Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TK1 Gene 0 55.17 60.80 282.26 35.85 81.34 54.01 172.75 189.86 48.32 191.99 445.55 43.77 23.28 335.33 310.77 293.46 278.33 337.22 108.55 250.23 22.76 57.12 18.44 2 301634 Transcript 0 19.51 22.50 140.79 16.07 39.17 23.20 69.77 94.66 23.13 93.69 202.13 16.44 9.68 156.03 162.93 140.25 123.58 174.72 46.88 109.48 9.93 22.69 7.87 3 405273 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 8.00 6.95 7.06 2.03 9.67 12.74 36.47 5.50 1.98 8.91 32.62 0.00 0.05 27.68 26.67 31.51 19.14 27.77 15.57 19.22 0.95 4.11 3.11 5 E1_Ab KnownBoundary 1 78.31 58.48 68.36 7.36 85.99 100.34 369.73 46.78 16.26 69.33 239.85 0.00 5.68 363.24 181.35 226.35 135.11 193.92 105.32 183.51 2.35 35.15 31.07 6 ER1b ExonRegion 1 151.78 142.87 179.09 31.87 141.28 144.23 450.19 153.30 47.66 151.21 472.49 15.22 10.77 344.10 264.53 538.04 323.65 571.17 237.23 302.67 25.11 71.54 44.72 7 E1a_E2a KnownJunction 0 40.30 9.01 56.50 3.93 10.61 5.28 13.16 28.88 8.71 45.61 104.97 53.27 26.78 62.51 76.89 28.28 52.83 42.28 17.79 42.19 5.07 8.02 7.60 8 ER2a ExonRegion 1 28.90 11.18 111.70 14.05 10.79 8.83 27.02 72.43 25.82 108.99 453.02 35.72 17.88 102.67 81.96 40.96 276.24 70.73 24.29 96.08 24.45 13.15 6.06 9 E2a_E3a KnownJunction 1 41.79 17.04 168.50 19.54 15.45 17.43 47.56 117.51 38.02 148.73 805.84 30.91 21.91 170.29 115.46 60.92 525.48 105.42 26.73 166.89 40.65 14.57 7.85 10 ER3a ExonRegion 0 35.24 26.67 288.48 40.73 46.86 23.69 64.42 227.07 57.46 220.23 627.16 39.08 25.90 517.11 413.39 517.77 406.10 456.58 253.51 439.48 35.95 93.35 41.19 11 E3a_E4a KnownJunction 1 76.38 46.83 347.24 43.75 68.76 41.51 82.10 219.99 46.09 182.88 335.03 48.32 20.29 253.64 181.10 626.16 201.96 621.18 124.24 350.20 20.20 44.76 39.35 12 ER4a ExonRegion 1 31.23 43.96 270.12 30.77 178.73 123.61 321.20 159.55 40.73 178.67 318.68 60.15 13.87 234.13 240.65 184.90 193.84 226.17 47.07 248.80 23.77 35.29 10.87 13 E4_Da NovelBoundary 0 2.82 5.39 9.93 6.69 24.19 21.81 21.55 14.46 4.89 10.69 18.16 0.00 0.00 7.95 5.93 4.19 0.00 8.62 3.86 29.40 0.00 0.00 0.00 14 E4a_E5a KnownJunction 1 24.30 103.73 383.61 51.21 231.92 272.97 1038.44 212.93 51.01 237.57 533.08 84.03 13.64 420.57 375.80 218.66 375.88 189.52 47.25 348.41 17.17 78.93 6.66 15 I4 Intron 0 6.55 5.50 13.48 6.42 22.89 14.13 29.11 29.48 6.98 18.23 14.74 7.01 6.20 10.05 12.01 14.27 13.76 19.37 5.10 18.80 0.39 1.23 1.38 16 I4_SR1 SilentIntronRegion 0 5.97 5.13 6.71 5.00 22.19 9.17 24.26 16.34 4.91 7.06 7.26 4.33 4.85 6.44 6.31 8.54 6.53 8.90 3.16 10.03 0.00 1.48 0.85 17 I4_AR1 ActiveIntronRegion 0 4.23 2.71 9.60 6.81 27.87 7.18 41.59 26.65 6.90 14.91 13.53 6.49 7.82 12.18 19.58 6.44 19.26 12.93 6.37 16.13 0.00 2.43 1.47 18 I4_AR2 ActiveIntronRegion 0 11.00 5.91 12.08 7.13 36.12 12.16 45.01 28.67 6.59 21.75 17.02 11.26 11.82 10.12 8.08 9.80 15.39 12.98 4.68 18.10 0.00 1.88 0.80 19 I4_SR2 SilentIntronRegion 0 3.18 7.46 10.40 5.16 27.14 14.56 39.44 26.63 6.81 17.91 11.31 9.50 7.95 9.04 8.74 15.81 12.65 19.62 4.94 20.30 0.00 1.24 2.44 20 I4_AR3 ActiveIntronRegion 0 3.13 6.86 22.04 7.75 17.89 17.27 30.06 39.56 8.43 26.29 19.61 5.95 4.19 12.99 17.76 21.39 22.09 28.78 4.40 29.48 1.07 1.32 1.55 21 I4_SR3 SilentIntronRegion 0 4.30 5.24 14.51 7.09 24.24 14.15 32.98 29.72 7.77 17.41 19.37 8.34 4.06 10.05 8.33 19.55 11.09 26.39 6.32 12.29 0.61 0.41 3.47 22 I4_SR4 SilentIntronRegion 0 9.28 5.17 16.23 7.06 