Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PYCR1 Gene 0 42.90 144.83 636.84 295.82 88.01 178.17 105.30 169.69 101.99 318.45 238.19 75.01 82.15 225.56 347.87 230.18 235.26 270.22 512.02 341.70 178.34 82.66 82.94 2 402252 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 405481 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 403172 Transcript 0 6.88 30.50 167.26 68.48 13.38 51.80 21.18 37.59 27.79 75.12 58.47 16.24 12.90 64.96 95.74 46.07 51.99 71.60 93.17 83.51 42.97 17.19 28.63 5 432920 Transcript 0 0.06 1.20 9.09 6.18 2.85 1.56 1.23 5.64 1.49 6.87 2.22 0.00 0.00 0.41 1.28 0.52 6.42 3.09 5.68 2.84 3.25 0.28 0.39 6 329875 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 337943 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 18.32 36.78 50.07 13.32 11.47 53.91 27.39 11.75 12.56 46.04 37.22 0.00 5.76 35.13 109.67 109.71 60.83 23.65 143.43 49.24 39.73 15.42 46.65 9 E1a_E3b KnownJunction 1 56.60 130.96 123.03 42.25 42.87 154.34 96.85 33.85 37.35 118.89 108.66 5.55 28.73 78.29 275.42 321.28 161.10 141.65 398.22 137.23 93.04 44.88 130.86 10 E2_Aa NovelBoundary 0 10.37 71.63 44.76 9.79 32.09 97.61 20.71 12.28 12.93 37.58 31.80 0.00 20.45 0.00 32.39 23.16 30.01 18.12 151.06 80.79 16.49 3.12 22.45 11 ER2a ExonRegion 0 0.12 2.39 8.40 2.61 1.97 3.13 2.45 2.44 1.31 3.54 2.44 0.00 0.00 0.81 2.56 1.05 3.59 4.02 6.93 3.13 1.81 0.55 0.78 12 E2a_E3b KnownJunction 0 0.00 0.00 9.79 9.76 3.74 0.00 0.00 8.83 1.68 10.21 2.00 0.00 0.00 0.00 0.00 0.00 9.26 2.16 4.42 2.56 4.70 0.00 0.00 13 ER3a ExonRegion 0 3.50 12.05 65.19 18.21 8.83 33.58 13.10 16.79 7.03 43.85 9.64 2.02 4.47 10.44 26.09 15.42 8.47 35.77 62.98 43.68 10.73 5.60 6.53 14 E3_Ab KnownBoundary 0 9.56 36.97 109.28 36.96 20.88 55.93 18.15 25.92 21.85 72.31 9.95 6.30 6.17 31.08 80.60 15.89 4.39 77.68 81.79 67.24 21.81 17.76 8.37 15 ER3b ExonRegion 0 34.09 143.16 415.04 179.53 54.34 171.57 112.04 87.98 84.10 254.24 146.66 37.70 33.58 105.84 215.08 236.53 175.18 204.97 673.32 278.82 125.28 45.08 67.54 16 E3a_E4a KnownJunction 1 25.12 51.44 450.43 107.25 33.62 55.65 35.46 77.55 63.02 205.09 184.10 60.17 85.38 63.39 128.56 75.11 198.97 123.66 208.95 211.12 142.03 18.31 3.76 17 ER4a ExonRegion 1 22.63 49.18 589.16 203.03 30.19 83.58 36.36 142.68 94.62 353.18 364.04 50.31 50.86 196.50 315.01 283.82 386.86 295.35 755.16 396.43 283.16 82.17 83.47 18 E4a_E5a KnownJunction 1 52.01 67.29 925.63 410.40 49.07 162.75 55.34 232.27 158.94 498.77 305.13 103.68 69.96 335.63 825.02 982.05 383.82 598.59 2730.43 692.54 267.56 180.09 378.07 19 ER5a ExonRegion 0 21.01 110.29 756.13 331.81 91.84 242.76 130.49 184.46 130.59 352.44 275.15 91.93 94.50 261.36 429.47 345.77 254.43 365.55 821.70 460.09 212.07 92.91 126.08 20 E5a_E6a KnownJunction 1 36.75 308.50 814.22 344.45 98.39 473.14 296.82 206.15 138.45 383.21 346.67 100.68 40.91 332.39 549.85 227.97 240.49 331.63 539.78 389.58 222.09 96.99 109.69 21 ER6a ExonRegion 0 48.28 184.84 737.40 270.48 81.03 182.45 107.00 164.35 99.92 331.38 270.74 80.68 58.77 277.23 430.68 198.18 280.81 315.94 482.78 413.70 208.13 80.94 91.41 22 E6a_E7a KnownJunction 0 62.90 129.78 697.49 275.06 74.11 215.61 107.27 128.68 102.86 301.79 211.84 48.17 95.29 198.89 347.49 164.57 254.79 263.77 304.10 347.71 206.27 80.15 66.41 23 E6a_E8b NovelJunction 0 3.56 8.35 46.30 8.92 0.00 7.61 12.28 9.49 5.73 28.63 7.11 6.30 0.00 13.66 22.25 8.72 3.93 21.27 16.57 13.87 2.66 0.00 12.21 24 E6a_E9a NovelJunction 0 