Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SEPT9 Gene 0 209.88 222.77 742.44 238.12 170.91 253.35 209.54 405.90 362.96 512.11 586.65 137.69 220.69 579.56 451.97 261.97 425.51 318.27 604.33 371.98 1155.90 298.34 299.30 2 427177 Transcript 0 2.62 3.19 0.32 0.36 0.47 4.40 16.61 6.48 5.22 10.18 0.00 0.00 0.00 20.76 15.94 5.23 4.56 3.52 43.45 3.37 0.39 0.37 4.94 3 449803 Transcript 0 0.17 0.00 0.28 0.00 0.00 0.00 0.63 0.21 0.00 0.28 0.00 0.57 0.00 0.43 0.00 0.00 0.00 0.00 0.00 1.19 3.36 0.17 0.00 4 329047 Transcript 1 16.92 2.27 15.96 4.56 4.70 4.46 2.55 7.71 7.92 8.84 0.12 6.50 10.23 96.87 13.44 14.65 34.75 0.17 0.51 0.27 243.39 170.39 255.19 5 423034 Transcript 1 41.50 50.71 140.45 40.46 27.70 63.74 37.11 197.82 135.39 325.26 25.25 15.72 9.51 60.61 12.83 137.45 9.33 228.95 1173.35 161.07 781.76 55.39 279.14 6 427674 Transcript 0 0.85 1.50 2.40 1.53 0.23 0.44 1.29 1.47 2.10 6.63 0.01 0.00 0.00 0.01 0.35 0.32 0.01 0.24 17.18 2.77 115.64 7.55 8.35 7 397613 Transcript 0 0.00 0.29 0.53 0.10 0.00 0.00 0.09 1.23 0.18 0.57 0.00 0.00 0.00 1.51 0.00 2.76 1.65 0.53 31.85 1.37 3.15 0.89 10.51 8 407798 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 431235 Transcript 0 32.58 18.08 43.15 12.75 26.91 70.91 37.04 32.14 36.79 37.14 44.18 5.49 4.85 89.10 75.35 43.86 93.15 33.77 14.21 41.96 83.42 7.52 12.41 10 427180 Transcript 0 4.66 0.71 2.55 1.57 2.68 1.77 6.64 3.38 3.07 2.90 1.31 2.26 1.94 2.74 3.59 2.18 3.06 3.45 3.22 5.18 12.93 0.56 5.80 11 ER1a ExonRegion 0 2.06 3.35 0.64 0.71 0.94 8.80 10.87 3.39 4.16 11.39 0.00 0.00 0.00 27.21 15.81 10.45 9.13 1.90 47.93 6.74 0.78 0.73 1.17 12 E1a_E3a KnownJunction 0 3.19 3.03 0.00 0.00 0.00 0.00 22.35 9.57 6.28 8.97 0.00 0.00 0.00 14.30 16.07 0.00 0.00 5.14 38.97 0.00 0.00 0.00 8.71 13 ER2a ExonRegion 0 0.34 0.00 0.56 0.00 0.00 0.00 1.27 0.41 0.00 0.56 0.00 1.14 0.00 0.86 0.00 0.00 0.00 0.00 0.00 2.37 0.43 0.33 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 15 ER3a ExonRegion 0 0.56 0.57 0.32 1.08 0.09 0.58 7.76 10.07 7.17 23.80 0.07 2.35 0.00 18.52 3.82 6.10 4.46 3.08 27.94 4.44 5.37 2.67 6.70 16 E3a_E8c KnownJunction 0 0.00 0.00 0.00 3.43 0.00 0.00 1.77 20.25 6.77 49.88 0.00 6.30 0.00 21.31 4.45 7.60 17.11 1.70 12.42 8.76 5.93 6.18 0.00 17 E4_Aa NovelBoundary 0 3.04 0.00 1.83 1.47 0.00 7.84 6.14 0.00 0.00 0.00 0.00 0.00 0.00 4.65 4.94 0.00 0.00 0.00 0.00 0.00 30.95 29.39 148.19 18 ER4a ExonRegion 0 5.92 1.24 9.71 4.36 5.08 6.13 5.10 5.23 6.55 6.70 0.24 6.70 13.64 75.84 17.10 13.14 24.72 0.35 1.02 0.54 81.77 89.24 140.84 19 E4a_E8c KnownJunction 1 27.93 3.29 22.21 4.76 4.33 2.78 0.00 10.19 9.29 10.99 0.00 6.30 6.82 117.90 9.77 16.15 44.79 0.00 0.00 0.00 405.01 251.55 369.54 20 ER5a ExonRegion 1 10.03 20.45 33.80 8.21 13.63 46.96 18.75 64.42 35.66 110.14 12.59 6.82 6.03 25.27 7.48 61.62 5.85 86.30 627.59 54.90 332.18 19.55 177.91 21 E5a_E8c KnownJunction 1 72.98 80.97 247.09 72.72 41.77 80.52 55.47 331.22 235.12 540.38 37.90 24.61 12.99 95.94 18.17 213.28 12.81 371.59 1719.11 267.24 1231.35 91.24 380.38 22 ER6a ExonRegion 0 1.71 3.00 3.01 1.23 0.46 0.89 2.58 2.94 4.21 5.06 0.02 0.00 0.00 0.02 0.71 0.65 0.02 0.47 20.42 5.54 65.04 6.34 13.11 23 E6a_E8c KnownJunction 0 0.00 0.00 1.80 1.83 0.00 0.00 0.00 0.00 0.00 8.