Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NPLOC4 Gene 0 75.84 74.42 125.21 94.57 105.48 115.50 129.43 153.73 230.75 185.47 153.61 117.10 86.75 229.58 282.13 190.77 169.50 137.58 148.48 128.23 133.52 127.38 131.20 2 331134 Transcript 1 49.87 53.43 94.92 59.19 71.93 79.84 85.38 139.00 182.53 155.42 169.37 58.96 34.08 182.05 243.74 127.43 183.03 117.42 112.57 88.99 146.88 82.37 80.93 3 374747 Transcript 0 22.27 17.91 22.08 26.06 33.06 28.71 37.69 29.47 45.33 28.22 17.88 27.42 30.19 40.09 55.76 40.71 26.65 30.14 40.79 27.55 20.89 28.04 37.88 4 ER1a ExonRegion 0 6.01 9.00 4.51 6.21 7.78 19.71 18.36 20.51 24.98 33.71 38.40 7.96 5.33 30.11 38.07 37.22 54.39 12.93 21.63 16.76 37.33 14.03 22.08 5 E1a_E3a KnownJunction 1 7.11 8.68 18.15 22.08 29.88 16.98 29.50 107.94 116.46 110.72 211.42 24.91 13.47 110.48 98.65 78.01 216.08 75.74 59.67 75.49 160.62 60.62 42.17 6 I1_SR2 SilentIntronRegion 0 7.89 9.36 15.92 10.62 22.03 4.26 17.19 16.34 18.45 5.38 0.94 5.98 6.29 0.71 7.55 2.02 2.88 2.67 3.70 9.48 0.85 3.03 3.70 7 ER2a ExonRegion 0 0.18 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.18 0.00 0.00 0.00 8 E3_Aa NovelBoundary 0 27.93 21.11 28.50 18.65 48.73 10.45 14.75 29.37 32.41 5.08 0.00 0.00 6.82 7.48 0.00 3.50 4.49 3.77 8.85 8.95 3.15 5.20 4.01 9 ER3a ExonRegion 1 29.37 39.99 46.90 42.91 62.47 45.12 69.70 167.98 249.22 202.92 318.50 160.78 50.14 233.81 221.14 336.62 383.19 178.71 198.67 155.50 200.48 158.24 228.99 10 E3_Da NovelBoundary 1 10.89 0.00 35.75 28.17 4.16 0.00 11.75 25.67 26.30 15.85 0.00 0.00 5.68 0.00 9.89 83.40 8.60 27.65 60.05 6.39 3.09 5.51 20.66 11 E3a_E4a KnownJunction 0 20.30 36.77 74.18 89.70 97.88 121.46 64.57 218.88 369.90 285.25 377.78 316.90 120.77 358.53 354.53 559.60 377.65 359.61 268.90 208.56 220.48 281.61 319.43 12 ER4a ExonRegion 0 34.56 36.62 116.45 98.94 83.54 164.00 116.09 228.46 361.55 257.53 310.97 370.38 140.78 339.90 364.43 342.45 375.10 167.61 208.29 188.33 231.82 223.95 186.54 13 E4a_E5a KnownJunction 0 45.86 29.67 171.40 123.26 92.95 241.28 215.20 291.71 501.01 361.70 523.45 484.51 217.36 462.60 510.91 363.49 655.73 181.19 257.51 243.40 372.76 271.57 203.25 14 ER5a ExonRegion 0 49.34 75.82 163.96 134.67 80.79 129.87 165.26 268.78 437.27 334.07 432.83 430.67 184.79 529.47 501.52 357.44 471.58 256.46 258.61 266.08 321.39 266.61 229.75 15 E5a_E6a KnownJunction 0 48.30 84.20 122.76 114.54 156.37 152.98 225.41 238.52 357.55 280.63 337.40 379.77 169.31 420.04 493.97 360.33 391.77 258.92 255.16 259.89 301.16 200.60 179.77 16 E5a_E7a NovelJunction 0 6.52 3.29 5.50 1.66 0.00 2.67 4.42 6.74 8.19 0.00 0.00 6.30 0.00 0.00 10.63 6.49 4.11 4.19 9.60 5.75 14.09 0.00 3.41 17 ER6a ExonRegion 0 31.92 66.49 134.72 108.98 112.05 180.27 158.52 209.67 412.81 278.63 377.35 346.00 205.88 516.80 