Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARHGAP28 Gene 0 8.32 13.13 11.87 9.46 17.49 55.50 21.81 11.82 18.24 9.77 0.16 0.80 1.18 0.64 1.75 0.64 0.60 8.26 3.54 9.51 72.92 42.14 13.09 2 400091 Transcript 0 0.00 0.00 0.00 0.00 0.00 14.88 1.11 1.89 1.83 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.38 0.00 1.84 64.53 5.16 5.93 3 262227 Transcript 0 1.24 2.07 1.84 1.50 2.31 2.59 3.12 1.09 2.30 0.80 0.25 1.21 1.80 0.97 2.65 0.97 0.91 1.13 0.80 2.17 3.88 0.47 1.70 4 419673 Transcript 0 0.00 0.00 0.00 0.45 0.00 6.11 0.00 0.58 1.24 1.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.71 30.12 2.08 2.94 5 418986 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 314319 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 383472 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 IG41_AR2 ActiveIntergenicRegion 0 1.05 1.01 0.90 0.00 1.32 6.96 1.31 0.00 1.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.79 0.00 1.80 19.92 2.06 3.08 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 3.82 2.21 1.45 2.07 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 1.06 39.61 1.86 0.67 10 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 25.95 0.00 2.34 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.97 0.00 2.62 89.45 8.45 11.18 11 I1_AR4 ActiveIntronRegion 0 1.33 1.45 7.22 1.74 2.21 0.52 3.03 0.23 1.09 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.54 0.00 4.47 16.61 1.17 0.00 12 E2_Aa NovelBoundary 0 173.73 144.51 249.40 253.01 189.30 105.79 211.01 302.59 208.71 217.37 102.76 57.32 82.46 32.37 93.33 470.47 191.21 408.52 97.60 143.30 66.97 52.60 141.96 13 ER2a ExonRegion 0 2.48 4.14 3.68 3.01 4.62 5.19 6.23 2.18 2.93 1.59 0.50 2.43 3.60 1.93 5.31 1.95 1.82 2.27 1.59 4.33 4.72 0.94 3.40 14 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 15 ER3a ExonRegion 0 0.00 0.00 0.00 0.45 0.00 6.11 0.00 0.58 1.24 1.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.71 30.12 2.08 2.94 16 ER3b ExonRegion 0 0.53 1.58 2.18 3.00 2.70 35.70 5.98 4.87 10.49 8.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.69 4.54 13.38 169.89 23.43 15.28 17 E3a_E4b KnownJunction 0 0.00 6.71 6.48 1.47 0.00 18.23 14.18 1.77 21.01 16.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.70 4.61 8.44 273.06 37.90 11.61 18 ER4a ExonRegion 0 0.00 1.22 0.98 0.55 0.00 3.67 2.12 0.35 3.95 3.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.02 0.64 1.70 48.48 7.08 2.35 19 ER4b ExonRegion 0 2.49 3.72 4.04 3.12 2.70 45.47 11.99 7.79 17.10 15.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.93 7.63 15.39 259.41 53.15 25.63 20 E4a_E6a KnownJunction 0 0.00 0.00 3.37 1.83 8.32 39.35 10.42 2.01 21.93 14.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.08 3.58 12.21 250.88 78.62 36.28 21 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 0 0.66 2.56 3.77 3.34 4.49 33.88 13.07 9.27 14.86 12.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.86 4.93 19.29 234.68 41.40 30.35 23 E6a_E7a KnownJunction 0 3.78 6.71 4.64 3.80 4.16 52.36 27.20 21.24 11.14 16.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.32 28.42 25.89 263.97 64.11 50.36 24 ER7a ExonRegion 0 1.51 6.10 3.73 3.98 0.98 42.56 19.57 9.51 16.44 12.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.46 7.79 12.79 248.60 67.18 21.93 25 E7a_E8a KnownJunction 0 2.74 5.72 1.83 7.26 0.00 51.22 14.00 6.28 18.87 10.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.96 0.00 20.45 187.56 79.97 7.94 26 ER8a ExonRegion 0 0.22 3.54 2.75 5.92 12.31 52.86 17.51 6.63 13.54 13.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.80 1.95 18.50 176.74 36.82 22.08 27 E8a_E9a KnownJunction 0 0.00 3.35 4.85 7.23 26.49 59.62 26.98 6.86 13.48 14.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.86 9.41 17.90 184.90 40.84 41.49 28 ER9a ExonRegion 0 2.26 6.91 1.54 9.35 17.51 60.05 26.20 11.77 20.96 15.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.57 5.03 11.56 141.79 58.80 25.03 29 E9a_E10a KnownJunction 0 13.26 2.50 2.66 10.69 0.00 30.10 24.25 11.17 29.98 16.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.07 7.91 11.38 88.65 63.62 23.90 30 ER10a ExonRegion 0 6.03 17.09 4.37 8.09 11.57 59.70 24.79 15.35 27.20 17.