Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GAA Gene 0 42.02 31.32 254.68 135.87 70.65 174.78 35.42 202.96 239.55 221.14 67.98 48.56 45.13 50.77 67.27 50.73 28.15 63.32 152.86 95.09 395.47 116.71 141.83 2 390015 Transcript 0 14.08 31.97 56.24 37.06 25.55 214.99 34.01 61.82 47.66 74.30 25.37 6.30 0.00 12.13 30.41 39.99 13.74 13.35 38.87 88.53 96.62 48.07 79.22 3 414495 Transcript 0 47.71 9.21 29.83 2.06 40.83 138.33 8.61 27.68 17.19 21.81 16.21 0.00 0.00 0.00 22.25 7.60 7.76 17.70 32.66 5.75 92.79 14.76 56.60 4 302262 Transcript 0 0.42 0.57 7.15 3.37 2.27 8.75 0.72 9.14 11.76 5.61 1.67 1.51 0.00 1.62 1.65 2.17 1.46 4.53 8.82 7.60 6.97 0.55 1.15 5 ER1a ExonRegion 0 15.96 7.93 20.11 8.31 11.12 94.78 11.58 14.69 11.87 22.64 11.87 1.86 2.81 6.64 14.80 12.19 5.99 9.63 19.89 23.13 58.46 21.04 42.33 6 E1_Da KnownBoundary 0 3.56 2.50 0.00 3.40 0.00 2.90 1.68 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 2.35 0.00 0.00 7 E1a_E1b KnownJunction 0 14.08 31.97 56.24 37.06 25.55 214.99 34.01 61.82 47.66 74.30 25.37 6.30 0.00 12.13 30.41 39.99 13.74 13.35 38.87 88.53 96.62 48.07 79.22 8 E1a_E2a KnownJunction 1 47.71 9.21 29.83 2.06 40.83 138.33 8.61 27.68 17.19 21.81 16.21 0.00 0.00 0.00 22.25 7.60 7.76 17.70 32.66 5.75 92.79 14.76 56.60 9 ER1b ExonRegion 0 0.42 0.57 7.15 3.37 2.27 8.75 0.72 9.14 11.76 5.61 1.67 1.51 0.00 1.62 1.65 2.17 1.46 4.53 8.82 7.60 6.97 0.55 1.15 10 E1_Ab KnownBoundary 0 0.00 0.00 11.50 8.92 0.00 0.00 2.03 14.87 24.57 14.13 0.00 5.40 0.00 2.30 10.26 4.36 4.77 11.19 17.79 16.30 21.75 3.12 0.00 11 ER1c ExonRegion 0 4.29 9.65 51.57 20.50 9.65 67.99 14.09 49.53 48.92 54.86 18.74 3.34 2.49 8.96 16.86 18.47 5.98 14.20 62.70 52.01 61.48 26.08 26.50 12 E1b_E2a KnownJunction 0 3.70 9.27 40.42 9.02 4.07 7.61 4.37 37.83 36.69 25.95 14.53 13.95 6.17 7.48 10.26 4.36 0.00 15.46 93.46 15.21 41.82 12.00 7.26 13 ER2a ExonRegion 0 11.00 13.40 167.98 65.97 21.73 106.35 16.23 167.15 199.40 217.47 71.95 64.90 75.46 51.36 74.69 46.49 28.46 60.12 162.39 94.01 369.20 113.65 142.53 14 E2a_E3a KnownJunction 0 6.67 18.42 217.56 103.02 44.57 133.39 9.76 222.91 232.12 242.83 68.86 57.62 87.66 66.87 67.50 66.82 25.81 68.77 184.66 121.19 410.70 87.81 179.95 15 ER3a ExonRegion 0 9.80 14.85 218.10 97.97 30.06 121.71 22.24 151.51 208.51 221.58 76.79 81.61 80.85 60.24 57.37 56.98 37.73 57.81 141.31 102.77 420.06 94.74 159.87 16 E3a_E4a KnownJunction 0 13.34 24.47 223.77 