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.93 0.00 166.24 8.76 3.59 24 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.31 25 ER8a ExonRegion 0 0.00 0.58 1.05 0.19 0.00 0.00 0.19 2.47 0.35 1.15 0.00 0.00 0.00 3.02 0.00 5.52 3.30 1.06 63.71 2.74 6.30 1.79 19.72 26 ER8b ExonRegion 1 65.61 77.28 251.20 72.23 45.49 69.68 51.63 354.33 237.14 543.63 52.19 34.64 23.45 233.87 40.62 389.35 66.02 399.11 3446.56 304.25 1877.56 360.45 1318.55 27 ER8c ExonRegion 1 39.72 94.32 407.79 120.89 63.62 151.43 105.31 336.79 268.35 617.07 39.14 45.22 35.47 342.38 84.04 159.27 99.02 238.42 1071.57 340.73 1560.45 348.56 497.36 28 E8_Da KnownBoundary 1 115.95 170.89 550.48 145.57 62.48 209.25 153.38 402.44 351.18 763.47 51.96 49.22 26.30 317.85 75.04 99.89 107.43 282.55 709.48 395.20 2001.15 408.24 302.78 29 E8a_E8d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER8d ExonRegion 1 67.19 131.87 514.07 141.75 48.86 156.83 120.61 400.78 309.10 708.38 41.91 34.36 42.59 325.94 98.93 123.20 89.93 192.43 589.61 374.51 1520.36 367.28 341.36 31 E8_Ad KnownBoundary 1 122.47 169.71 621.36 181.80 80.56 288.41 204.65 445.45 349.56 734.51 49.01 32.26 53.08 376.72 125.97 127.83 114.54 163.28 584.30 475.22 1404.32 329.44 419.73 32 ER8e ExonRegion 1 80.45 134.68 384.63 107.13 73.33 223.40 151.46 272.03 221.07 551.99 40.57 28.63 18.95 355.71 66.44 100.23 69.38 170.78 478.09 325.32 1543.99 268.30 280.52 33 E8_Db NovelBoundary 0 61.20 133.92 315.28 97.39 52.21 159.00 152.58 175.43 197.94 387.43 20.27 29.11 32.95 253.87 39.93 57.34 37.21 182.10 431.35 225.56 1165.68 173.11 215.46 34 E8c_E11a KnownJunction 1 126.76 204.77 553.14 169.18 83.96 224.02 134.74 370.65 337.96 668.92 30.96 22.66 33.93 310.67 104.95 129.97 55.26 359.03 513.99 311.79 1498.90 309.23 380.98 35 ER8f ExonRegion 1 71.87 157.29 425.58 124.38 54.79 191.67 123.99 256.11 246.11 529.57 37.99 19.20 37.52 322.21 93.47 101.18 60.28 285.04 482.24 282.98 1461.06 259.81 308.22 36 I8_AR3 ActiveIntronRegion 0 36.53 46.31 29.22 34.64 57.09 15.07 38.61 53.96 21.35 38.87 1.20 5.34 6.77 4.22 9.40 26.31 10.88 15.52 19.98 29.35 57.11 7.30 32.98 37 I8 Intron 0 46.02 30.55 26.45 30.29 55.79 15.28 38.88 31.22 16.45 24.45 1.38 4.03 4.89 4.06 5.04 10.20 5.08 9.14 14.70 20.85 37.82 5.29 25.21 38 I8_AR1 ActiveIntronRegion 0 82.98 63.72 43.41 46.12 89.39 22.36 64.81 50.89 24.58 32.86 0.76 6.40 6.53 3.99 8.01 13.95 6.84 11.91 20.46 27.92 37.04 8.03 32.32 39 I8_SR2 SilentIntronRegion 0 25.54 10.95 16.94 22.40 39.76 11.90 24.65 21.39 12.42 21.85 2.01 2.08 3.06 4.17 3.11 8.10 4.28 8.16 11.57 16.43 