Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RBBP8 Gene 0 44.39 123.84 180.07 67.71 76.38 133.71 134.72 61.58 28.96 87.31 277.75 299.38 269.56 212.79 126.97 143.69 162.08 81.56 93.65 107.39 15.59 60.22 30.67 2 327155 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 360790 Transcript 0 3.90 8.13 11.83 3.45 6.44 9.00 10.51 2.59 0.93 4.01 14.71 6.49 9.23 9.29 8.98 4.27 8.56 2.74 4.08 5.32 0.28 1.37 0.73 4 327174 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 399722 Transcript 0 0.00 12.37 16.23 11.42 6.62 9.94 2.25 9.98 3.30 11.68 86.34 24.61 39.45 43.68 13.47 19.91 30.01 50.20 17.22 39.63 0.00 0.00 0.00 6 399725 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 399721 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 2.79 13.08 9.62 1.58 4.16 8.16 14.38 4.49 1.88 12.72 32.24 6.85 10.19 29.72 8.37 19.68 34.36 14.30 9.76 20.45 5.42 11.52 16.85 10 E1a_E3a KnownJunction 1 0.00 5.59 22.62 5.23 0.00 2.44 5.26 12.53 9.64 27.26 43.64 13.80 69.48 70.87 16.07 42.04 56.85 32.17 12.80 71.59 5.19 32.21 46.61 11 E2_Ab NovelBoundary 1 3.78 118.86 12.80 4.66 28.01 67.63 37.36 6.37 6.22 14.42 142.77 0.00 5.84 70.87 42.28 85.45 67.98 56.83 27.29 53.82 2.35 0.00 0.00 12 ER2a ExonRegion 1 0.00 47.60 4.67 1.11 9.32 27.37 16.87 2.75 1.01 6.24 56.34 0.00 0.00 35.37 13.22 37.32 31.54 29.77 10.85 23.01 0.65 0.00 0.00 13 ER2b ExonRegion 1 1.84 42.90 17.52 6.12 5.53 14.88 14.22 8.51 3.64 18.03 114.00 20.69 18.95 34.48 20.05 32.20 59.73 40.33 28.78 41.32 1.18 0.60 0.00 14 E2_Da KnownBoundary 0 0.00 18.09 16.91 9.39 4.07 0.00 7.55 9.41 7.73 20.71 90.60 12.90 0.00 62.16 31.52 68.87 44.69 33.25 20.24 31.70 0.00 0.00 0.00 15 E2a_E3a KnownJunction 0 0.00 12.37 16.23 11.42 6.62 9.94 2.25 9.98 3.30 11.68 86.34 24.61 39.45 43.68 13.47 19.91 30.01 50.20 17.22 39.63 0.00 0.00 0.00 16 ER2c ExonRegion 1 0.44 17.72 19.65 8.43 5.05 9.96 7.65 8.96 6.76 18.55 61.26 34.80 20.27 48.92 23.53 62.74 23.60 26.92 31.26 31.52 1.39 1.72 0.00 17 E2b_E3a KnownJunction 1 3.56 3.35 20.52 3.73 11.12 18.28 5.87 10.60 9.55 11.07 84.34 61.37 40.42 51.80 9.27 23.84 21.51 13.85 0.00 20.07 0.00 2.69 0.00 18 ER3a ExonRegion 0 17.70 98.47 86.62 34.63 32.55 87.23 87.22 43.94 27.67 72.22 308.78 262.17 327.46 184.36 68.90 131.36 171.84 90.16 72.48 131.36 11.66 55.50 41.75 19 E3a_E4a KnownJunction 0 41.41 143.99 87.96 38.22 49.24 85.75 102.59 49.41 34.03 88.56 451.54 485.56 784.85 216.14 97.29 134.32 254.89 61.31 90.07 148.93 20.82 67.11 36.88 20 ER4a ExonRegion 0 25.40 132.84 99.57 45.58 41.63 77.87 72.39 49.44 34.99 100.58 361.63 527.39 530.08 326.94 125.70 158.97 288.25 75.89 90.97 161.65 20.91 86.97 22.88 21 E4a_E5a KnownJunction 0 37.41 139.12 96.92 52.41 32.77 74.96 59.00 45.55 31.71 97.27 313.82 561.03 481.62 372.18 125.10 252.41 257.69 68.94 120.38 211.89 17.73 114.02 19.46 22 ER5a ExonRegion 1 13.07 79.78 95.45 43.64 45.93 99.98 125.11 55.96 32.61 103.71 383.32 548.26 489.72 266.93 72.23 193.78 284.67 73.60 96.85 172.30 14.74 75.35 35.58 23 E5a_E6a KnownJunction 0 22.15 55.45 89.74 34.59 70.12 155.59 141.19 42.92 24.04 108.17 426.42 681.67 553.05 159.10 49.82 182.77 270.13 71.80 71.34 140.04 25.88 76.24 50.96 24 ER6a ExonRegion 1 17.49 61.28 105.36 38.67 53.42 111.15 116.65 38.73 29.64 105.60 450.66 836.62 