80 110.96 152.07 76.84 56.31 45.58 77.73 17.47 26.39 12.89 37.25 47.19 12.02 6.22 44.77 41.23 40.37 23.22 33.34 14.18 35 ER7b ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00