3.56 15.06 42.04 13.52 0.00 8.18 5.48 7.52 0.00 4.97 2.42 0.00 0.00 9.01 19.41 7.78 0.00 19.90 21.37 17.51 3.15 0.00 3.50 25 ER7a ExonRegion 0 42.94 125.32 678.24 270.45 84.67 188.21 106.44 130.41 102.08 282.36 260.73 57.68 66.16 248.80 394.51 229.30 251.08 297.89 400.36 364.86 199.83 85.54 98.01 26 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E7a_E8b KnownJunction 0 40.38 140.24 699.59 310.65 47.45 236.51 108.73 156.37 110.76 277.91 254.59 72.92 47.56 222.14 355.28 195.85 210.38 277.49 445.66 351.86 187.25 67.97 119.85 28 E7a_E9a NovelJunction 0 16.89 62.82 147.57 53.84 3.99 26.58 23.72 17.66 12.24 54.56 41.01 13.35 6.82 48.09 84.55 55.97 43.57 97.83 90.83 55.74 45.96 14.45 14.60 29 ER8a ExonRegion 0 13.76 61.01 334.53 136.97 26.76 103.61 42.37 75.19 55.58 150.24 116.94 32.47 25.80 129.93 191.48 92.14 103.98 143.20 186.34 167.02 85.94 34.38 57.26 30 ER8b ExonRegion 0 53.28 144.93 699.00 336.18 81.39 180.14 96.45 185.52 128.50 322.89 302.18 68.74 78.78 250.64 426.98 222.25 243.58 342.82 512.90 397.34 208.96 92.25 95.38 31 E8a_E9a KnownJunction 0 76.01 253.57 741.16 351.74 79.46 193.13 93.49 244.10 139.58 334.81 327.24 97.68 110.71 241.98 474.07 242.16 274.15 292.12 606.98 451.64 247.91 100.55 70.51 32 I8 Intron 0 13.95 16.70 93.55 36.75 8.66 18.98 19.83 19.96 10.43 40.82 15.76 7.83 6.65 18.87 27.01 20.97 13.74 26.77 48.81 33.46 12.62 4.46 6.45 33 I8_AR1 ActiveIntronRegion 0 13.44 16.95 98.37 35.82 9.67 19.67 20.73 19.89 10.38 42.04 15.92 8.59 7.18 18.86 28.08 22.48 14.56 26.57 50.11 32.56 12.50 4.83 6.47 34 I8_SR1 SilentIntronRegion 0 18.12 15.93 66.03 44.83 2.39 15.38 14.77 21.35 11.30 34.57 15.53 3.19 3.46 19.86 21.28 11.97 9.01 29.39 42.72 41.17 13.96 2.17 6.67 35 E9_Aa NovelBoundary 0 19.48 31.24 108.51 68.92 0.00 25.78 21.55 22.30 18.52 51.66 7.00 18.46 0.00 17.72 9.02 8.72 8.32 25.99 49.60 26.14 14.64 2.82 3.33 36 ER9a ExonRegion 0 81.79 259.86 783.22 349.72 106.46 227.84 166.06 202.01 135.26 386.20 370.95 145.41 146.26 274.43 478.29 244.99 327.21 290.94 504.97 445.77 300.30 89.35 99.30 37 E9_Da KnownBoundary 0 174.99 287.51 1017.05 467.71 189.81 418.51 290.37 279.84 130.55 463.42 344.72 148.85 165.09 370.12 573.09 338.29 378.40 406.45 704.11 552.69 296.22 86.28 118.65 38 E9a_E9b KnownJunction 0 0.00 5.92 19.10 8.02 0.00 5.79 1.63 3.94 4.60 10.64 30.64 0.00 6.82 5.47 5.44 8.20 0.00 0.00 0.00 8.95 5.75 0.00 0.00 39 ER9b ExonRegion 0 82.22 270.11 1066.22 544.67 154.13 306.24 191.06 301.89 158.30 501.55 335.55 129.00 165.16 363.21 494.53 372.45 357.88 448.57 762.97 464.80 253.18 143.66 125.90 40 E9_Ab KnownBoundary 0 84.24 347.31 1051.86 477.83 191.77 377.40 232.96 255.03 144.10 542.72 371.04 214.12 186.35 372.18 430.56 193.88 371.95 367.98 562.65 506.03 246.80 130.92 98.51 41 ER9c ExonRegion 0 62.73 228.37 805.91 396.01 173.92 313.16 163.45 237.40 122.37 442.90 311.97 160.29 139.29 322.28 415.89 265.81 320.35 356.59 508.58 368.80 203.33 108.32 108.09 42 E9_Db KnownBoundary 0 95.13 199.50 1048.31 566.00 286.33 347.53 190.96 289.86 152.98 490.04 291.13 159.20 144.63 315.97 406.21 307.27 278.45 451.01 546.18 400.95 178.97 79.24 89.72 43 ER9d ExonRegion 0 36.93 119.44 583.06 298.97 94.34 134.83 84.16 178.44 99.57 328.04 226.70 66.61 79.12 219.48 341.40 214.41 216.38 200.85 460.40 329.48 162.82 83.75 67.45 44 IG9_AR1 ActiveIntergenicRegion 0 0.44 0.85 15.12 6.87 2.80 2.30 6.87 6.06 3.56 7.26 1.21 3.99 0.00 3.19 2.54 0.62 2.61 9.86 18.92 8.79 2.91 2.18 7.87