Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FN3K Gene 0 19.96 85.66 142.12 87.26 23.67 103.03 25.82 99.15 237.18 92.87 1.69 3.80 6.07 1.32 0.48 1.25 2.46 101.07 68.53 94.79 33.83 16.27 28.45 2 457624 Transcript 0 4.59 9.56 8.61 13.88 4.36 13.97 10.29 12.53 15.95 7.69 0.70 0.64 2.20 1.23 0.00 0.54 0.00 8.65 3.46 10.76 1.21 0.00 2.12 3 300784 Transcript 0 39.74 174.64 278.41 181.07 46.02 156.40 35.68 192.01 433.99 160.17 3.21 2.65 11.60 1.61 0.55 0.51 3.10 167.82 137.40 154.15 58.33 37.69 53.49 4 IG30 Intergenic 0 4.34 4.55 13.67 4.54 11.27 5.38 11.34 11.09 12.33 13.45 2.68 1.71 1.07 4.01 4.34 3.58 3.46 12.63 4.52 10.47 1.39 1.41 2.81 5 IG30_SR1 SilentIntergenicRegion 0 0.98 8.45 2.92 2.83 11.73 0.49 11.56 4.59 7.65 3.97 0.30 0.00 15.33 0.19 0.45 9.03 14.22 7.75 6.25 10.47 0.25 3.69 0.00 6 IG30_AR1 ActiveIntergenicRegion 0 13.81 12.29 38.09 12.65 20.59 15.25 24.21 29.09 26.52 33.71 11.97 4.91 1.95 12.24 11.92 10.71 10.37 23.99 5.74 23.98 3.68 3.76 7.76 7 IG30_AR5 ActiveIntergenicRegion 0 3.61 3.68 14.82 8.12 12.08 7.47 15.90 16.00 16.80 16.52 7.00 2.05 3.08 6.76 11.45 9.87 8.34 21.79 8.43 19.94 0.00 3.77 5.32 8 ER1a ExonRegion 0 15.98 36.21 32.15 13.12 6.73 73.81 21.96 20.42 44.44 21.45 0.49 0.00 0.00 0.00 0.00 0.00 4.17 34.10 20.06 32.69 17.84 5.30 13.23 9 E1a_E2a KnownJunction 0 7.56 39.73 88.55 25.40 8.06 18.80 12.98 65.92 109.11 47.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.31 9.60 55.22 17.17 6.00 21.77 10 ER2a ExonRegion 0 12.53 60.77 151.77 76.55 19.22 88.26 26.62 85.85 229.10 92.45 2.07 2.82 1.30 1.20 0.69 0.18 2.93 124.78 62.66 116.04 30.13 18.29 32.34 11 E2a_E3a KnownJunction 0 25.49 151.68 271.31 193.45 75.81 327.60 101.53 213.38 440.53 161.14 2.16 0.00 0.00 3.00 0.00 3.42 13.65 180.74 108.61 183.51 62.33 22.78 69.66 12 E3_Aa NovelBoundary 0 3.63 44.40 20.16 34.96 0.00 0.00 10.95 12.73 2.69 6.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 0.00 12.66 0.00 0.00 0.00 13 ER3a ExonRegion 0 29.86 187.97 315.49 157.83 60.26 297.99 88.01 185.41 462.78 178.56 1.47 4.89 0.00 1.77 0.00 3.00 4.99 176.46 122.77 189.31 66.54 21.70 60.62 14 E3_Da NovelBoundary 0 3.26 46.37 52.54 48.35 22.84 46.62 15.06 48.84 40.83 25.14 0.00 0.00 0.00 0.00 0.00 3.76 0.00 41.37 16.19 30.23 5.50 0.00 0.00 15 E3a_E4a KnownJunction 0 59.49 184.57 315.87 175.67 47.45 230.04 37.32 173.58 479.97 194.02 2.68 0.00 0.00 4.89 5.19 0.00 4.68 173.61 130.17 199.10 68.63 33.19 36.19 16 I3 Intron 0 4.97 12.05 18.79 18.40 6.28 21.95 12.29 24.49 39.74 13.96 0.00 6.55 0.86 0.00 0.00 0.66 0.37 14.90 14.61 16.90 3.94 2.33 7.23 17 I3_AR1 ActiveIntronRegion 0 4.99 12.11 18.87 18.48 6.31 22.04 12.34 24.59 39.92 14.02 0.00 6.58 0.87 0.00 0.00 0.67 0.37 14.97 14.67 16.97 3.95 2.34 7.26 18 E4_Aa NovelBoundary 0 5.70 35.98 54.97 