41.59 3.52 22.67 40 I8_AR1 ActiveIntronRegion 0 51.94 21.62 39.85 19.29 27.82 16.17 21.85 34.08 27.27 34.79 6.99 15.84 7.52 23.52 26.98 15.46 16.80 25.03 17.65 28.39 35.88 6.36 23.25 41 ER9a ExonRegion 0 23.00 17.42 27.99 12.24 20.87 32.01 32.31 29.00 29.08 30.52 44.36 4.68 3.85 59.78 54.77 38.67 69.23 26.87 11.01 35.73 66.58 3.16 20.72 42 E9a_E11a KnownJunction 0 42.16 18.75 58.31 13.25 32.94 109.82 41.78 35.28 44.50 43.76 44.01 6.30 5.84 118.43 95.93 49.05 117.06 40.67 17.41 48.19 100.26 11.88 4.10 43 I9_SR2 SilentIntronRegion 0 38.12 28.05 29.45 18.70 37.34 10.96 37.10 32.22 12.70 35.31 10.04 14.99 11.97 9.80 12.98 14.90 18.48 12.70 34.50 30.87 64.62 5.92 41.48 44 ER10a ExonRegion 0 9.33 1.42 5.10 3.15 5.37 3.54 13.28 6.76 6.13 5.81 2.61 4.52 3.89 5.49 7.19 4.37 6.11 6.89 6.44 10.36 25.86 1.13 11.60 45 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER11a ExonRegion 0 252.19 332.66 969.13 294.67 218.27 361.58 282.26 633.42 568.01 924.48 668.32 139.24 207.95 857.92 494.12 360.11 512.93 486.60 823.43 676.39 2017.54 478.88 447.50 47 E11a_E12a KnownJunction 0 261.31 381.05 2080.35 623.46 368.25 690.85 558.13 1161.08 1125.68 1455.49 852.79 254.03 382.12 1330.63 1178.07 982.56 872.00 1055.07 1455.38 1187.45 2732.23 724.64 651.66 48 ER12a ExonRegion 0 340.27 491.29 2177.86 656.58 478.23 771.18 563.70 1292.55 1220.00 1603.75 1632.94 469.09 941.10 1629.47 1175.23 872.58 1094.03 1091.29 1652.31 1285.63 3126.00 899.27 865.10 49 E12a_E13a KnownJunction 0 336.36 685.73 2703.51 804.23 492.36 935.54 817.45 1568.82 1522.96 2008.82 1944.91 668.47 1200.73 2123.56 1644.23 942.66 1355.30 1238.05 2696.45 1521.93 3161.89 1340.03 1037.25 50 ER13a ExonRegion 0 418.55 688.76 2269.19 668.79 495.08 796.63 620.65 1434.41 1399.60 1809.33 2763.24 618.59 1142.94 1816.02 1229.42 760.50 1674.68 1088.98 1918.72 1449.48 3855.17 972.65 736.95 51 E13a_E14a KnownJunction 0 648.71 759.73 2122.46 622.73 518.51 761.72 561.09 1400.46 1283.58 1659.42 2309.11 810.41 1446.66 1920.19 1376.85 780.39 1500.79 935.48 1898.60 1238.72 3522.48 917.89 695.28 52 ER14a ExonRegion 0 842.91 675.97 2000.59 593.20 455.28 638.39 605.04 1263.98 1227.66 1643.95 2199.81 793.61 1402.05 1926.76 1435.51 793.43 1487.32 1041.90 1993.32 1223.01 3464.63 1023.94 783.79 53 E14a_E15a KnownJunction 0 437.63 703.82 1765.93 445.00 442.28 653.77 686.07 1140.63 1044.49 1426.77 1837.83 620.45 829.33 1556.07 1017.00 430.57 1341.93 700.89 1032.03 1116.51 2999.60 604.19 436.38 54 ER15a ExonRegion 0 611.76 625.24 1900.71 549.14 544.22 758.07 610.85 1154.48 1071.99 1407.31 1746.13 703.94 1135.42 1730.28 1102.55 703.06 1257.75 831.53 1394.60 1090.13 3030.75 717.93 599.97 55 E15a_E16a KnownJunction 0 781.84 1078.03 2663.54 783.12 660.87 826.68 714.64 1601.68 1497.47 1903.76 2374.76 555.18 1154.79 2026.73 1457.33 1196.44 1582.98 1472.34 2629.06 1402.28 3420.74 1415.53 936.09 56 ER16a ExonRegion 0 396.10 631.19 