116.54 31.07 134.35 39.61 159.61 206.80 220.75 45.01 67.22 51.78 52.86 53.03 46.57 34.41 66.66 138.17 103.87 381.85 91.36 117.80 17 ER4a ExonRegion 0 11.02 32.24 234.72 120.68 62.64 171.91 32.07 186.35 245.33 252.94 86.65 78.87 53.79 63.62 74.44 62.09 30.30 96.16 196.17 115.06 518.50 108.53 149.27 18 E4a_E5a KnownJunction 0 6.82 15.26 252.36 140.31 43.12 254.91 27.78 203.44 249.48 268.38 92.13 48.92 27.11 50.80 81.22 57.42 22.35 99.90 164.71 87.44 509.05 154.98 178.75 19 ER5a ExonRegion 0 7.24 22.41 223.40 119.39 46.29 236.82 26.08 202.57 261.96 233.79 74.23 68.16 49.22 56.66 62.60 70.60 32.60 116.01 163.18 91.05 513.42 141.64 159.67 20 E5a_E6a KnownJunction 0 17.34 12.23 289.73 153.16 56.03 296.08 23.32 219.13 287.44 293.04 93.34 82.53 55.35 76.81 86.90 119.28 49.56 137.71 296.86 143.62 630.25 221.18 230.65 21 ER6a ExonRegion 0 13.86 28.17 255.39 113.95 47.12 164.17 35.46 201.41 298.31 289.83 92.71 57.58 31.93 73.11 83.44 70.89 45.00 86.46 225.07 117.55 586.92 183.47 175.88 22 E6a_E7a KnownJunction 0 28.38 22.23 257.56 100.19 94.48 206.24 36.66 191.16 327.46 310.44 76.60 69.77 25.97 56.92 42.65 62.63 47.97 86.02 177.98 136.40 603.32 188.29 138.20 23 ER7a ExonRegion 0 25.01 32.95 282.09 120.04 77.48 206.34 31.69 213.49 307.25 273.99 88.64 53.05 65.98 65.01 67.63 66.26 45.52 100.82 220.16 119.31 542.52 172.65 176.82 24 E7a_E8a KnownJunction 0 39.27 35.59 291.74 157.56 86.42 254.74 30.78 233.63 320.66 270.53 55.12 62.12 30.68 45.50 32.76 69.38 24.50 79.26 184.48 76.51 471.42 169.43 124.46 25 ER8a ExonRegion 0 18.90 46.02 246.65 129.74 57.41 219.81 38.65 207.30 268.31 254.40 70.52 66.45 56.28 57.15 75.65 54.47 35.08 66.39 172.95 86.59 486.10 172.00 169.44 26 E8a_E9a KnownJunction 0 20.82 45.52 271.01 102.42 43.21 196.48 42.57 224.96 261.48 236.44 78.18 59.12 40.58 61.33 48.46 49.99 22.25 52.48 132.62 84.50 539.87 125.59 135.47 27 I8 Intron 0 1.19 2.85 46.69 11.66 15.73 44.84 5.56 19.71 19.93 16.27 2.89 2.34 3.45 1.59 0.81 2.50 2.00 12.00 15.46 18.57 6.99 3.69 10.14 28 I8_SR1 SilentIntronRegion 0 1.19 2.85 46.78 11.68 15.76 44.92 5.57 19.75 19.96 16.30 2.89 2.35 3.46 1.59 0.81 2.50 2.01 12.02 15.49 18.60 7.01 3.70 10.16 29 ER9a ExonRegion 0 13.37 27.21 262.53 125.74 74.41 198.74 40.35 198.97 238.73 249.66 85.90 67.59 72.29 71.80 68.09 60.19 21.41 59.69 210.58 87.64 509.10 158.31 160.72 30 E9_Da NovelBoundary 0 17.04 5.53 76.61 37.22 15.45 81.94 7.20 75.12 121.09 