Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CLUL1 Gene 0 3.25 21.43 8.78 11.33 11.43 1.69 2.95 22.01 19.77 9.62 0.59 2.46 1.20 1.93 1.85 1.14 1.27 1.72 10.75 2.78 5.75 0.16 0.38 2 400606 Transcript 0 0.00 2.75 1.41 0.39 1.03 0.71 0.26 0.50 2.89 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.08 0.00 0.00 0.00 0.00 3 338387 Transcript 0 0.05 0.00 0.77 0.04 2.86 0.00 0.00 1.75 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 5.50 2.82 0.78 2.07 1.42 0.51 1.00 3.99 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.15 0.00 0.00 0.00 0.00 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 I1_AR2 ActiveIntronRegion 0 0.83 0.00 0.00 0.79 2.61 0.36 0.26 1.28 0.36 1.98 0.00 0.00 0.00 0.26 1.20 0.00 0.00 2.09 0.00 0.19 9.82 0.00 0.00 7 ER2a ExonRegion 0 0.11 0.00 0.00 0.07 1.48 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 1.54 0.00 4.24 0.00 0.00 3.49 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 0.85 5.57 7.52 5.33 2.74 0.79 0.62 8.83 13.26 2.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.71 0.23 0.94 0.00 0.00 10 E3a_E4a KnownJunction 0 0.00 5.72 14.13 4.06 6.37 0.00 0.00 11.95 13.86 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.79 2.43 0.00 0.00 0.00 11 ER4a ExonRegion 0 2.90 17.16 11.13 6.12 12.84 2.51 0.86 19.78 20.59 8.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 26.23 1.66 1.51 0.00 0.00 12 E4a_E5a KnownJunction 0 0.00 11.64 6.98 6.76 7.22 0.00 0.00 23.17 19.62 5.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.89 3.26 0.00 0.00 0.00 13 I4_AR2 ActiveIntronRegion 0 1.47 3.04 13.22 6.03 7.26 9.03 4.39 5.95 2.36 0.83 0.82 0.00 0.00 2.05 3.23 0.00 0.29 7.97 2.60 1.65 16.23 0.00 0.00 14 I4_AR3 ActiveIntronRegion 0 2.97 8.76 11.12 3.12 16.95 7.99 2.90 3.54 3.76 1.58 1.93 21.13 0.00 4.52 0.55 3.40 0.00 4.22 0.53 0.00 11.86 0.00 0.00 15 I4_SR2 SilentIntronRegion 0 0.89 1.94 3.68 2.33 5.58 2.27 2.07 2.88 3.37 3.93 0.19 0.77 0.22 3.13 2.06 2.49 0.63 3.97 2.29 1.94 10.56 0.60 0.56 16 E5_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 12.39 0.00 5.30 4.39 1.79 3.33 0.00 0.00 0.00 6.65 0.00 0.00 0.00 0.00 0.00 0.00 8.77 0.00 0.00 17 ER5a ExonRegion 0 2.23 15.87 11.77 9.35 9.86 2.78 1.61 27.59 23.53 9.15 0.59 2.16 1.17 3.80 5.60 3.61 0.00 4.17 29.81 0.95 7.36 0.00 0.00 18 E5a_E6a KnownJunction 0 6.74 11.84 11.21 11.55 16.98 0.00 0.00 31.13 24.13 13.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.14 0.00 0.00 0.00 0.00 19 I5 Intron 0 0.38 1.44 1.13 1.35 1.43 0.33 1.06 3.54 2.53 3.03 0.00 0.32 0.00 2.96 2.36 1.19 0.29 1.47 2.26 1.23 7.53 0.37 0.65 20 I5_SR1 SilentIntronRegion 0 0.38 1.45 1.14 1.35 1.43 0.33 1.06 3.55 2.54 3.04 0.00 0.32 0.00 2.97 2.36 1.19 0.29 1.47 2.27 1.23 7.54 0.37 0.65 21 ER6a ExonRegion 0 4.35 31.61 9.13 20.10 16.60 1.08 2.50 23.55 21.82 11.32 0.00 0.84 0.00 1.25 0.92 1.05 1.94 0.32 14.36 0.96 4.15 0.25 0.69 22 E6a_E7a KnownJunction 0 9.85 51.18 7.01 14.95 37.10 0.00 0.00 16.72 25.90 7.