21.57 16.32 24.69 32.55 7.30 19.98 16.68 6.47 6.76 11.08 15.94 15.50 15.39 18.93 4.84 20.93 0.56 1.28 0.87 23 E5_Aa NovelBoundary 0 12.15 18.88 31.76 8.66 20.37 30.38 47.70 56.81 2.86 26.08 19.64 18.61 19.80 12.07 34.12 53.92 8.23 17.49 4.80 19.69 0.00 0.00 0.00 24 ER5a ExonRegion 0 85.81 166.08 365.94 40.28 108.37 107.18 425.17 216.42 55.09 225.71 603.09 48.73 24.49 423.84 341.70 267.95 344.36 233.02 90.39 305.39 32.42 65.26 10.31 25 E5a_E6a KnownJunction 0 197.74 140.76 392.86 41.69 122.41 74.33 184.25 260.86 56.86 239.18 553.19 61.37 19.64 462.71 330.18 382.72 309.58 389.91 98.07 314.41 28.17 78.32 11.52 26 I5 Intron 0 6.01 2.31 10.64 2.60 20.53 1.30 6.39 6.95 4.45 3.16 6.04 6.08 9.68 7.49 20.92 19.84 13.60 6.53 2.72 8.16 0.00 0.30 1.25 27 I5_SR1 SilentIntronRegion 0 6.06 2.33 10.73 2.62 20.69 1.31 6.45 7.01 4.48 3.18 6.09 6.13 9.76 7.55 21.08 20.00 13.71 6.57 2.74 8.22 0.00 0.30 1.26 28 ER6a ExonRegion 0 97.48 79.89 353.38 55.42 68.83 34.37 140.14 241.93 61.53 232.86 558.11 45.32 22.98 413.65 394.93 314.87 338.04 321.91 97.13 292.09 28.41 63.83 17.62 29 E6_Da NovelBoundary 0 17.93 14.01 68.30 5.49 28.27 22.94 77.73 26.16 3.59 44.99 11.79 0.00 0.00 29.31 34.98 16.32 30.39 66.49 19.20 65.71 0.00 0.00 0.00 30 E6a_E7a KnownJunction 0 101.43 71.57 458.00 61.83 126.74 47.19 242.76 314.18 54.66 304.10 647.85 62.27 46.75 540.41 465.79 491.75 365.87 601.12 132.14 344.83 38.30 57.56 23.90 31 E7_Aa NovelBoundary 0 10.15 12.04 53.10 5.13 22.41 10.51 58.38 37.21 5.50 39.54 14.42 0.00 19.48 16.95 22.13 23.58 24.22 42.28 0.00 39.18 0.00 0.00 0.00 32 ER7a ExonRegion 0 76.89 75.27 394.24 43.92 84.54 68.77 201.38 242.08 60.19 278.45 604.98 70.93 31.98 454.18 404.52 356.10 396.64 497.10 129.62 307.35 31.35 88.30 23.69 33 E7_Da KnownBoundary 0 45.42 76.04 271.52 25.34 69.69 42.13 137.39 153.41 43.43 205.74 366.72 35.71 27.27 224.56 279.00 137.91 249.18 201.88 50.54 148.86 24.03 18.13 10.76 34 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER7b ExonRegion 0 49.71 60.55 414.07 46.17 102.48 54.03 171.62 275.82 64.76 272.07 570.49 44.32 25.01 437.91 455.89 383.05 346.51 495.68 125.07 306.92 28.83 63.96 20.50 36 E7_Ab KnownBoundary 0 88.39 48.74 335.71 52.71 182.85 63.77 164.86 332.04 92.48 281.16 645.43 74.57 25.97 401.79 549.23 489.19 410.00 441.81 164.43 333.01 16.80 80.22 32.18 37 ER7c ExonRegion 1 30.02 38.07 194.75 34.13 66.14 17.43 76.70 150.08 43.76 118.44 272.99 60.61 41.70 224.58 204.20 180.28 168.54 150.10 67.53 171.36 8.22 44.91 9.25 38 ER7d ExonRegion 0 0.81 0.00 1.23 0.00 5.35 2.82 1.22 2.66 2.66 0.09 3.27 5.00 3.97 2.50 6.25 6.17 5.08 0.71 0.00 2.29 0.00 0.00 0.00 39 IG26 Intergenic 0 6.71 2.55 6.11 2.91 19.20 2.41 8.63 8.78 5.39 6.34 12.37 15.47 5.25 13.25 27.95 19.90 19.93 7.69 5.33 7.12 0.00 0.37 1.05 40 IG26_SR2 SilentIntergenicRegion 0 9.42 3.45 5.24 2.83 23.16 3.80 7.22 5.61 5.20 4.91 10.28 21.73 6.47 12.40 24.10 20.63 14.84 8.17 4.54 5.74 0.00 1.28 1.80 41 IG26_AR2 ActiveIntergenicRegion 0 6.55 2.45 7.24 3.32 19.95 2.26 10.15 11.64 6.28 7.76 16.68 13.99 5.37 15.90 33.85 22.40 24.93 9.40 6.79 9.14 0.00 0.00 0.85 42 IG26_SR1 SilentIntergenicRegion 0 3.17 1.26 4.74 2.15 10.22 0.67 7.21 6.31 3.29 5.36 3.08 9.23 3.06 7.84 19.13 12.85 15.85 1.95 2.69 3.83 0.00 0.00 0.53 43 IG26_AR1 ActiveIntergenicRegion 0 0.18 0.00 0.00 0.00 8.70 0.00 0.99 0.14 0.31 0.00 0.00 14.43 3.52 1.89 3.14 2.97 2.20 0.00 0.00 0.00 0.00 0.00 0.00