Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LPIN2 Gene 0 69.41 86.77 67.61 28.45 46.36 75.70 28.05 36.46 35.08 33.84 110.23 119.40 106.56 167.57 83.67 94.66 62.96 67.30 44.87 24.80 119.94 134.78 104.89 2 455369 Transcript 0 3.72 10.68 5.13 1.82 8.94 19.40 8.62 2.29 2.84 3.70 24.69 3.30 0.43 18.92 5.63 17.28 6.10 14.89 7.95 2.61 39.95 21.87 35.90 3 261596 Transcript 0 29.39 65.04 41.05 18.76 30.75 76.51 24.06 29.11 34.69 28.80 124.97 160.27 167.82 202.98 60.17 110.24 76.57 81.78 56.85 25.67 153.65 144.45 119.53 4 455221 Transcript 1 10.44 0.50 0.68 0.25 6.20 2.67 3.57 2.69 5.47 0.63 9.39 55.33 40.62 34.25 14.16 8.54 2.86 0.00 0.00 0.53 0.27 0.26 1.82 5 ER1a ExonRegion 0 0.84 2.62 1.22 0.24 1.25 8.64 2.76 0.48 1.02 1.01 9.17 0.30 0.86 8.11 2.37 7.14 4.92 6.40 2.35 2.22 11.94 6.27 9.91 6 E1a_E4a KnownJunction 0 6.59 18.75 9.05 3.40 16.64 30.15 14.49 4.11 4.66 6.39 40.22 6.30 0.00 29.73 8.90 27.43 7.29 23.38 13.55 3.00 67.96 37.47 61.89 7 ER2a ExonRegion 0 0.47 1.35 6.80 0.90 0.00 0.01 0.86 0.02 0.82 1.96 0.97 8.09 4.47 3.65 2.75 5.93 5.12 5.06 3.53 3.18 3.90 3.60 5.87 8 E2a_E4a KnownJunction 0 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 0.00 3.22 2.32 6.30 0.00 4.65 0.00 0.00 0.00 8.95 0.00 2.49 0.00 2.57 0.00 9 I2_AR4 ActiveIntronRegion 0 4.58 8.87 15.55 4.18 2.02 1.29 3.35 2.05 1.78 3.43 1.15 8.46 18.31 1.06 2.17 10.83 5.49 4.92 3.25 5.63 3.16 5.02 8.32 10 ER3a ExonRegion 1 17.91 1.01 1.36 0.50 8.40 2.56 5.15 1.40 4.95 1.25 8.58 38.48 27.50 25.06 11.39 5.80 5.72 0.00 0.00 1.06 0.55 0.52 3.64 11 E3a_E4a KnownJunction 1 2.96 0.00 0.00 0.00 3.99 2.78 1.99 3.98 5.99 0.00 10.21 72.17 53.73 43.44 16.94 11.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 19.02 16.10 15.20 6.16 19.62 22.11 11.21 16.22 27.25 18.61 92.55 85.79 74.39 132.95 43.87 65.59 45.75 45.12 26.93 22.55 98.91 75.07 71.68 13 E4a_E5a KnownJunction 0 18.30 6.64 15.05 12.52 4.16 27.26 21.73 7.85 36.63 21.60 115.50 157.85 134.89 201.78 88.02 79.89 76.48 32.91 51.95 30.68 103.48 130.18 113.87 14 ER5a ExonRegion 1 17.71 24.19 22.93 11.02 26.34 45.21 16.68 13.68 39.36 25.93 110.20 159.62 197.15 188.88 58.23 92.03 64.45 43.16 43.53 21.86 102.45 120.17 98.34 15 E5_Da NovelBoundary 0 16.15 19.34 26.29 9.72 6.96 33.56 12.81 8.75 34.69 21.52 73.97 112.39 165.09 95.47 19.28 23.75 48.06 49.58 8.28 7.54 78.02 47.52 58.30 16 E5b_E6a KnownJunction 0 60.97 36.05 35.16 15.05 51.02 141.85 38.55 23.08 57.87 37.50 207.89 175.41 293.65 312.62 