38.82 15.21 13.35 0.00 9.48 14.71 0.00 0.00 43.19 44.61 45.19 54.92 46.48 11.44 31 E9a_E10a KnownJunction 0 35.04 28.61 391.06 182.49 76.49 118.80 38.95 277.82 315.04 320.92 92.39 73.67 121.10 56.57 93.58 86.30 28.24 101.81 277.18 112.94 597.33 254.24 290.49 32 I9 Intron 0 5.79 6.49 66.90 37.97 21.15 84.47 8.55 79.49 90.65 56.38 10.43 4.12 1.82 7.14 5.06 9.94 4.01 27.37 23.73 29.11 19.42 7.13 8.04 33 I9_SR1 SilentIntronRegion 0 2.86 5.70 22.71 18.33 9.86 41.89 2.47 23.38 29.55 22.40 4.81 1.70 0.00 2.99 0.57 9.91 5.31 10.76 13.99 13.02 8.30 1.47 3.74 34 I9_AR1 ActiveIntronRegion 0 6.35 7.07 72.84 38.84 24.20 81.51 9.26 82.00 101.06 59.66 10.61 5.01 2.10 6.68 4.80 10.80 3.29 31.60 24.81 30.21 19.78 5.51 7.46 35 I9_AR2 ActiveIntronRegion 0 4.72 8.76 88.75 48.02 24.80 96.49 16.86 107.56 107.22 58.67 9.89 4.33 4.69 14.30 10.94 12.57 9.01 38.09 18.74 27.99 17.29 6.57 10.73 36 I9_AR3 ActiveIntronRegion 0 5.10 9.21 95.87 61.17 19.99 134.41 13.24 119.98 116.03 68.81 11.82 8.40 3.03 16.53 10.41 13.99 5.05 37.39 25.86 37.55 26.70 21.20 6.91 37 I9_SR2 SilentIntronRegion 0 5.65 4.82 60.66 38.31 17.26 97.93 7.01 82.53 80.38 57.87 11.74 2.38 1.14 7.44 5.45 7.28 4.39 20.09 24.91 30.98 21.77 11.22 10.41 38 E10_Aa NovelBoundary 0 13.56 11.31 149.17 89.67 49.75 103.86 9.45 176.17 157.55 143.12 11.63 0.00 5.68 7.18 10.26 10.77 12.53 35.32 78.78 41.80 46.95 19.78 21.00 39 ER10a ExonRegion 0 18.86 23.14 305.06 153.62 75.93 179.62 34.12 249.53 318.74 300.19 113.82 108.58 94.58 90.79 92.81 87.21 36.05 78.93 256.48 129.19 574.07 188.25 243.35 40 E10a_E11a KnownJunction 0 14.37 41.37 329.65 202.87 100.93 208.97 58.69 353.24 379.25 366.18 146.51 73.07 60.71 72.81 109.28 35.20 65.08 76.69 160.95 150.97 792.42 156.15 180.46 41 ER11a ExonRegion 0 20.12 41.22 269.70 141.95 81.72 257.57 46.90 259.13 321.71 294.67 104.60 86.49 93.80 66.44 91.78 41.78 48.43 79.93 182.35 109.69 613.43 143.86 174.85 42 E11_Da NovelBoundary 0 9.56 11.77 74.10 32.16 28.18 126.92 12.06 56.89 88.60 51.74 14.69 25.51 6.17 22.37 0.00 4.27 12.34 24.75 41.88 18.28 19.34 5.76 19.63 43 E11a_E12a KnownJunction 1 14.82 42.43 245.50 88.90 38.46 95.80 26.85 197.03 302.25 230.80 53.75 93.03 68.18 69.81 38.07 36.83 17.48 36.52 100.05 57.53 400.75 96.93 120.87 44 I11 Intron 0 7.65 10.07 50.21 34.20 25.20 70.67 11.34 43.38 46.76 41.14 6.99 8.72 3.75 7.66 6.41 8.20 3.45 14.68 23.94 22.88 22.01 9.52 13.41 45 I11_SR1 SilentIntronRegion 