543.42 380.55 391.19 328.30 282.26 265.39 283.69 188.41 260.88 18 E6a_E7a KnownJunction 0 51.94 80.71 149.08 111.31 180.73 219.53 200.50 215.76 420.86 275.47 446.85 270.99 246.41 552.54 609.43 498.25 422.91 342.70 353.33 267.49 280.90 186.82 294.16 19 E6a_E9a NovelJunction 0 0.00 5.85 0.00 0.00 0.00 2.21 11.22 0.00 1.42 3.33 2.16 0.00 0.00 2.47 4.45 4.36 0.00 1.62 0.00 0.00 8.77 0.00 0.00 20 I6 Intron 0 18.62 10.58 17.59 13.18 21.83 5.06 36.91 19.85 22.94 15.26 1.37 10.19 8.75 3.77 23.70 14.32 19.29 8.15 13.30 21.46 8.91 4.01 18.30 21 I6_SR1 SilentIntronRegion 0 20.49 12.07 19.16 14.30 24.30 5.64 40.50 21.76 24.65 16.19 1.46 10.91 9.64 3.75 24.46 14.64 19.14 8.77 14.61 22.98 9.71 4.12 18.51 22 E7_Aa NovelBoundary 0 13.26 3.22 10.70 37.82 15.79 15.84 51.49 39.02 36.23 32.61 4.21 0.00 6.33 4.77 33.87 43.15 21.32 16.75 16.38 30.94 14.52 22.60 14.43 23 ER7a ExonRegion 0 43.98 83.01 161.85 124.05 155.05 178.38 186.37 241.95 421.45 310.15 431.75 292.49 191.95 577.57 614.94 411.00 405.45 301.73 322.43 291.49 305.78 221.45 246.80 24 E7a_E8a KnownJunction 0 34.97 61.17 195.56 141.97 131.15 138.27 175.90 250.02 448.29 342.52 404.89 299.20 177.10 484.61 522.41 304.54 385.97 304.27 281.61 280.60 319.57 190.86 157.15 25 ER8a ExonRegion 0 67.63 101.86 173.28 146.19 120.49 172.69 209.00 273.68 455.24 343.25 383.15 259.94 207.12 536.72 649.46 429.98 389.98 393.12 281.78 332.67 301.62 198.20 249.28 26 E8a_E9a KnownJunction 0 128.10 182.66 176.66 137.11 190.83 226.69 389.07 337.96 511.94 378.89 417.42 144.95 206.48 587.79 764.57 552.50 400.37 325.70 333.94 362.35 343.79 298.51 256.86 27 ER9a ExonRegion 0 112.73 156.18 184.26 153.09 187.33 248.80 286.27 296.84 484.34 398.54 408.61 336.74 203.99 585.59 658.55 518.16 430.49 307.65 328.64 358.08 337.24 295.08 259.96 28 E9a_E10a KnownJunction 0 175.14 208.19 226.78 159.82 128.27 175.98 240.73 329.33 510.87 454.85 436.58 351.71 211.35 574.26 606.96 538.49 458.81 269.74 195.30 314.54 363.31 286.70 247.98 29 ER10a ExonRegion 0 107.67 159.51 220.99 146.41 215.69 281.25 289.92 320.08 533.33 432.32 470.23 360.54 181.29 585.24 580.05 477.32 481.10 282.41 284.78 302.98 346.06 288.89 273.88 30 E10a_E11a KnownJunction 0 104.17 134.19 230.71 175.50 277.59 294.94 334.58 344.00 556.36 492.03 502.29 315.55 143.66 487.85 604.49 382.38 480.13 293.24 328.95 324.06 321.86 316.39 290.41 31 I10 Intron 0 7.97 9.84 13.39 12.12 15.98 5.69 29.58 21.57 22.35 12.63 1.18 6.44 8.16 1.22 12.53 9.64 8.32 7.86 6.18 13.44 4.34 2.30 9.45 32 I10_AR1 ActiveIntronRegion 0 8.96 6.78 13.18 8.97 16.06 7.49 34.24 21.18 22.19 12.41 0.71 6.15 9.25 1.41 12.92 9.40 7.72 6.15 6.95 16.21 4.49 2.64 10.23 33 I10_SR1 SilentIntronRegion 0 7.34 11.91 13.58 14.26 15.98 4.51 26.59 21.91 22.53 12.82 1.49 6.66 7.47 1.09 12.31 9.84 8.75 