Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf101 Gene 0 20.13 22.56 86.50 71.03 28.74 37.53 45.05 60.78 47.91 84.10 68.28 21.63 17.81 68.70 100.42 43.23 46.74 65.67 68.89 55.00 108.79 66.27 61.44 2 313056 Transcript 0 5.06 8.68 38.59 40.00 13.75 19.24 24.72 32.63 13.11 50.31 21.01 6.30 7.47 35.05 72.46 45.21 14.88 37.52 36.29 17.87 63.20 53.38 36.79 3 329197 Transcript 0 17.15 9.81 46.67 34.92 39.91 30.46 41.75 39.37 30.57 52.27 41.89 13.27 14.85 28.13 68.72 45.40 29.75 32.56 57.94 32.44 53.02 52.64 54.64 4 ER1a ExonRegion 0 0.19 0.00 0.00 0.12 0.00 0.50 2.05 0.00 0.11 0.10 0.18 0.00 0.00 0.30 0.79 0.27 0.30 0.34 0.29 0.39 0.00 0.76 0.00 5 ER1b ExonRegion 0 7.70 9.72 11.34 5.83 0.21 11.57 15.71 7.89 6.70 19.71 16.04 1.32 0.00 18.59 26.73 6.94 11.88 12.19 15.46 8.38 29.36 15.73 15.02 6 E1_Da NovelBoundary 0 0.00 4.93 73.09 19.21 0.00 35.89 2.16 44.81 47.13 83.19 13.42 0.00 12.01 37.32 22.50 18.97 23.56 79.88 56.66 38.35 34.66 24.43 41.32 7 E1a_E2a KnownJunction 1 3.33 3.29 28.27 18.75 3.74 12.38 9.85 8.75 12.07 44.32 32.32 7.50 0.00 17.31 65.64 4.36 38.80 9.37 17.04 25.44 96.00 20.02 18.61 8 ER2a ExonRegion 0 7.30 22.05 53.43 41.44 12.08 31.58 39.21 46.95 32.42 74.27 49.06 7.76 3.92 69.06 94.24 23.13 32.13 48.49 37.16 59.94 105.06 47.91 43.48 9 E2_Da NovelBoundary 0 3.19 2.50 3.13 11.99 0.00 5.05 0.00 11.75 1.56 9.27 0.00 0.00 0.00 2.47 4.45 11.96 4.77 0.00 0.00 23.84 2.53 3.12 0.00 10 E2a_E3a KnownJunction 0 10.45 59.00 102.18 85.64 38.79 43.55 36.92 66.79 50.58 110.72 77.65 31.21 12.66 141.62 166.14 53.23 71.15 76.98 71.53 77.47 156.11 75.32 74.95 11 I2_AR1 ActiveIntronRegion 0 4.14 1.97 14.22 18.17 1.71 2.10 2.73 9.33 2.89 4.40 1.87 0.93 1.25 1.30 7.99 2.45 1.32 6.69 3.19 10.76 1.42 2.07 6.95 12 ER3a ExonRegion 0 22.86 45.49 132.32 105.37 33.20 41.04 49.86 100.98 72.61 131.94 100.82 23.81 31.29 126.66 133.53 52.79 80.35 104.59 102.64 95.49 166.55 97.68 90.11 13 E3a_E4a KnownJunction 0 64.75 39.80 135.86 113.14 34.63 62.07 70.84 114.93 68.84 119.83 131.24 24.61 12.82 123.14 203.97 69.55 108.46 114.25 124.14 107.89 180.39 105.63 102.18 14 ER4a ExonRegion 1 37.21 33.96 159.38 143.29 33.23 31.81 58.56 136.83 92.35 144.38 122.54 18.93 12.54 108.97 157.68 60.06 106.93 135.83 97.56 105.89 178.50 106.21 84.27 15 E4_Da NovelBoundary 0 0.00 9.34 14.78 27.34 23.01 10.39 3.97 9.41 3.50 7.20 2.21 6.30 0.00 0.00 6.30 8.46 0.00 8.12 4.05 21.35 0.00 8.94 4.35 16 E4a_E5a KnownJunction 1 40.90 42.30 176.55 177.33 47.28 34.64 70.04 148.40 102.98 165.01 114.61 6.00 20.13 100.24 213.73 56.31 107.71 136.71 94.87 93.96 184.03 133.61 94.33 17 ER5a ExonRegion 0 28.56 28.25 186.01 190.32 62.20 75.61 71.51 144.92 116.29 178.28 129.47 33.37 34.27 177.23 165.55 90.63 86.69 154.13 128.69 95.84 204.17 143.15 120.27 18 E5a_E6a KnownJunction 0 86.46 37.76 213.71 201.37 112.65 121.86 122.90 124.91 125.26 172.40 193.84 62.12 61.36 270.41 211.63 126.80 88.27 145.50 201.61 104.89 260.70 155.23 173.63 19 ER6a ExonRegion 0 51.24 33.64 191.27 160.94 72.10 