Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 B3GNTL1 Gene 0 25.69 29.50 48.93 25.26 16.24 32.58 18.72 23.36 34.20 37.19 10.73 5.79 6.64 19.36 24.95 16.50 15.76 22.03 37.84 32.21 29.27 17.50 19.89 2 320865 Transcript 0 29.79 27.49 48.29 23.93 14.70 24.68 16.79 19.87 27.16 30.03 12.81 6.41 6.73 19.42 30.34 18.00 18.60 18.43 38.05 28.27 32.23 20.63 21.20 3 ER1a ExonRegion 0 36.15 32.32 15.13 10.00 12.37 19.01 21.17 5.02 5.19 13.69 11.94 0.00 1.33 7.20 16.94 12.25 13.52 15.51 42.10 15.99 17.54 16.56 13.77 4 E1a_E2a KnownJunction 0 157.88 94.85 51.00 33.43 42.44 62.24 67.30 15.77 13.40 36.24 30.17 0.00 6.82 22.13 57.48 47.68 55.91 35.19 126.03 49.28 66.97 52.78 37.39 5 E2_Aa NovelBoundary 0 10.74 0.00 0.00 1.60 0.00 0.00 3.89 1.64 1.24 0.00 0.00 0.00 0.00 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.82 0.00 6 ER2a ExonRegion 0 37.34 22.93 29.28 20.14 10.13 11.88 14.11 16.78 14.82 22.86 15.74 3.11 0.92 12.23 20.80 11.91 16.17 9.90 22.27 21.42 31.49 11.24 11.77 7 E2a_E3a KnownJunction 1 7.33 3.35 51.98 19.94 7.72 2.61 3.36 21.07 17.27 32.88 28.85 0.00 0.00 7.18 34.86 0.00 41.42 2.28 11.29 35.03 52.39 14.57 0.00 8 E3_Aa NovelBoundary 0 40.23 2.63 1.71 4.13 0.00 2.21 1.63 1.81 3.56 0.00 0.00 0.00 0.00 2.12 4.45 7.69 0.00 0.00 0.00 0.00 0.00 2.94 0.00 9 ER3a ExonRegion 0 24.66 10.37 68.07 38.27 10.78 12.52 15.32 28.16 25.46 30.20 23.56 10.39 11.82 32.17 55.97 46.10 34.89 27.35 77.02 42.45 38.50 37.80 27.78 10 E3a_E4a KnownJunction 0 27.71 17.50 78.50 51.44 28.44 13.51 15.10 31.09 37.21 27.08 11.85 24.01 15.26 18.89 47.72 34.35 22.07 30.55 33.22 50.05 26.13 27.74 27.32 11 ER4a ExonRegion 0 18.30 36.57 61.53 38.10 37.05 33.23 38.50 26.19 36.73 29.77 21.77 14.72 11.54 26.74 50.04 31.00 36.51 20.30 45.38 40.92 44.62 36.09 24.13 12 E4a_E5a KnownJunction 0 10.89 44.01 64.04 31.10 25.98 23.91 44.91 21.73 32.12 33.01 26.27 6.15 0.00 24.66 54.52 18.97 25.06 13.80 63.06 28.57 34.53 38.21 11.10 13 ER5a ExonRegion 0 25.24 50.38 53.38 21.89 6.32 20.73 17.75 11.47 25.68 29.78 14.56 6.76 7.60 28.91 35.47 22.25 21.96 11.45 30.79 30.72 35.79 26.26 6.67 14 E5a_E6a KnownJunction 0 47.12 62.09 61.35 28.90 0.00 32.82 8.17 8.26 28.15 35.11 12.48 0.00 6.82 27.19 23.73 35.72 16.18 18.61 27.48 28.57 43.68 23.64 8.11 15 I5_AR2 ActiveIntronRegion 0 5.85 4.92 7.94 4.03 5.05 3.49 9.04 10.14 6.68 8.63 7.60 0.00 6.79 9.72 16.90 10.32 3.04 3.48 0.00 4.61 3.15 6.14 8.58 16 E6_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 7.81 2.38 3.97 0.00 4.28 1.67 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.57 4.71 2.56 11.24 2.39 4.27 