9.02 5.70 11.65 4.25 2.07 8.96 34 ER11a ExonRegion 0 89.60 191.18 231.92 201.69 251.26 264.22 307.25 359.93 574.21 473.66 398.90 278.53 255.02 651.11 666.12 510.21 486.47 249.04 350.08 359.19 326.76 340.34 309.57 35 E11a_E12a KnownJunction 0 104.02 251.60 300.97 249.55 318.51 298.58 400.25 444.26 668.57 474.92 441.43 392.98 432.76 748.08 764.33 796.46 584.76 388.63 309.66 409.20 354.42 430.47 410.60 36 ER12a ExonRegion 0 82.13 171.53 280.19 213.00 240.10 273.02 367.24 380.57 683.23 498.99 501.44 385.90 309.17 722.43 719.58 598.26 575.86 360.47 360.22 354.08 386.97 342.45 345.71 37 E12_Da NovelBoundary 0 59.34 8.42 31.28 45.78 15.28 17.15 51.85 39.72 51.13 27.16 4.79 25.21 20.45 2.65 0.00 28.20 0.00 4.10 30.68 14.64 8.03 5.08 31.24 38 E12a_E13a KnownJunction 0 70.98 141.03 215.22 210.10 134.64 174.50 222.80 324.81 548.17 445.40 276.39 213.07 171.74 382.60 570.74 317.69 394.02 165.61 228.34 220.26 274.29 280.39 175.59 39 E12a_E14a NovelJunction 0 0.00 8.88 0.00 1.90 0.00 0.00 0.00 5.09 3.53 6.98 7.90 6.00 0.00 0.00 0.00 3.76 0.00 9.16 0.00 3.00 5.56 0.00 0.00 40 I12_SR1 SilentIntronRegion 0 13.14 18.22 15.65 24.92 23.58 7.37 32.96 26.25 32.85 16.36 1.16 6.44 10.79 0.80 19.97 11.01 10.60 2.59 4.44 13.21 2.22 4.18 15.25 41 E13_Aa NovelBoundary 0 6.45 0.00 21.76 11.82 8.66 2.73 11.61 48.14 41.87 33.15 8.63 6.15 6.82 7.30 0.00 11.54 15.33 8.75 21.27 20.90 15.07 2.27 7.85 42 ER13a ExonRegion 0 122.31 175.87 300.15 209.46 175.10 232.98 287.30 427.06 679.09 507.22 513.09 351.25 327.14 770.39 750.51 600.66 539.15 360.94 370.77 354.08 372.63 357.12 353.51 43 E13_Da NovelBoundary 0 14.67 6.58 17.24 19.51 15.11 2.61 30.78 47.03 47.28 28.72 4.42 0.00 0.00 6.83 19.41 10.77 11.59 16.87 9.04 29.34 14.39 0.00 32.44 44 E13a_E14a KnownJunction 0 156.62 246.01 252.24 215.42 278.10 234.69 330.20 397.56 599.65 486.26 474.23 277.74 300.14 734.30 580.51 564.47 506.68 351.98 374.03 264.55 317.16 300.23 297.83 45 I13_SR1 SilentIntronRegion 0 9.47 6.62 10.90 21.49 14.88 4.48 20.11 26.20 19.97 19.71 2.36 4.46 3.14 3.10 16.11 8.87 12.54 16.94 10.36 15.87 10.75 2.54 18.32 46 I13_AR3 ActiveIntronRegion 0 12.88 9.97 13.97 20.65 26.00 6.31 53.85 31.43 39.46 26.31 2.74 22.59 21.38 1.80 15.06 10.50 17.35 8.39 9.17 13.66 7.31 3.35 15.81 47 ER14a ExonRegion 0 107.12 195.99 277.21 236.74 303.18 234.52 364.95 381.89 612.31 462.78 474.96 354.35 282.90 685.22 664.79 606.27 491.38 442.13 418.21 280.47 322.41 381.11 321.44 48 E14a_E15a KnownJunction 0 84.90 255.09 366.93 307.19 381.07 358.88 445.87 389.05 666.34 487.09 515.13 470.25 323.19 802.35 745.29 678.11 561.38 429.87 462.32 325.59 350.83 374.93 317.72 49 E15_Aa NovelBoundary 0 6.00 9.08 11.32 33.96 19.44 5.45 28.97 23.66 15.34 27.75 0.00 20.26 20.94 0.00 4.82 8.29 8.98 8.79 0.00 22.82 14.09 8.14 24.67 