Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C17orf95 Gene 0 147.79 71.13 173.81 103.77 142.99 106.95 91.59 89.99 97.77 126.74 71.71 91.89 81.80 127.52 212.74 109.72 112.73 25.80 90.76 73.35 60.42 94.08 60.15 2 317409 Transcript 0 11.04 4.30 8.01 8.56 16.27 27.50 11.98 9.06 7.75 9.08 11.42 0.98 5.28 11.12 33.91 11.21 10.32 1.34 7.03 8.55 14.60 12.20 8.24 3 341249 Transcript 0 58.71 31.83 63.50 32.48 62.43 74.95 35.73 40.57 30.09 43.69 24.39 14.34 31.86 58.40 82.66 65.41 46.12 14.70 37.57 22.91 34.35 26.88 42.96 4 ER1a ExonRegion 0 19.05 2.22 5.24 4.34 8.27 22.34 8.18 0.79 3.93 6.36 15.99 1.97 3.41 7.53 29.01 10.81 11.10 2.69 4.92 5.03 13.02 6.82 12.55 5 ER1b ExonRegion 0 37.33 14.26 46.01 18.54 21.55 51.40 16.57 20.50 21.66 37.34 31.93 6.41 8.43 63.95 78.96 53.28 45.49 20.02 37.55 25.11 47.56 30.46 36.70 6 E1_Da NovelBoundary 0 13.04 9.67 63.89 13.92 18.76 59.68 14.71 31.01 27.03 51.49 24.37 5.70 6.82 34.02 53.53 59.30 30.57 34.99 22.97 29.79 34.84 40.41 15.88 7 E1a_E2a KnownJunction 0 6.00 9.01 34.18 12.22 11.21 47.25 18.86 17.09 9.17 31.67 2.32 0.00 13.64 17.01 43.39 21.79 22.35 9.95 13.18 12.46 6.24 20.64 8.71 8 E1a_E3a KnownJunction 0 3.04 6.38 10.79 12.79 24.28 32.65 15.77 17.33 11.57 11.79 6.84 0.00 7.14 14.72 38.82 11.62 9.54 0.00 9.13 12.08 16.19 17.57 3.93 9 I1 Intron 0 12.60 9.54 19.00 11.60 18.99 14.67 15.29 9.45 7.75 11.20 9.65 9.34 10.77 23.38 21.18 20.20 13.90 7.02 10.92 15.10 8.08 7.77 13.60 10 I1_AR1 ActiveIntronRegion 0 8.89 9.84 23.11 10.50 7.93 18.60 10.90 13.34 10.85 17.22 12.03 2.11 3.25 26.88 25.28 18.58 19.01 7.09 9.04 16.76 8.61 11.99 14.47 11 I1_SR1 SilentIntronRegion 0 14.18 9.45 17.36 12.10 23.64 13.08 17.16 7.87 6.49 8.75 8.69 12.37 13.92 22.01 19.56 20.94 11.82 7.01 11.73 14.46 7.89 6.04 13.28 12 E2_Aa NovelBoundary 0 56.53 14.67 24.36 21.98 38.71 24.30 37.58 22.80 11.55 7.47 4.74 24.16 0.00 34.02 13.35 38.11 30.39 4.19 17.32 15.08 0.00 3.06 31.24 13 ER2a ExonRegion 0 87.46 39.04 76.67 45.74 82.18 101.98 44.84 45.12 36.22 55.55 34.90 30.43 49.31 86.26 89.00 93.52 56.27 22.96 54.82 32.30 39.96 32.52 47.88 14 E2_Da NovelBoundary 0 52.23 22.89 37.67 16.75 26.91 21.18 30.74 2.51 11.98 16.33 4.32 31.81 34.58 29.20 39.56 33.92 17.39 19.57 30.02 15.53 0.00 2.63 11.69 15 E2a_E3a KnownJunction 0 82.68 47.43 79.65 39.49 93.89 75.64 43.50 59.52 44.88 43.84 35.96 12.60 32.63 71.93 115.58 80.92 59.75 11.19 44.71 23.97 56.84 27.49 72.30 16 I2 Intron 0 40.30 27.88 32.03 21.67 26.77 18.43 26.09 14.76 14.61 18.76 7.33 26.27 26.74 20.11 21.98 22.53 16.01 9.04 10.81 23.63 3.20 10.47 11.26 17 I2_SR1 SilentIntronRegion 0 8.69 12.23 13.70 8.55 13.03 10.20 15.85 6.27 4.43 6.96 1.38 14.58 19.65 13.38 11.03 15.18 8.16 9.19 6.73 12.31 3.29 7.60 11.38 18 I2_AR1 ActiveIntronRegion 0 31.10 22.30 40.91 28.08 33.41 17.34 30.28 16.51 19.64 22.69 11.75 31.24 29.12 26.56 