125.10 168.50 103.51 57.33 67.20 58.68 148.27 178.19 211.70 17 ER5b ExonRegion 0 35.28 30.00 33.09 12.38 37.46 102.85 25.27 22.76 48.07 30.20 185.72 180.39 305.24 280.84 99.13 114.67 92.98 62.36 49.37 40.25 144.34 142.72 170.08 18 ER6a ExonRegion 1 22.03 39.69 26.46 12.04 32.33 50.45 21.40 26.64 29.94 28.08 116.43 243.81 192.80 220.70 61.76 83.41 84.47 55.87 59.55 31.69 116.56 138.64 98.63 19 E6a_E7a KnownJunction 1 18.97 39.73 13.45 5.53 19.27 48.55 21.60 27.31 25.98 15.20 87.18 341.51 179.53 186.18 48.58 68.53 81.07 65.50 48.57 14.64 111.45 91.67 48.40 20 ER7a ExonRegion 1 26.04 46.53 32.77 14.07 23.19 57.15 22.99 29.59 39.56 24.75 156.51 271.95 161.42 256.04 57.89 105.37 100.89 108.68 71.38 39.89 177.48 164.75 132.80 21 E7a_E8a KnownJunction 0 35.56 54.53 26.49 16.91 17.83 52.47 9.80 42.39 27.86 22.64 125.61 138.80 162.81 262.82 79.24 112.28 89.76 99.20 61.93 69.35 122.75 170.35 112.42 22 ER8a ExonRegion 0 19.00 61.17 31.82 11.56 26.11 48.09 18.51 24.64 37.47 24.03 134.84 239.03 159.39 164.30 45.86 97.91 88.03 90.94 44.72 32.82 158.67 122.39 94.16 23 E8a_E9a KnownJunction 1 22.15 75.71 53.58 21.54 44.31 64.79 33.30 37.79 48.81 41.66 111.98 265.44 155.67 198.19 87.89 120.57 103.51 91.07 89.41 30.42 122.38 116.83 174.82 24 ER9a ExonRegion 0 26.02 53.11 41.28 19.39 26.51 71.36 26.74 26.05 39.48 28.35 134.45 161.83 165.05 232.13 59.42 129.92 93.87 97.33 51.45 34.47 168.30 157.69 131.90 25 E9a_E10a KnownJunction 0 34.45 111.23 28.65 15.58 47.96 141.96 34.49 27.72 35.50 25.12 134.61 213.22 195.77 291.90 84.68 107.24 83.22 100.61 27.67 5.62 169.83 127.98 161.08 26 E10_Aa NovelBoundary 0 2.74 0.00 0.00 0.00 20.12 5.79 8.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 27 ER10a ExonRegion 1 13.65 59.34 28.01 16.95 29.38 79.61 28.96 25.20 36.55 32.98 125.27 202.58 222.21 257.41 65.66 118.47 65.06 92.35 62.34 24.11 165.43 159.97 150.59 28 E10a_E11a KnownJunction 1 24.00 83.01 37.58 17.18 15.96 93.53 17.31 28.92 36.57 25.57 141.83 149.00 228.88 230.21 37.46 104.33 57.41 107.03 60.80 39.31 180.27 128.71 118.83 29 ER11a ExonRegion 1 21.71 56.62 28.19 17.34 22.37 58.81 18.27 22.28 29.20 23.52 96.94 145.59 177.15 202.74 48.23 78.79 53.39 72.70 44.88 21.29 136.54 142.50 117.50 30 E11a_E12a KnownJunction 0 53.94 115.57 47.51 35.06 41.94 117.72 30.87 42.31 45.89 30.06 152.41 174.21 255.02 278.06 72.32 142.01 129.97 56.13 87.81 26.40 148.08 204.58 106.36 31 ER12a ExonRegion 1 43.79 82.10 36.70 24.79 48.79 125.73 