0 4.22 4.49 37.24 22.41 20.30 58.16 5.49 30.38 34.30 26.40 7.55 9.80 6.82 8.33 7.87 7.32 4.03 8.70 28.09 19.80 18.27 6.61 14.33 46 I11_AR1 ActiveIntronRegion 0 9.91 13.72 58.86 42.00 28.51 79.14 15.17 51.99 55.05 50.88 6.67 8.07 1.80 7.27 5.52 8.82 3.11 18.61 21.43 25.00 24.55 11.44 12.90 47 E12_Aa NovelBoundary 0 30.30 11.97 80.04 59.87 3.90 90.91 24.11 63.46 58.88 53.97 6.90 0.00 0.00 2.47 8.90 0.00 0.00 9.87 17.41 42.63 30.77 11.82 14.51 48 ER12a ExonRegion 0 36.72 45.32 271.70 127.83 87.66 184.72 41.32 225.20 292.08 257.70 87.62 59.81 68.32 58.17 75.56 61.58 38.46 56.28 170.12 119.31 544.86 138.52 172.86 49 E12_Da NovelBoundary 0 9.48 0.00 86.54 34.36 12.14 53.15 9.01 68.80 63.98 62.75 7.90 6.30 0.00 11.60 17.80 0.00 0.00 15.01 16.94 17.26 18.84 20.57 12.46 50 E12a_E13a KnownJunction 0 33.19 27.23 283.55 137.68 66.98 195.46 39.61 215.52 260.67 183.47 77.55 90.63 73.05 40.91 104.09 44.18 9.44 53.77 170.64 46.66 485.08 131.10 108.33 51 I12 Intron 0 5.52 5.97 79.42 41.96 25.03 48.65 10.65 51.53 51.24 44.05 5.68 5.04 4.56 8.87 6.40 5.17 1.79 10.09 19.40 17.12 19.40 7.25 9.90 52 I12_AR1 ActiveIntronRegion 0 4.22 5.55 82.81 38.15 21.18 48.84 10.24 53.97 45.51 48.04 5.56 5.74 4.14 9.09 4.71 4.65 1.41 10.30 17.30 17.60 15.99 7.39 7.78 53 I12_AR2 ActiveIntronRegion 0 2.12 5.50 65.39 36.61 35.54 45.79 11.42 45.29 40.12 27.94 7.40 5.82 5.13 10.99 4.35 2.23 3.46 10.22 19.91 18.12 27.51 5.24 10.78 54 I12_AR4 ActiveIntronRegion 0 9.24 7.44 91.46 53.38 28.65 57.04 12.47 58.28 68.48 51.29 5.94 3.76 4.85 8.84 10.10 7.22 1.92 11.04 24.97 18.55 22.34 8.89 13.49 55 E13_Aa NovelBoundary 0 16.52 5.72 106.44 93.46 17.57 44.92 16.21 92.29 91.75 62.51 7.00 0.00 0.00 4.59 4.45 15.04 4.11 30.43 39.34 29.02 26.19 9.19 12.80 56 ER13a ExonRegion 0 30.82 24.55 273.48 118.59 58.37 179.19 28.04 173.10 240.22 201.38 60.60 54.41 64.89 52.30 52.59 47.84 21.26 57.35 128.41 98.76 381.37 109.28 122.88 57 E13a_E14a KnownJunction 1 33.27 33.88 381.68 176.30 37.10 211.36 41.16 190.54 294.09 230.99 89.02 47.27 75.64 58.57 81.59 128.09 21.22 79.92 198.03 104.70 471.67 125.96 194.88 58 E14_Aa NovelBoundary 0 3.41 3.29 63.21 32.23 34.30 41.68 12.59 86.75 47.95 64.58 4.84 11.25 6.82 2.12 4.45 12.39 4.58 10.86 4.42 8.63 14.52 11.33 3.33 59 ER14a ExonRegion 0 29.62 35.19 326.31 169.46 55.08 187.35 42.86 237.12 269.39 244.17 72.65 34.64 39.16 62.40 69.34 53.44 27.02 66.15 184.67 94.36 371.63 137.29 