872.93 366.27 102.65 312.23 285.98 144.66 140.07 161.65 26.58 96.23 50.73 25 E6a_E7a KnownJunction 1 16.23 91.76 132.79 40.89 23.43 65.47 137.13 50.52 18.03 99.50 581.31 795.41 674.79 471.60 132.52 332.90 241.42 143.72 178.17 153.91 40.83 129.63 62.23 26 E7_Aa NovelBoundary 0 0.00 14.14 10.56 11.59 22.92 39.52 40.06 18.24 9.87 20.04 0.00 0.00 28.73 5.42 0.00 0.00 0.00 0.00 0.00 5.37 0.00 0.00 0.00 27 ER7a ExonRegion 1 12.38 90.39 109.13 33.38 72.33 143.56 144.35 52.81 27.17 101.51 536.45 649.74 572.95 389.76 90.46 220.56 336.30 114.28 144.91 134.99 46.38 87.13 48.30 28 E7a_E8a KnownJunction 1 29.26 106.17 112.59 39.46 81.41 177.45 151.17 65.68 39.18 103.63 402.42 626.75 594.77 344.46 94.81 210.63 330.06 128.51 119.25 131.54 43.18 71.21 55.83 29 ER8a ExonRegion 1 30.16 129.96 125.17 55.51 77.09 164.99 166.18 66.94 41.05 117.88 459.21 598.84 653.54 361.02 102.50 273.64 289.80 174.61 150.42 152.49 40.29 93.91 61.82 30 E8a_E9a KnownJunction 1 21.86 98.86 138.40 52.44 80.65 166.10 183.36 53.31 48.58 98.37 498.23 680.02 623.99 359.06 103.71 263.86 244.69 186.66 151.72 142.41 47.75 97.97 83.23 31 ER9a ExonRegion 0 30.92 80.94 137.21 62.61 93.70 157.95 153.60 62.44 42.06 109.70 443.63 513.56 491.38 349.28 135.17 274.43 223.27 170.71 141.01 145.71 28.00 78.98 57.45 32 E9a_E10a KnownJunction 0 34.82 134.38 140.59 56.00 80.98 219.93 180.45 56.44 43.14 118.51 440.95 384.43 511.01 379.25 118.43 262.58 288.64 160.88 164.80 166.12 51.03 67.42 68.63 33 ER10a ExonRegion 0 25.81 115.00 133.05 56.43 84.91 166.37 168.68 53.72 30.37 89.31 414.27 386.47 389.32 267.81 91.98 195.74 232.11 135.70 97.25 121.49 32.11 72.50 37.43 34 E10a_E11a KnownJunction 0 30.01 212.33 153.42 69.55 112.14 213.40 224.70 62.47 25.06 91.98 460.01 542.28 487.31 350.93 173.68 323.16 325.29 184.88 140.33 126.88 30.95 126.14 74.01 35 ER11a ExonRegion 0 27.98 142.82 136.82 67.02 79.37 111.78 115.24 55.80 36.08 108.02 370.60 442.53 355.28 310.98 123.68 231.01 231.82 128.56 132.18 131.44 25.63 86.24 48.47 36 E11a_E12a KnownJunction 0 48.08 185.43 155.64 71.82 109.08 134.75 153.02 65.84 41.72 107.88 392.78 477.76 345.27 308.50 108.54 144.83 240.30 47.01 85.27 108.53 17.17 109.67 40.38 37 ER12a ExonRegion 0 54.50 194.34 189.18 85.11 111.19 193.94 197.24 72.12 35.64 100.14 303.46 341.45 280.66 249.30 131.85 163.50 178.19 101.87 113.57 108.36 15.42 77.03 35.10 38 E12a_E13a KnownJunction 0 105.13 166.94 323.29 105.55 125.64 185.63 296.07 83.87 30.44 102.18 293.13 190.41 171.90 206.90 192.10 161.15 127.44 81.79 93.27 133.59 16.80 64.23 35.60 39 ER13a ExonRegion 0 75.31 150.92 292.10 106.86 137.31 198.51 181.42 89.24 37.74 99.61 323.19 244.77 244.47 234.95 161.90 110.81 172.48 63.35 95.69 138.33 15.65 71.77 26.80 40 E13a_E14a KnownJunction 0 151.43 181.68 358.62 154.26 168.51 248.61 132.31 114.51 44.56 99.50 370.51 336.56 360.53 335.45 259.47 83.14 165.03 51.07 82.26 174.94 11.18 78.44 31.58 41 ER14a ExonRegion 0 82.02 139.36 269.69 125.97 112.02 194.94 193.36 92.31 41.30 96.62 295.43 314.20 280.56 256.90 208.86 109.87 147.13 41.67 98.75 131.53 16.02 70.14 17.06 42 E14a_E15a KnownJunction 0 119.43 147.28 240.17 120.16 108.91 219.36 239.01 93.61 43.52 83.38 206.37 345.86 261.51 139.27 209.41 81.52 102.10 25.37 70.40 159.09 5.68 