Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 B4GALT6 Gene 0 6.79 33.72 41.24 34.79 54.06 65.38 47.38 31.05 36.21 26.54 104.46 108.26 164.01 131.73 72.59 41.47 190.76 7.88 11.44 31.56 20.61 35.56 18.20 2 306851 Transcript 0 5.24 21.45 33.35 26.53 39.67 41.35 30.37 22.18 21.46 17.96 44.46 63.12 102.65 74.83 60.70 19.72 69.13 2.09 8.41 15.51 6.76 23.10 6.70 3 237019 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.26 0.00 8.28 2.47 0.00 3.76 18.33 0.00 0.00 0.00 0.00 0.00 0.00 4 383131 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 6.76 0.00 3.59 0.00 4.74 0.00 6.49 10.07 0.00 3.33 3.65 0.00 0.00 0.00 2.66 0.00 4.35 5 IG14 Intergenic 0 0.00 0.00 0.54 0.00 0.00 1.21 0.19 0.57 1.21 1.38 10.91 1.57 3.04 11.37 3.65 4.57 27.13 1.55 2.11 1.40 5.81 0.15 1.08 6 IG14_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.46 0.00 0.00 1.35 0.22 0.65 1.21 1.39 9.73 0.91 3.18 11.34 4.02 4.29 25.72 1.58 2.40 1.43 5.28 0.18 1.25 7 IG14_SR1 SilentIntergenicRegion 0 0.00 0.00 1.00 0.00 0.00 0.34 0.00 0.00 1.25 1.29 18.73 5.87 2.17 11.67 1.28 6.46 36.52 1.35 0.21 1.24 9.29 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.12 4.04 12.24 38.37 13.18 6.95 22.21 0.00 8.69 2.85 6.65 2.47 1.69 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.48 5.85 0.00 46.38 8.90 10.85 35.44 0.00 12.33 5.43 13.78 3.00 4.18 10 ER1b ExonRegion 1 0.61 3.23 4.84 3.32 5.65 9.79 7.89 3.97 8.42 8.49 58.19 10.22 23.18 108.32 20.29 27.03 174.69 5.95 6.05 15.16 33.09 9.88 12.50 11 E1a_E2a KnownJunction 1 0.00 0.00 9.08 4.73 8.32 21.01 20.27 2.38 22.37 14.48 85.97 5.85 55.52 164.17 44.38 64.51 273.02 5.72 24.85 23.91 50.97 36.86 35.51 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.26 0.00 8.28 2.47 0.00 3.76 18.33 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 6.90 0.00 0.00 5.12 0.00 0.00 0.00 0.00 0.00 0.00 9.45 5.08 0.00 14 ER2a ExonRegion 1 0.92 7.32 7.66 14.84 15.32 30.31 25.73 12.65 26.92 16.64 156.86 48.51 113.72 165.90 16.14 50.25 360.00 10.31 15.46 30.95 42.81 27.74 30.67 15 E2_Da NovelBoundary 0 0.00 0.00 14.25 13.02 8.57 7.44 18.64 0.00 7.96 5.53 15.32 18.46 12.99 2.24 0.00 0.00 33.66 0.00 8.28 20.96 0.00 0.00 0.00 16 E2a_E3a KnownJunction 1 0.00 11.97 11.12 3.50 31.66 14.82 10.11 11.42 28.21 12.01 143.04 42.61 148.20 177.59 40.30 43.15 281.07 15.59 16.66 20.07 39.91 34.47 24.84 17 E2a_E4a NovelJunction 0 0.00 0.00 2.31 0.00 0.00 0.00 0.00 0.00 1.68 0.00 7.42 6.30 6.82 31.90 0.00 3.50 21.13 2.57 0.00 0.00 0.00 0.00 4.18 18 I2_AR4 ActiveIntronRegion 0 0.61 4.45 5.62 4.59 5.26 9.44 16.82 3.18 4.90 2.31 5.60 6.21 21.76 5.21 4.11 3.88 22.55 1.20 3.63 10.01 0.21 1.20 3.17 19 I2_SR5 SilentIntronRegion 0 2.71 6.99 20.13 7.69 8.49 9.06 9.99 11.68 7.31 6.07 9.73 5.90 13.43 6.84 5.20 5.52 26.44 9.89 9.31 9.45 2.89 1.06 0.95 20 E3_Aa NovelBoundary 0 3.19 23.48 1.83 6.46 12.14 23.05 28.71 14.09 10.30 4.57 12.00 5.70 0.00 16.83 0.00 12.22 37.12 0.00 14.40 12.91 3.15 0.00 0.00 21 ER3a ExonRegion 1 5.12 22.41 13.78 15.19 22.63 56.16 42.38 21.27 36.28 28.54 187.86 77.40 191.30 214.31 46.24 90.36 433.43 19.21 20.73 37.98 52.25 36.17 46.11 22 E3a_E4a KnownJunction 1 3.78 24.80 11.06 14.88 4.16 56.27 26.63 19.84 24.57 19.99 181.20 114.19 180.83 183.41 18.17 