33.80 37.16 39.96 19.46 137.89 184.00 260.90 229.45 62.47 99.50 68.62 63.30 42.83 28.23 130.56 191.28 131.02 32 E12_Da NovelBoundary 0 0.00 15.79 6.65 1.27 0.00 4.66 10.16 18.28 0.00 1.07 0.00 23.26 31.98 14.24 4.45 0.00 0.00 4.39 8.94 3.07 6.12 11.45 4.10 33 E12a_E13a KnownJunction 1 21.04 52.23 34.09 11.95 40.24 90.74 12.41 25.71 20.14 20.33 85.86 224.02 221.09 160.99 61.81 80.15 52.27 44.36 55.06 28.06 108.17 150.51 117.80 34 E12a_E14a NovelJunction 0 0.00 6.05 7.78 1.96 7.89 2.90 1.68 0.00 2.75 6.42 7.42 20.11 28.73 13.36 0.00 15.47 8.23 1.62 4.80 0.00 7.72 8.21 16.90 35 ER13a ExonRegion 0 20.47 54.91 24.52 16.57 19.99 57.69 19.41 25.98 19.41 22.84 117.74 198.35 197.05 152.71 45.38 76.30 88.56 65.44 47.37 28.91 126.62 116.14 87.18 36 E13a_E14a KnownJunction 1 20.67 66.57 25.49 18.28 15.53 65.76 30.25 26.21 26.27 25.36 106.08 140.75 183.59 148.21 19.90 103.56 58.25 88.34 51.39 28.89 121.21 109.73 114.73 37 I13_SR1 SilentIntronRegion 0 4.06 4.01 4.33 0.62 5.42 3.25 8.54 0.83 4.77 4.36 5.48 16.30 28.46 9.89 5.97 2.11 3.81 1.60 0.61 2.46 6.76 14.60 8.77 38 E14_Aa NovelBoundary 0 0.00 6.71 8.49 0.00 3.74 13.57 11.04 3.78 1.19 7.09 13.06 5.70 14.28 4.94 0.00 0.00 8.13 13.89 17.22 3.26 20.14 14.39 19.29 39 ER14a ExonRegion 0 23.66 47.92 37.66 17.58 19.30 69.09 22.27 44.50 36.12 27.69 159.01 193.53 231.58 237.07 64.38 144.64 90.99 99.78 81.86 33.71 181.61 220.16 174.44 40 E14a_E15a KnownJunction 1 16.60 45.45 50.32 18.58 22.33 75.52 25.35 43.05 28.50 38.68 216.58 258.38 302.90 292.31 59.71 135.26 141.37 71.76 88.00 52.41 242.72 150.14 170.81 41 ER15a ExonRegion 0 12.34 32.64 38.40 8.59 11.93 46.80 14.09 19.30 21.85 30.65 123.94 185.70 193.31 220.16 69.98 79.93 104.36 67.05 53.19 20.92 180.39 115.82 86.86 42 E15a_E16a KnownJunction 1 13.93 24.60 40.77 4.73 12.90 51.62 8.39 15.16 32.41 19.31 81.70 100.98 130.02 204.02 43.27 67.16 115.94 70.47 21.08 16.17 142.21 72.93 86.73 43 ER16a ExonRegion 0 42.75 51.99 56.80 11.81 38.35 77.96 22.94 37.22 39.50 34.32 152.49 155.98 173.85 249.76 68.13 143.56 106.43 130.36 89.78 28.98 225.43 194.84 160.36 44 E16a_E17a KnownJunction 0 34.30 107.81 58.34 19.74 37.78 147.93 26.90 30.72 53.04 41.39 120.77 223.12 225.31 285.66 128.69 141.84 110.14 109.31 75.11 15.92 316.05 215.60 136.32 45 ER17a ExonRegion 0 32.13 56.39 56.26 21.02 32.47 94.43 29.52 35.78 40.69 38.16 165.97 193.87 199.50 248.24 65.62 121.00 81.99 121.96 71.66 27.42 206.99 172.67 141.12 46 E17a_E18a KnownJunction 0 