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.38 6.51 8.22 143.21 63.01 20.93 31 E10a_E11a KnownJunction 0 3.33 15.59 2.84 8.66 35.14 92.56 64.04 8.75 33.65 13.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 19.20 6.01 145.05 88.18 11.35 32 ER11a ExonRegion 0 2.02 5.68 4.01 8.31 14.66 63.68 35.60 9.79 25.05 15.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.34 6.92 12.67 186.57 82.10 23.88 33 E11a_E12a KnownJunction 0 0.00 3.09 5.94 7.03 8.66 54.91 47.03 9.90 30.50 17.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.38 8.85 18.86 143.57 142.80 15.28 34 ER12a ExonRegion 0 0.00 10.30 4.54 10.29 8.85 51.82 30.91 5.19 29.80 14.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.50 7.64 17.48 186.04 80.54 18.94 35 E12a_E13a KnownJunction 0 0.00 22.69 0.00 6.46 12.99 63.94 28.62 6.37 33.82 10.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.78 4.33 8.44 195.53 62.95 19.55 36 ER13a ExonRegion 0 4.77 15.77 8.25 8.57 13.58 60.03 29.09 6.19 29.32 12.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.98 6.74 23.09 186.03 76.82 31.04 37 E13a_E14a KnownJunction 0 3.04 2.50 14.22 8.29 19.35 62.52 17.89 6.90 28.47 14.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.06 14.31 13.68 214.86 34.23 31.16 38 ER14a ExonRegion 0 2.42 6.37 7.37 6.68 3.77 60.29 11.90 6.64 24.30 12.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.19 4.53 17.18 244.35 45.79 25.69 39 E14a_E15a KnownJunction 0 0.00 8.75 5.00 3.40 7.30 77.51 21.11 3.61 29.83 14.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.05 9.13 17.96 242.97 32.33 36.36 40 ER15a ExonRegion 0 4.19 8.49 7.53 4.32 14.45 64.80 22.75 6.77 33.18 17.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.49 5.13 19.17 235.06 43.89 34.28 41 E15a_E16a KnownJunction 0 3.48 12.43 0.00 3.50 4.33 54.06 20.23 9.41 17.04 12.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.09 0.00 25.69 205.66 38.76 36.36 42 ER16a ExonRegion 0 6.02 6.30 4.76 5.30 8.00 85.95 18.67 6.96 22.08 11.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.79 6.65 20.40 242.00 50.46 28.57 43 E16a_E17a KnownJunction 0 24.60 8.95 8.40 8.72 0.00 38.90 23.63 7.52 27.57 14.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.19 12.05 16.68 296.47 68.46 50.28 44 E17_Aa NovelBoundary 0 0.00 0.00 0.00 3.53 0.00 27.43 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 45 ER17a ExonRegion 0 7.39 8.24 5.61 7.70 13.14 55.85 16.98 15.31 23.97 10.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.78 3.80 16.72 312.35 37.25 31.12 46 E17a_E18a KnownJunction 0 0.00 6.25 3.08 5.86 12.99 68.94 15.63 17.50 23.87 9.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.46 0.00 18.73 237.90 22.23 23.56 47 ER18a ExonRegion 0 4.27 15.96 9.60 6.83 15.11 78.78 19.20 7.56 20.69 9.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.07 4.54 21.50 206.06 52.35 22.58 48 E18a_E19a KnownJunction 0 0.00 0.00 2.90 0.00 0.00 4.54 2.25 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 0.00 0.00 49 E18a_E20a KnownJunction 0 9.63 16.58 5.47 12.35 13.84 124.02 33.78 12.12 19.70 14.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.11 4.61 16.87 181.32 72.56 11.87 50 ER19a ExonRegion 0 0.78 2.87 5.11 2.10 0.98 7.48 4.09 0.00 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.00 0.78 8.56 1.38 0.00 51 E19_Da KnownBoundary 0 0.00 0.00 1.83 1.33 0.00 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 4.94 8.70 0.00 52 ER19b ExonRegion 0 0.74 0.00 0.98 2.23 0.94 3.41 0.47 0.00 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.21 0.00 0.00 3.91 0.88 0.00 53 ER20a ExonRegion 0 2.18 18.74 4.68 10.46 19.64 108.34 19.00 13.51 20.31 11.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.11 6.22 18.10 105.68 61.38 20.96 54 E20a_E21a KnownJunction 0 6.59 21.90 2.84 7.46 17.91 117.15 37.94 21.81 15.22 12.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.76 9.51 21.16 39.78 77.58 31.16 55 ER21a ExonRegion 0 16.83 24.43 23.42 17.43 34.07 100.91 37.92 22.74 30.72 15.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.59 4.33 11.05 64.35 74.22 16.03 56 IG42_AR6 ActiveIntergenicRegion 0 0.00 1.08 16.92 0.72 10.63 0.00 17.87 5.00 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.88 0.00 0.19 0.00 0.00 0.00