26.36 28.24 22.89 11.71 13.48 23.74 3.36 9.61 11.66 19 I2_AR3 ActiveIntronRegion 0 93.36 55.70 41.92 28.64 34.23 30.38 32.78 22.81 19.92 27.75 8.24 33.62 32.21 19.09 29.27 23.39 15.70 4.98 12.01 37.68 2.89 15.38 10.59 20 E3_Aa NovelBoundary 1 150.77 103.07 88.47 37.99 43.21 70.02 83.91 23.99 21.61 40.88 9.95 55.37 75.32 16.48 50.68 21.96 19.45 14.67 62.87 51.07 11.37 21.31 16.05 21 ER3a ExonRegion 0 260.76 145.17 244.48 162.30 216.60 145.77 152.28 130.36 144.89 188.59 97.61 91.97 67.22 200.56 306.25 177.77 176.39 41.54 153.97 109.53 113.34 130.49 96.58 22 E3_Da NovelBoundary 0 78.75 44.40 76.70 52.04 64.09 47.87 39.22 44.11 37.96 42.95 26.27 49.52 13.80 37.50 38.82 32.81 11.22 5.14 38.59 56.50 3.15 16.23 16.65 23 E3a_E4a KnownJunction 0 242.93 85.58 300.67 179.80 408.57 214.99 233.93 166.68 197.86 221.64 114.82 74.72 92.20 212.37 402.25 175.42 157.83 37.72 160.85 80.09 96.13 130.49 56.43 24 I3 Intron 0 43.46 26.94 3.63 2.69 19.49 19.43 22.80 6.82 0.00 1.13 3.84 9.45 10.23 12.78 28.03 17.72 8.75 3.05 16.88 14.09 1.46 8.28 7.78 25 I3_AR1 ActiveIntronRegion 0 44.62 27.66 3.68 2.73 20.01 19.95 23.41 6.91 0.00 1.15 3.94 9.70 10.51 13.10 28.78 18.15 8.93 3.10 17.33 14.44 1.50 8.50 7.99 26 E4_Aa NovelBoundary 0 137.21 55.58 69.99 70.49 89.05 45.43 50.70 39.23 31.16 45.53 12.16 42.76 13.31 51.15 82.45 28.80 25.25 1.99 40.00 54.84 8.96 21.86 32.78 27 ER4a ExonRegion 0 264.37 111.68 279.34 175.07 310.39 198.20 162.10 162.92 185.79 218.56 121.00 162.64 147.60 205.80 391.70 182.38 165.86 37.28 159.01 110.19 67.98 179.75 101.61 28 E4_Da NovelBoundary 0 51.34 34.27 23.06 32.56 26.99 5.68 46.86 38.16 33.65 34.87 9.63 29.26 13.31 13.83 29.05 22.81 25.62 4.23 12.80 17.51 2.84 17.82 13.06 29 E4a_E5a KnownJunction 0 255.90 130.77 333.81 214.86 220.03 126.29 160.40 160.93 190.07 246.89 122.61 219.97 143.01 216.44 330.18 143.04 181.77 29.18 148.90 107.06 41.64 173.23 65.73 30 I4 Intron 0 47.43 21.21 4.94 13.34 28.95 8.50 16.37 8.96 6.40 6.60 3.73 16.83 18.23 8.90 14.97 3.44 7.65 1.43 9.85 16.44 0.85 8.85 3.40 31 I4_AR1 ActiveIntronRegion 0 48.04 21.49 5.01 13.54 29.35 8.63 16.62 9.09 6.49 6.70 3.79 17.08 18.51 9.03 15.20 3.50 7.77 1.45 10.00 16.69 0.86 8.98 3.46 32 E5_Aa NovelBoundary 0 32.30 17.69 13.90 15.98 28.69 4.32 33.87 24.89 25.49 20.58 10.32 19.51 40.58 16.78 28.56 15.72 17.86 0.00 0.00 14.89 0.00 8.08 4.35 33 ER5a ExonRegion 0 162.27 73.06 245.92 141.69 181.33 111.61 115.68 121.83 132.28 165.69 89.69 169.62 151.15 131.21 265.71 103.91 135.65 19.18 91.78 96.40 42.10 125.28 51.49 34 IG6_SR1 SilentIntergenicRegion 0 4.54 1.79 5.91 7.58 6.69 5.34 9.07 7.88 10.35 8.43 1.31 19.86 16.69 2.29 6.66 5.68 12.33 0.00 1.78 13.33 0.00 2.57 2.68 35 IG6_SR2 SilentIntergenicRegion 0 6.94 11.88 6.99 11.03 3.46 5.15 14.02 5.05 5.59 4.92 1.48 14.63 8.99 0.01 3.32 0.35 5.94 1.58 0.70 15.32 0.94 3.94 2.49