2337.32 660.10 579.69 772.62 689.85 1264.24 1247.54 1615.36 2188.69 760.50 1059.17 2107.35 1567.52 835.72 1597.08 961.89 1719.57 1221.36 3612.25 890.21 631.29 57 E16a_E17a KnownJunction 0 226.34 431.63 2473.01 716.59 481.32 835.88 693.58 1317.24 1235.23 1616.96 2187.82 494.71 920.88 1585.80 1322.46 558.74 1678.91 804.73 1288.60 1135.04 3773.79 723.41 508.42 58 ER17a ExonRegion 0 252.50 435.10 2503.03 804.90 387.93 616.69 529.64 1364.93 1285.32 1646.40 2289.81 652.68 1225.65 1835.79 1525.31 922.92 1586.51 1230.03 1732.18 1323.14 3469.12 907.38 942.33 59 E17a_E18a KnownJunction 0 477.64 666.20 2966.48 1017.85 597.37 689.55 608.92 1704.74 1557.42 1914.91 2493.89 824.07 1372.31 2380.49 2257.99 1615.30 1722.20 1470.81 3084.14 1744.75 3827.79 1753.30 1344.47 60 I17 Intron 0 49.29 39.81 48.14 40.68 31.84 26.77 37.30 52.89 39.75 38.55 23.11 10.10 9.56 32.90 26.64 19.66 19.52 37.00 49.34 44.73 87.24 51.36 31.37 61 I17_AR2 ActiveIntronRegion 0 34.83 55.69 48.31 48.98 37.46 32.79 45.03 55.24 47.89 42.74 27.97 8.72 8.56 36.83 25.07 24.94 24.32 36.23 56.77 51.82 87.04 53.90 35.86 62 I17_AR4 ActiveIntronRegion 0 90.12 52.97 64.99 60.56 47.06 31.38 51.83 71.92 49.42 45.36 25.26 20.93 16.71 38.31 35.15 25.53 23.62 50.63 55.60 53.56 104.69 77.77 36.21 63 I17_SR5 SilentIntronRegion 0 85.53 24.31 56.09 48.26 35.64 35.18 34.96 68.04 39.47 49.99 24.07 8.66 6.40 21.56 27.30 13.64 18.00 63.08 30.70 40.04 76.73 57.68 25.36 64 ER18a ExonRegion 0 483.95 511.45 2841.89 899.29 479.63 717.02 518.76 1725.13 1538.83 2052.43 2942.73 710.62 1107.48 2344.51 1825.17 1205.43 1903.41 1318.37 2448.99 1586.94 4354.78 1272.23 913.07 65 E18a_E19a KnownJunction 0 973.65 720.86 2589.62 770.60 635.57 1088.63 746.44 1592.61 1360.14 1853.47 3209.08 646.26 1040.19 2445.59 1811.37 1016.06 2067.13 959.65 2338.51 1659.99 4683.59 968.10 713.64 66 ER19a ExonRegion 0 547.19 428.86 1050.32 344.38 255.02 479.37 375.96 651.83 575.30 832.31 1133.72 341.54 632.19 1066.83 857.20 423.56 854.91 443.67 949.35 659.39 2116.80 485.90 427.41 67 E19_Da KnownBoundary 0 139.21 334.74 1285.97 359.69 159.76 360.93 303.57 566.12 547.59 715.04 674.22 179.91 214.27 644.60 594.11 218.15 580.74 442.06 602.28 489.48 1454.30 291.53 252.25 68 ER19b ExonRegion 0 426.44 436.78 1423.29 479.70 341.98 451.99 386.44 655.62 571.72 740.50 1025.53 143.02 194.37 948.85 881.07 446.76 733.88 528.17 815.47 534.38 1616.46 430.10 411.41 69 IG19_SR7 SilentIntergenicRegion 0 1.12 1.28 32.69 0.55 6.29 0.22 14.68 6.08 2.43 16.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.51 0.28 6.17 0.26 0.06 0.90 70 IG19_AR6 ActiveIntergenicRegion 0 1.10 2.24 48.47 0.42 5.05 0.57 19.82 12.41 3.89 25.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.23 0.00 9.65 0.46 0.00 1.69 71 IG19_SR8 SilentIntergenicRegion 0 3.04 0.24 28.98 0.24 6.08 1.10 28.74 4.96 1.61 14.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.27 0.00 0.50 1.76