69.49 81.74 120.32 104.96 161.71 163.92 69.04 62.95 162.16 178.05 91.15 135.39 128.18 181.79 103.10 222.65 136.82 139.46 20 E6a_E7a KnownJunction 0 63.72 32.82 220.19 171.34 59.42 60.08 78.92 115.95 104.54 168.77 154.14 78.93 45.78 106.83 173.44 92.63 118.00 133.44 161.60 117.03 224.68 110.96 141.36 21 ER7a ExonRegion 0 34.73 42.93 155.73 166.66 50.96 70.21 83.99 104.30 94.63 148.36 128.86 49.56 32.59 103.70 157.06 67.45 82.12 135.87 127.56 95.07 214.58 110.71 116.11 22 E7a_E8a KnownJunction 0 34.08 51.77 174.30 146.73 80.81 22.88 99.50 102.03 94.73 160.20 166.57 49.97 44.80 123.20 222.02 85.96 90.42 142.60 144.95 104.63 196.33 104.65 104.48 23 ER8a ExonRegion 0 26.13 33.82 161.79 105.12 51.57 61.27 77.08 85.04 71.48 130.90 111.59 37.25 36.08 111.21 183.69 69.27 68.25 95.19 111.41 85.83 180.78 109.28 99.87 24 E8_Da NovelBoundary 0 3.78 2.96 13.78 7.06 0.00 0.00 4.42 10.02 2.95 19.58 8.00 0.00 0.00 0.00 4.45 0.00 4.11 12.93 0.00 15.72 5.50 41.88 26.89 25 E8a_E9a KnownJunction 0 16.67 12.23 49.08 43.35 60.36 44.12 65.49 41.36 27.37 68.07 43.96 11.70 26.13 23.66 55.88 37.08 37.68 28.35 68.80 28.83 52.51 53.03 66.84 26 E8a_E10a KnownJunction 1 9.93 17.37 77.17 79.88 27.50 37.99 47.39 65.27 26.10 100.52 41.85 12.60 14.93 69.81 144.14 90.15 29.45 74.70 72.28 35.35 126.40 106.00 73.58 27 I8 Intron 0 2.27 4.36 10.57 9.51 6.26 4.89 8.48 11.89 6.76 12.50 8.29 4.23 1.96 8.43 8.18 4.25 6.97 11.25 9.32 15.98 7.81 22.21 14.70 28 I8_SR1 SilentIntronRegion 0 0.00 0.00 1.40 1.91 0.00 5.29 0.95 2.27 3.21 5.96 3.76 0.00 0.00 1.86 3.15 1.36 10.37 6.65 5.46 7.66 6.80 10.66 14.68 29 I8_AR1 ActiveIntronRegion 0 4.02 1.93 9.63 12.61 3.17 3.76 7.58 14.11 8.46 20.53 10.93 3.06 0.56 10.48 11.72 2.70 6.47 24.55 12.02 22.39 8.31 21.20 15.35 30 I8_SR2 SilentIntronRegion 0 1.00 2.42 12.52 7.65 4.20 3.27 4.08 8.50 5.69 9.02 7.32 5.98 2.02 8.68 7.52 4.89 6.62 6.36 9.06 13.90 10.08 30.37 18.82 31 I8_AR2 ActiveIntronRegion 0 2.70 12.45 11.93 13.74 13.34 7.79 18.73 21.82 8.80 13.76 8.47 3.34 4.12 7.79 6.67 5.46 9.04 8.26 6.83 16.53 3.66 14.12 9.23 32 E9_Aa NovelBoundary 0 7.11 3.22 24.48 8.62 36.08 5.39 11.75 25.55 10.01 15.61 4.74 0.00 0.00 14.89 15.70 15.55 13.37 12.06 4.80 12.59 0.00 2.69 11.44 33 ER9a ExonRegion 0 21.22 14.04 63.31 39.65 44.34 33.84 43.11 56.28 42.81 70.38 56.80 20.45 18.41 36.82 75.01 46.90 37.63 48.54 71.71 51.37 59.12 54.62 50.14 34 E9_Da NovelBoundary 0 10.45 23.02 28.09 8.29 16.04 22.32 22.66 33.97 11.40 22.70 7.48 0.00 0.00 4.65 14.59 7.69 7.95 8.75 51.58 27.68 8.59 13.04 3.24 35 E9a_E10a KnownJunction 1 13.56 3.16 27.62 21.78 15.03 13.40 16.65 20.45 21.53 18.37 24.90 7.65 0.00 23.90 75.28 52.21 13.93 20.77 33.32 17.13 47.45 50.27 46.95 36 E10_Aa NovelBoundary 0 12.22 5.85 16.17 7.52 0.00 13.74 21.24 20.00 10.01 23.77 4.53 0.00 0.00 19.01 14.09 15.55 4.02 10.45 9.04 8.88 5.62 19.96 6.91 37 ER10a ExonRegion 0 16.00 11.37 43.98 30.57 9.70 19.90 20.33 24.08 16.82 33.27 27.29 12.79 8.82 25.28 59.67 30.52 16.57 24.92 29.60 13.96 45.68 35.43 29.96