17 ER6a ExonRegion 0 50.75 33.49 54.49 28.59 14.69 19.69 13.28 14.15 29.60 30.18 9.56 14.75 9.92 22.35 34.48 24.06 21.66 27.74 41.77 26.48 43.16 19.79 22.02 18 E6a_E7a KnownJunction 0 64.97 42.16 54.29 37.56 24.28 15.16 14.44 25.67 31.57 41.50 20.11 12.60 0.00 17.36 57.23 26.75 16.36 20.52 41.51 21.03 34.84 32.03 27.23 19 E7_Aa NovelBoundary 0 3.11 0.00 4.58 2.06 0.00 0.00 10.38 4.76 0.00 1.40 0.00 0.00 0.00 0.00 0.00 3.85 0.00 2.57 0.00 0.00 0.00 3.12 10.50 20 ER7a ExonRegion 0 33.36 14.04 45.85 17.31 10.17 25.33 7.38 20.29 22.17 28.34 9.46 8.48 11.09 20.20 27.68 17.74 11.62 12.88 29.93 27.99 39.92 21.07 19.82 21 E7a_E8a KnownJunction 0 13.11 8.35 35.63 5.43 12.39 20.27 11.22 14.29 9.55 14.59 7.05 5.55 6.49 11.95 9.64 8.63 8.79 15.09 11.11 5.37 19.15 5.45 19.89 22 I7_AR1 ActiveIntronRegion 0 0.00 0.00 4.82 1.68 0.00 0.00 1.32 2.77 2.47 2.45 0.00 0.00 0.00 0.00 0.00 2.97 2.20 0.00 7.11 2.98 8.15 0.00 0.00 23 ER8a ExonRegion 0 15.07 19.51 39.69 9.81 7.39 11.38 3.37 18.25 25.46 19.84 5.12 6.48 13.28 15.63 15.71 12.86 7.31 16.45 18.22 15.46 27.96 12.35 19.66 24 E8a_E9a KnownJunction 0 18.00 32.82 33.94 18.98 3.74 13.12 6.54 5.38 23.47 15.90 2.53 12.60 0.00 21.37 42.15 4.02 13.46 6.30 40.47 36.30 17.11 26.15 32.18 25 ER9a ExonRegion 0 10.08 7.91 35.12 11.18 4.07 13.12 4.61 9.01 25.23 17.05 8.36 2.29 5.55 16.47 22.70 10.51 13.98 5.99 18.48 18.54 28.15 11.57 19.76 26 E9a_E10a KnownJunction 0 10.74 8.55 42.70 21.44 3.74 16.13 2.25 19.22 34.72 26.57 2.37 0.00 0.00 7.71 9.52 11.36 4.77 8.66 12.61 20.58 21.00 10.78 28.08 27 ER10a ExonRegion 0 12.27 10.96 54.09 19.30 7.76 20.57 10.25 26.60 34.15 27.61 12.38 4.45 11.15 26.01 23.25 12.66 12.96 20.70 45.01 29.66 29.00 16.12 39.16 28 E10_Da NovelBoundary 0 0.00 0.00 4.44 1.80 4.33 5.34 0.00 0.00 1.79 1.67 0.00 7.05 0.00 0.00 0.00 14.78 0.00 2.57 3.48 0.00 0.00 5.51 0.00 29 E10a_E11a KnownJunction 0 42.30 6.71 64.40 18.71 19.86 41.23 12.81 40.09 35.97 30.25 12.90 6.30 34.74 30.08 38.69 27.69 26.55 33.66 59.58 37.46 51.09 27.37 42.00 30 E11_Aa NovelBoundary 0 18.08 5.13 18.42 6.99 4.24 10.90 1.72 11.09 8.48 12.57 0.00 0.00 0.00 6.59 9.15 3.33 10.66 8.08 7.53 7.48 12.05 2.39 6.66 31 ER11a ExonRegion 0 11.94 16.84 37.09 9.74 12.24 26.38 11.26 13.83 20.96 22.43 5.52 3.17 12.57 25.44 23.33 10.42 17.74 16.43 22.09 11.97 24.21 10.47 21.07 32 E11_Da NovelBoundary 0 3.78 0.00 2.54 6.09 0.00 7.67 1.94 4.60 10.50 1.13 2.68 0.00 0.00 5.24 20.15 4.36 3.93 6.63 3.76 9.08 17.61 2.88 7.00 33 E11a_E12a KnownJunction 0 3.33 6.25 21.05 6.16 0.00 5.22 8.08 5.83 13.02 16.68 7.32 0.00 0.00 14.07 6.30 