50 ER15a ExonRegion 0 87.99 170.55 312.71 250.37 327.28 282.90 375.65 396.73 601.82 469.72 521.38 440.30 319.07 796.68 739.70 547.43 536.02 317.74 401.39 295.94 309.14 366.59 344.66 51 E15a_E16a KnownJunction 0 91.87 200.75 333.02 255.15 231.24 220.44 318.46 380.14 635.87 483.00 469.70 499.81 296.57 730.30 716.24 579.85 428.89 352.40 495.26 307.19 419.28 398.08 433.39 52 I15_SR1 SilentIntronRegion 0 6.14 7.44 8.82 21.16 8.98 0.62 21.15 14.51 21.46 9.66 9.09 10.68 9.35 6.71 16.26 14.31 11.62 10.52 7.25 10.83 9.66 4.66 12.83 53 I15_SR3 SilentIntronRegion 0 4.89 7.04 16.52 20.72 11.84 2.82 15.28 13.38 17.00 14.80 4.09 9.41 5.20 4.10 16.65 12.58 15.88 11.13 10.41 15.15 19.50 8.41 18.65 54 E16_Aa NovelBoundary 0 37.04 9.67 38.59 45.85 21.31 5.68 19.39 18.32 37.90 29.66 9.84 12.60 0.00 6.95 18.54 35.03 25.25 14.63 38.21 10.87 20.45 12.19 43.54 55 ER16a ExonRegion 0 83.47 145.36 299.50 233.95 211.73 202.97 263.24 363.26 541.46 435.09 494.72 420.70 222.44 630.23 680.26 478.74 433.91 328.08 387.06 255.83 284.69 316.86 298.94 56 E16a_E17a KnownJunction 0 74.75 125.11 258.09 212.66 179.20 146.56 251.51 293.93 454.34 374.48 410.16 327.26 120.45 632.29 732.06 360.85 382.14 274.71 223.91 221.92 257.12 241.93 251.14 57 ER17a ExonRegion 0 120.68 132.74 232.18 178.26 211.80 175.12 228.09 314.29 436.60 354.73 379.56 297.93 205.00 551.10 659.88 383.55 345.60 329.15 301.62 244.27 297.91 231.76 269.86 58 E17_Da KnownBoundary 1 176.62 117.35 38.70 90.86 152.04 99.26 141.28 66.54 124.54 94.88 68.86 143.90 118.17 94.53 255.52 128.17 71.25 122.25 181.28 103.48 65.36 77.22 141.45 59 E17a_E18a KnownJunction 0 61.64 94.33 159.52 90.76 125.38 132.03 151.96 227.80 314.35 222.58 273.23 135.34 73.86 356.11 499.04 212.00 297.24 229.98 221.65 126.30 231.17 114.57 133.68 60 ER17b ExonRegion 1 44.37 35.82 44.16 51.68 66.12 57.43 75.38 58.94 90.66 56.35 35.76 54.85 60.39 80.18 111.52 81.42 53.31 59.96 81.58 54.91 41.78 56.08 75.77 61 E17_Db NovelBoundary 0 96.46 41.64 45.86 63.20 85.14 86.48 158.06 55.74 93.11 75.00 30.85 49.82 43.34 97.06 115.58 68.87 65.36 28.85 47.25 74.14 30.52 53.58 40.80 62 I17 Intron 0 30.91 22.16 45.77 41.61 36.74 33.17 29.72 43.79 45.33 50.29 27.81 15.49 11.30 54.83 70.08 44.05 22.30 26.22 43.74 29.21 29.78 36.33 35.20 63 I17_SR3 SilentIntronRegion 0 31.55 22.56 46.74 42.49 37.48 33.81 30.36 44.72 46.27 51.33 28.34 15.82 11.55 55.92 71.40 45.01 22.79 26.74 44.60 29.81 30.41 37.04 35.86 64 E18_Aa NovelBoundary 0 77.27 64.73 64.99 47.05 75.72 54.12 74.99 62.23 90.07 67.96 17.06 18.76 25.00 65.40 115.58 35.12 7.57 76.07 37.74 46.92 71.54 28.41 55.32 65 ER18a ExonRegion 0 124.73 101.71 197.48 117.70 124.67 150.66 141.68 199.74 274.34 254.67 154.43 67.64 43.66 231.49 339.18 182.47 164.43 151.05 147.32 137.43 158.41 140.24 125.78