22.00 59.20 54.85 21.91 46.01 102.27 37.76 30.68 49.25 41.15 163.04 145.70 160.87 252.28 64.65 152.44 89.20 116.82 122.92 26.33 185.39 213.95 138.12 47 ER18a ExonRegion 0 31.77 61.03 39.80 24.75 25.65 82.94 23.68 29.96 48.78 33.96 153.43 119.13 143.67 212.50 66.26 119.29 87.72 101.52 64.22 20.22 187.01 172.67 118.34 48 E18_Da NovelBoundary 0 35.12 15.66 11.03 5.43 24.02 10.73 12.41 5.59 4.51 7.12 16.64 0.00 21.91 25.02 15.33 7.78 13.09 23.79 17.69 2.94 28.17 2.45 52.84 49 E18a_E19a KnownJunction 0 24.60 78.87 34.09 30.10 19.35 51.33 17.27 32.90 47.54 26.38 130.98 122.29 160.54 146.33 60.20 168.84 56.47 87.80 85.84 33.36 180.64 124.30 150.15 50 ER19a ExonRegion 0 17.47 59.76 47.57 19.42 33.77 75.95 18.41 21.98 33.70 30.64 107.43 145.59 124.15 179.01 57.04 116.79 65.95 80.37 49.32 20.65 168.56 161.08 117.56 51 E19a_E20a KnownJunction 0 17.78 71.76 52.22 23.24 44.99 88.59 29.68 14.66 47.48 25.60 119.71 92.73 131.48 203.60 50.81 63.74 43.10 73.25 16.75 13.74 141.96 104.59 88.95 52 ER20a ExonRegion 0 50.48 86.52 56.62 25.78 66.24 107.54 39.81 32.28 45.21 39.07 149.40 151.76 151.39 244.71 68.27 175.92 66.53 98.46 69.16 14.49 161.52 216.32 160.06 53 E20a_E21a KnownJunction 1 65.49 116.82 57.72 19.81 47.11 73.14 44.47 23.95 31.89 36.02 156.41 211.72 173.20 180.88 24.23 158.76 59.47 81.70 50.64 14.45 137.52 109.18 127.87 54 ER21a ExonRegion 0 31.36 66.44 42.20 20.12 40.50 70.00 25.13 32.33 31.35 32.69 145.60 156.07 114.32 170.49 51.66 115.43 58.21 67.50 38.25 29.15 130.65 127.88 100.33 55 E21_Da NovelBoundary 0 12.97 20.72 21.47 0.00 3.90 0.00 6.09 0.00 5.01 16.41 21.85 11.25 13.96 12.36 0.00 12.13 11.78 15.30 8.94 11.57 18.53 37.17 12.04 56 E21a_E22a KnownJunction 0 32.82 57.16 34.71 26.30 21.48 68.54 32.33 44.28 37.35 34.79 127.82 123.64 87.01 186.42 92.22 144.49 72.65 87.92 64.75 23.01 149.25 197.66 129.75 57 ER22a ExonRegion 0 113.92 129.53 103.13 42.94 66.83 96.28 36.80 50.29 41.34 44.12 116.03 97.24 78.12 164.69 117.42 101.73 62.56 68.04 45.42 27.09 116.32 147.89 112.83 58 IG20 Intergenic 0 6.16 4.88 17.41 2.20 2.53 7.90 1.95 1.92 1.77 13.88 1.14 2.20 1.61 2.88 2.09 2.10 2.53 1.23 3.70 1.80 6.41 6.23 6.76 59 IG20_AR2 ActiveIntergenicRegion 0 5.94 5.52 13.99 1.05 5.05 3.29 5.70 5.09 1.94 5.67 1.30 2.80 4.96 1.53 1.58 1.72 0.00 1.53 0.69 0.00 0.83 1.85 2.70 60 IG20_AR1 ActiveIntergenicRegion 0 6.57 5.44 21.26 2.75 2.12 11.15 1.98 2.18 2.04 17.58 1.18 1.45 0.75 3.29 1.85 2.90 2.94 1.13 4.83 1.57 8.96 8.76 8.68