0.00 4.77 6.80 4.80 3.26 12.54 2.82 8.02 34 I11 Intron 0 13.75 27.95 32.77 29.81 18.46 26.29 15.10 32.21 33.11 28.50 3.18 3.98 11.04 7.88 5.23 8.95 6.64 28.87 30.11 34.68 12.82 12.18 11.86 35 I11_SR1 SilentIntronRegion 0 5.93 12.18 13.46 10.63 6.57 13.13 6.90 17.07 16.99 13.79 2.42 3.24 5.76 7.21 4.14 4.95 4.08 16.00 18.99 22.90 10.74 9.02 8.56 36 I11_AR1 ActiveIntronRegion 0 17.31 35.16 41.58 38.57 23.89 32.31 18.85 39.12 40.47 35.22 3.53 4.32 13.45 8.20 5.73 10.78 7.81 34.75 35.19 40.06 13.78 13.63 13.37 37 E12_Aa NovelBoundary 0 26.23 45.78 44.50 35.49 31.07 42.70 32.72 73.69 36.11 24.36 2.68 0.00 6.82 7.53 8.90 7.43 8.42 27.36 33.51 43.14 12.17 12.12 11.01 38 ER12a ExonRegion 0 15.54 26.96 52.60 28.97 27.17 26.67 17.59 26.91 32.62 53.10 10.42 2.10 0.00 19.58 13.54 8.61 6.38 26.45 34.95 29.02 26.15 17.07 18.29 39 E12_Da NovelBoundary 0 3.78 23.94 44.35 37.99 3.90 10.90 6.58 26.25 35.18 40.21 2.68 6.30 6.82 2.47 13.35 8.20 4.77 27.15 13.37 35.35 3.15 2.69 3.33 40 E12a_E13a KnownJunction 0 17.86 15.59 34.65 25.77 6.54 37.36 7.91 24.15 28.07 33.07 4.53 12.15 0.00 14.83 22.25 3.85 4.77 14.67 38.50 17.26 22.61 6.06 25.69 41 I12 Intron 0 34.75 63.02 74.15 51.10 55.89 92.36 44.70 37.53 76.88 61.26 3.66 6.04 10.32 8.19 3.59 4.76 8.18 37.08 44.87 54.15 5.14 5.87 5.42 42 I12_SR1 SilentIntronRegion 0 10.13 34.24 25.01 20.44 27.38 23.31 19.23 20.40 21.56 18.05 1.28 1.89 8.83 3.30 2.03 2.45 3.81 4.42 19.98 30.55 3.27 6.19 1.94 43 I12_AR1 ActiveIntronRegion 0 46.38 75.90 96.81 65.62 74.91 122.10 56.55 45.72 98.03 79.80 4.92 7.41 12.90 10.50 4.19 5.54 10.53 48.21 57.56 59.96 7.21 6.23 8.48 44 I12_SR2 SilentIntronRegion 0 43.18 71.68 102.16 59.69 45.86 119.11 48.40 45.52 104.78 86.16 5.20 15.19 4.18 9.59 5.67 9.69 7.36 39.71 46.90 71.19 0.27 4.90 1.45 45 I12_AR2 ActiveIntronRegion 0 40.84 74.15 83.20 59.63 49.72 120.06 54.42 40.50 107.16 74.85 3.34 5.64 6.22 9.54 3.80 4.63 9.24 67.55 50.57 78.41 3.37 4.17 2.94 46 E13_Aa NovelBoundary 0 39.56 56.31 94.67 49.78 55.09 85.29 31.05 33.76 97.45 86.52 7.26 0.00 6.49 4.77 0.00 4.10 12.81 49.12 65.60 116.46 8.34 5.08 8.02 47 ER13a ExonRegion 0 32.82 62.66 67.49 46.09 32.31 92.86 43.07 47.50 76.54 82.93 5.37 4.14 1.44 15.01 14.60 10.74 10.27 43.41 53.67 63.32 17.25 11.78 19.13 48 IG32 Intergenic 0 18.60 45.03 61.78 45.30 31.51 73.61 29.87 45.50 78.91 71.43 2.72 2.72 2.70 7.96 3.67 4.19 9.31 68.40 48.09 68.28 5.30 8.29 15.10 49 IG32_AR1 ActiveIntergenicRegion 0 18.67 45.17 61.97 45.45 31.61 73.84 29.96 45.64 79.16 71.66 2.73 2.73 2.71 7.99 3.68 4.20 9.34 68.61 48.24 68.50 5.32 8.32 15.15