49.39 382.33 13.93 26.92 38.61 45.90 22.04 19.12 23 E3a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.14 1.79 0.00 8.90 0.00 0.00 9.71 0.00 3.85 12.62 0.00 0.00 0.00 0.00 2.63 4.27 24 ER4a ExonRegion 1 1.66 20.37 14.37 11.97 20.44 49.42 27.35 14.68 25.90 16.57 159.32 116.17 179.87 195.01 34.12 67.74 387.74 19.28 25.71 43.98 60.59 28.77 30.64 25 E4a_E5a KnownJunction 1 3.26 16.77 14.75 7.06 35.31 52.24 26.81 17.74 24.91 14.40 99.03 134.89 214.11 243.86 28.80 85.70 416.36 8.21 8.38 37.14 53.00 60.01 46.61 26 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 6.76 0.00 3.59 0.00 4.74 0.00 6.49 10.07 0.00 3.33 3.65 0.00 0.00 0.00 2.66 0.00 4.35 27 ER5a ExonRegion 1 3.38 26.61 8.86 8.61 24.26 41.28 29.67 22.56 27.69 10.42 135.15 164.37 170.48 222.77 31.86 77.28 360.00 19.36 20.42 30.68 78.26 32.27 38.33 28 E5a_E6a KnownJunction 1 0.00 30.65 14.43 10.26 18.85 40.15 38.07 14.99 30.44 12.01 112.24 104.58 228.88 222.97 35.60 74.94 378.59 20.19 30.21 42.12 70.06 23.94 16.39 29 I5_AR2 ActiveIntronRegion 0 0.00 26.44 0.00 0.00 0.00 7.34 14.56 0.00 0.00 0.00 5.80 0.00 0.00 0.00 11.61 5.94 23.11 0.00 0.00 0.00 0.00 0.00 0.00 30 I5_SR3 SilentIntronRegion 0 0.00 28.85 0.00 0.00 5.05 3.39 6.10 0.00 0.00 0.00 3.61 0.00 0.00 4.96 4.54 5.61 12.27 0.00 3.07 0.00 0.00 0.00 0.00 31 E6_Aa NovelBoundary 0 2.74 33.61 18.12 9.46 13.58 8.69 22.26 12.16 3.91 10.18 2.42 0.00 6.82 4.89 19.66 8.29 24.68 6.05 0.00 11.82 0.00 3.12 0.00 32 ER6a ExonRegion 1 3.24 40.37 35.41 19.22 30.47 52.09 33.77 25.38 35.00 11.58 140.05 109.43 126.81 214.93 43.55 64.50 303.95 16.47 25.57 43.75 50.86 29.44 30.76 33 E6_Da NovelBoundary 0 6.22 25.06 24.98 10.02 28.69 5.11 4.33 7.48 7.61 7.79 16.79 0.00 6.82 0.00 20.64 11.62 13.65 4.68 3.76 6.39 6.24 0.00 0.00 34 E6a_E7a KnownJunction 1 3.63 21.51 9.11 19.15 72.16 55.25 61.30 13.68 35.82 4.11 136.09 154.70 198.69 212.90 23.73 42.04 250.30 10.20 12.14 35.09 20.57 30.68 30.39 35 ER7a ExonRegion 1 3.56 26.34 11.93 24.79 28.02 39.18 43.56 17.00 29.83 13.64 138.65 103.98 150.77 174.92 33.49 55.70 278.94 4.64 20.46 49.97 22.00 36.52 24.16 36 E7_Da NovelBoundary 0 0.00 5.26 0.00 0.00 4.33 0.00 12.76 4.64 0.00 1.42 14.48 0.00 13.64 0.00 4.45 22.64 8.60 0.00 0.00 2.49 0.00 2.63 3.84 37 E7a_E8a KnownJunction 1 3.41 41.83 21.70 29.67 24.53 51.79 13.12 18.89 37.04 11.90 179.52 73.97 147.88 132.09 40.79 32.47 394.58 2.20 50.26 54.27 29.65 39.37 30.13 38 ER8a ExonRegion 0 3.63 29.79 15.31 24.44 33.55 26.93 24.01 19.91 37.38 20.37 179.30 111.76 144.98 129.10 37.49 37.59 346.01 7.37 15.08 45.22 25.69 24.74 18.45 39 E8a_E9a KnownJunction 0 2.82 32.23 22.71 29.37 32.60 60.65 14.79 31.22 46.73 20.71 144.30 110.14 168.17 109.13 38.32 48.71 290.51 7.30 0.00 48.77 12.11 24.68 18.87 40 ER9a ExonRegion 0 4.01 31.32 18.55 20.63 39.85 66.39 45.04 21.28 36.13 21.32 140.65 117.27 162.93 141.52 43.80 49.87 242.94 12.09 12.91 38.55 25.56 31.38 24.66 41 E9_Da KnownBoundary 1 10.30 27.82 23.00 33.60 67.15 78.19 60.99 17.66 25.12 24.95 75.60 137.44 400.30 149.63 25.09 6.92 151.38 4.39 4.14 14.76 2.29 34.29 7.85 42 ER9b ExonRegion 0 10.48 42.91 66.64 53.06 79.34 82.69 60.74 44.37 42.92 35.92 78.80 122.21 193.06 111.29 108.22 32.48 116.06 4.18 8.12 28.17 6.87 43.73 11.71