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.40 2.49 0.00 0.00 0.00 23 I6_SR2 SilentIntronRegion 0 0.15 1.30 1.76 2.23 1.94 0.00 1.16 3.81 3.07 3.66 0.41 0.25 0.00 3.40 1.89 1.25 0.69 0.84 1.89 0.97 9.59 0.27 0.21 24 I6_AR3 ActiveIntronRegion 0 0.71 1.15 1.57 4.45 4.80 0.53 2.36 4.18 1.61 3.11 0.00 1.03 0.00 3.04 2.96 0.00 0.00 4.51 3.23 1.95 12.07 0.24 0.27 25 E7_Aa NovelBoundary 0 0.00 0.00 0.00 3.26 0.00 0.00 0.00 2.55 3.15 0.00 0.00 0.00 0.00 2.47 0.00 3.59 0.00 0.00 0.00 0.00 9.02 0.00 0.00 26 ER7a ExonRegion 0 4.26 33.44 15.71 17.57 12.06 0.00 0.00 21.62 30.00 11.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.64 2.48 2.46 0.00 0.04 27 E7_Da NovelBoundary 0 0.00 0.00 0.00 1.60 3.57 0.00 0.00 2.22 1.33 0.00 0.00 0.00 0.00 2.47 0.00 3.25 0.00 0.00 0.00 6.01 9.14 0.00 0.00 28 E7a_E8a KnownJunction 0 7.41 52.95 19.13 12.52 8.66 0.00 0.00 20.21 20.69 8.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.40 0.00 0.00 0.00 0.00 29 E8_Aa NovelBoundary 0 0.00 9.21 3.64 4.06 8.23 0.00 0.00 0.00 4.48 8.86 0.00 0.00 0.00 9.59 0.00 0.00 4.02 1.74 0.00 2.88 22.73 3.12 0.00 30 ER8a ExonRegion 0 3.98 35.71 9.75 12.28 12.68 0.87 2.54 26.09 22.16 8.08 1.83 0.85 0.00 6.57 1.17 1.47 3.13 6.53 4.13 5.05 19.78 0.49 0.67 31 E8_Da NovelBoundary 0 0.00 6.12 1.45 1.93 3.74 0.00 6.76 6.33 5.64 7.60 0.00 5.70 0.00 9.89 0.00 0.00 0.00 0.00 0.00 3.26 11.00 0.00 4.10 32 E8a_E9a KnownJunction 0 6.96 17.63 7.75 10.89 0.00 0.00 0.00 24.23 22.31 5.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER9a ExonRegion 0 2.71 15.47 9.44 9.01 4.14 0.50 4.25 32.99 21.78 13.13 0.00 2.86 1.05 1.79 1.76 2.36 0.90 1.77 2.59 3.37 13.21 0.57 0.00 34 E9_Da NovelBoundary 0 7.26 2.70 4.79 1.66 3.31 0.00 3.89 2.18 6.42 6.31 0.00 0.00 0.00 0.00 0.00 12.90 3.65 0.00 4.61 17.77 8.03 0.00 0.00 35 E9a_E10a KnownJunction 0 0.00 30.46 4.38 7.89 3.90 0.00 0.00 37.58 20.23 11.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 I9 Intron 0 0.53 2.77 1.70 1.84 3.09 0.54 3.45 2.51 2.38 2.36 0.61 1.99 0.72 2.27 1.01 3.77 1.50 3.29 1.88 4.15 12.73 0.52 0.60 37 I9_SR1 SilentIntronRegion 0 0.53 2.81 1.72 1.87 3.14 0.55 3.50 2.55 2.41 2.40 0.62 2.02 0.73 2.30 1.03 3.83 1.52 3.34 1.91 4.21 12.92 0.53 0.61 38 E10_Aa NovelBoundary 0 7.63 9.14 64.78 8.06 45.76 30.49 20.98 27.48 6.39 17.06 12.37 5.85 6.82 30.43 55.01 20.08 68.35 5.26 4.80 24.48 14.64 3.12 0.00 39 ER10a ExonRegion 0 4.38 18.36 6.63 9.89 15.69 3.80 7.39 25.69 19.90 13.20 1.75 8.76 5.07 2.31 4.46 1.15 2.14 1.31 2.89 6.65 2.57 0.00 0.76