163.64 60 E14a_E15a KnownJunction 0 38.15 20.06 310.99 132.88 68.76 180.63 38.51 167.34 234.26 166.54 40.59 12.15 32.47 45.32 14.22 36.49 8.79 40.04 136.38 85.78 348.30 69.56 69.91 61 ER15a ExonRegion 0 43.86 35.66 391.93 170.04 70.11 203.97 39.14 233.61 286.35 243.27 65.34 46.87 34.91 57.74 67.66 73.64 26.92 84.23 194.26 91.83 400.02 126.02 149.24 62 E15a_E16a KnownJunction 0 53.79 26.57 553.94 232.11 76.40 185.23 49.95 281.81 305.26 251.88 67.28 48.62 13.31 42.73 102.48 55.46 21.41 74.16 163.39 72.42 477.97 136.12 164.15 63 I15_AR1 ActiveIntronRegion 0 8.47 6.61 45.65 22.32 27.09 15.82 19.69 26.79 16.06 18.49 3.87 6.49 9.38 4.87 5.44 2.60 0.00 8.55 6.37 5.05 7.99 6.25 2.94 64 E16_Aa NovelBoundary 0 25.93 0.00 35.30 16.12 15.87 22.60 2.08 21.03 10.39 14.96 0.00 0.00 0.00 0.00 0.00 25.04 0.00 5.14 11.58 2.75 5.81 8.63 7.94 65 ER16a ExonRegion 0 47.99 35.24 393.76 162.32 57.68 204.53 44.71 239.52 213.52 241.03 60.12 37.90 12.39 53.04 71.57 39.08 21.57 59.77 142.53 97.62 430.31 111.35 110.68 66 E16a_E17a KnownJunction 0 98.02 65.58 506.10 199.84 103.06 283.47 49.15 231.16 242.07 304.88 38.54 17.41 20.29 31.08 29.54 41.01 25.43 56.79 151.72 81.17 450.05 106.18 128.81 67 ER17a ExonRegion 0 59.14 40.79 363.28 160.55 85.11 194.02 48.35 216.09 201.91 222.50 39.64 25.57 9.97 43.18 72.05 39.87 17.19 51.13 120.00 89.53 359.06 107.07 130.41 68 E17a_E18a KnownJunction 0 122.69 57.36 377.78 190.98 136.33 324.07 75.83 246.49 253.73 229.35 34.54 53.27 12.82 67.63 83.32 35.46 9.07 62.35 122.54 111.60 348.67 94.30 182.42 69 ER18a ExonRegion 1 87.71 41.32 349.90 201.81 104.18 238.20 53.14 263.01 294.02 232.24 58.06 27.13 7.70 48.81 83.64 56.34 26.05 67.19 116.84 126.69 425.29 112.67 183.91 70 E18a_E19a KnownJunction 0 118.39 49.14 449.72 244.82 150.51 340.20 86.69 407.08 435.99 295.91 68.54 52.82 20.13 49.33 110.27 46.14 41.89 94.80 179.30 180.12 596.95 111.69 183.79 71 ER19a ExonRegion 0 119.01 60.79 426.82 293.76 140.24 266.24 60.46 354.99 401.58 291.95 93.50 44.06 38.32 56.75 95.17 60.98 41.49 106.44 151.09 152.13 487.09 136.98 192.36 72 E19a_E20a KnownJunction 0 103.35 89.33 436.71 324.03 184.47 363.31 67.22 411.97 418.75 338.97 69.86 37.51 6.49 68.52 98.65 59.13 33.38 96.38 161.04 128.47 458.39 145.86 195.65 73 ER20a ExonRegion 0 109.16 49.77 281.31 213.52 147.95 221.52 54.40 256.21 273.97 223.06 65.07 28.27 27.33 40.92 67.96 48.85 28.08 52.46 143.00 89.01 340.88 110.14 131.63