48.68 11.35 43 ER15a ExonRegion 0 91.03 161.66 260.49 114.30 86.39 199.64 230.04 75.01 34.15 95.45 268.27 261.05 220.68 236.09 214.24 91.72 141.28 42.55 86.03 136.35 8.91 47.54 20.94 44 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 0.00 45 E15a_E16b KnownJunction 0 98.68 238.64 356.08 123.09 117.66 266.89 270.67 80.55 33.88 147.18 357.25 175.11 287.64 269.53 277.77 106.13 197.48 48.83 92.43 160.94 9.27 34.29 11.78 46 ER16a ExonRegion 0 7.80 16.27 23.66 6.90 12.88 17.99 21.02 5.19 1.85 8.03 26.94 12.99 18.47 18.58 17.95 8.54 17.12 3.70 8.16 10.64 0.55 2.73 1.47 47 ER16b ExonRegion 0 94.46 187.84 337.47 114.19 111.00 201.33 183.90 72.47 35.53 109.62 274.28 263.89 215.25 199.27 227.39 143.20 160.64 60.36 115.36 131.22 15.24 39.15 31.50 48 E16a_E17a KnownJunction 0 119.35 130.11 364.92 133.82 99.07 109.14 138.85 66.79 28.79 110.51 252.22 268.89 121.91 136.68 198.90 154.49 185.32 45.18 76.80 114.86 23.54 48.74 32.52 49 E16a_E18a NovelJunction 0 10.74 15.46 86.60 21.24 24.45 27.14 18.02 31.54 8.36 18.67 37.43 37.06 32.63 14.89 8.90 8.03 25.53 12.39 8.47 8.12 0.00 14.39 0.00 50 ER17a ExonRegion 0 96.94 119.63 406.98 122.48 83.98 140.44 172.00 77.14 29.98 98.55 224.19 318.77 216.34 201.23 247.52 163.89 159.10 71.82 103.66 128.60 17.28 55.69 42.87 51 E17a_E18a KnownJunction 0 65.12 88.21 505.01 103.88 73.51 189.10 137.74 102.23 36.02 106.08 255.06 405.73 249.17 179.35 275.91 201.83 116.60 80.50 164.90 86.42 17.61 58.42 24.16 52 E17a_E19a KnownJunction 0 3.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.95 0.00 0.00 6.01 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.16 53 ER18a ExonRegion 0 89.53 124.47 353.88 93.49 123.83 190.45 168.76 73.43 30.05 97.57 265.88 237.41 173.29 213.38 216.13 149.99 128.19 79.64 118.06 104.91 21.15 52.13 33.00 54 E18a_E19a KnownJunction 0 61.20 130.50 407.44 133.38 98.73 213.40 192.90 98.95 35.68 103.15 214.00 285.09 149.83 223.15 269.86 180.98 99.86 89.25 111.34 119.65 8.77 50.46 28.34 55 E18a_E20a NovelJunction 0 3.56 0.00 4.67 3.03 0.00 0.00 7.51 0.00 0.00 9.94 9.69 0.00 0.00 0.00 13.35 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 56 E19_Aa NovelBoundary 0 3.33 8.42 19.99 21.28 19.69 16.07 22.88 2.55 4.57 9.97 7.05 6.30 0.00 7.77 0.00 3.93 0.00 3.98 9.04 2.94 0.00 2.33 0.00 57 ER19a ExonRegion 1 88.27 182.84 421.64 122.38 93.03 142.17 132.30 109.82 36.15 114.62 299.94 221.66 90.37 224.69 242.95 155.03 160.54 78.11 125.37 127.81 17.07 66.29 30.21 58 E19a_E20a KnownJunction 1 96.76 151.49 336.15 111.91 59.17 81.94 109.35 98.87 29.14 106.67 216.63 141.50 51.30 214.32 304.72 47.08 118.19 53.23 77.27 108.02 11.74 63.25 12.29 59 ER20a ExonRegion 0 49.94 78.90 264.63 74.14 65.39 82.69 80.14 92.04 24.18 97.41 156.77 114.63 85.86 112.26 175.59 69.17 73.11 25.39 58.44 70.47 3.37 52.82 11.75 60 ER20b ExonRegion 0 11.11 13.22 17.77 5.45 0.00 7.79 10.92 11.67 0.00 4.87 3.38 2.16 1.17 3.25 3.63 1.49 0.00 0.00 1.59 1.06 0.00 2.08 0.00 61 IG26_AR3 ActiveIntergenicRegion 0 0.26 9.05 24.04 6.27 3.65 0.00 1.63 3.57 3.13 7.57 6.00 4.21 4.30 5.31 4.09 7.61 13.60 5.96 4.20 5.91 2.18 3.45 4.97 62 IG26_SR4 SilentIntergenicRegion 0 2.24 10.62 21.91 7.08 3.06 3.22 2.29 1.21 2.52 4.56 4.27 6.17 3.22 8.70 4.06 3.13 9.21 9.62 7.04 3.42 3.73 5.65 2.97