57.47 12.39 7.50 14.88 32.20 51.21 20.28 0.00 6.30 6.82 0.00 0.00 0.00 3.83 85.15 18.35 35.73 8.15 0.00 16.82 19 ER4a ExonRegion 0 35.98 140.66 299.05 159.67 41.91 144.19 38.19 165.49 417.69 162.47 2.42 4.75 7.23 3.54 1.26 0.00 3.06 166.88 143.73 165.67 60.35 31.10 44.26 20 E4_Da NovelBoundary 0 3.26 43.74 33.53 29.70 11.63 18.85 8.26 16.27 27.17 13.62 2.32 0.00 0.00 0.00 0.00 0.00 0.00 57.99 8.19 35.03 0.00 0.00 4.35 21 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4a_E6a KnownJunction 0 45.79 146.36 319.56 179.50 58.49 150.71 23.98 177.73 428.50 155.13 2.58 0.00 13.15 2.18 0.00 0.00 3.46 152.13 122.07 151.80 79.14 39.62 61.03 23 I4_AR1 ActiveIntronRegion 0 3.86 9.88 8.32 7.41 6.50 21.71 16.88 14.08 19.55 9.86 0.00 0.00 0.00 1.22 0.62 0.00 2.00 19.52 12.57 14.21 4.01 0.00 5.35 24 E5_Aa NovelBoundary 0 5.78 21.25 50.09 78.81 0.00 29.19 32.72 48.39 53.82 35.57 0.00 0.00 0.00 2.35 0.00 0.00 0.00 35.19 21.55 18.47 2.66 0.00 10.67 25 ER5a ExonRegion 0 9.19 19.12 17.22 27.77 8.71 27.94 20.57 25.07 31.90 15.38 1.40 1.29 4.39 2.45 0.00 1.08 0.00 17.30 6.91 21.52 2.42 0.00 4.25 26 E5_Da NovelBoundary 0 3.04 23.48 22.06 71.95 37.61 22.20 33.61 38.45 42.74 17.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.27 0.00 19.69 8.15 0.00 24.58 27 I5 Intron 0 2.86 14.48 17.45 19.18 7.42 14.64 9.38 18.05 21.04 13.96 0.43 0.67 0.29 1.39 0.80 0.45 0.62 27.81 9.79 17.78 4.05 1.48 5.61 28 I5_AR1 ActiveIntronRegion 0 2.79 14.24 20.11 21.88 8.81 18.22 11.73 20.66 23.36 16.37 0.46 0.85 0.46 1.90 0.77 0.36 0.99 32.11 12.20 19.87 4.49 1.75 5.63 29 I5_SR1 SilentIntronRegion 0 3.08 15.45 13.49 15.22 5.12 8.97 5.65 14.21 17.82 10.31 0.40 0.37 0.00 0.54 0.89 0.62 0.00 21.42 5.97 14.84 3.44 1.08 5.72 30 E6_Aa NovelBoundary 0 7.56 25.72 30.10 43.88 19.52 39.92 17.93 17.79 32.49 13.97 0.00 0.00 0.00 2.47 0.00 0.00 0.00 18.99 29.46 32.98 3.15 0.00 0.00 31 ER6a ExonRegion 0 49.87 177.70 310.52 183.59 50.16 175.82 34.29 197.07 470.99 174.31 3.82 5.70 11.29 3.41 1.79 0.10 2.90 195.04 150.80 172.79 59.86 31.68 59.02 32 E6_Da NovelBoundary 0 6.67 32.03 34.27 35.03 24.45 30.15 16.61 25.51 34.09 21.09 0.00 0.00 0.00 2.12 0.00 0.00 0.00 33.66 43.67 51.20 0.00 5.02 7.85 33 E6a_E7a KnownJunction 0 46.53 291.59 355.93 273.13 54.24 210.84 66.82 290.39 593.40 216.16 4.84 0.00 13.31 0.00 0.00 0.00 4.11 225.88 210.74 203.00 60.73 62.46 68.21 34 I6 Intron 0 12.01 35.64 39.22 35.89 18.45 25.03 13.98 16.65 36.62 22.10 0.56 1.02 1.72 1.52 1.47 1.71 0.95 27.58 35.69 43.71 4.27 2.54 7.38 35 I6_AR1 ActiveIntronRegion 0 9.56 31.33 40.26 42.89 19.54 34.34 17.23 14.03 35.20 21.34 0.00 1.89 0.51 1.62 1.63 1.58 1.32 32.94 40.61 46.34 4.68 1.94 10.53 36 I6_SR1 SilentIntronRegion 0 6.78 25.22 14.11 11.65 7.05 7.04 4.03 8.52 18.49 7.49 0.55 0.00 2.33 0.86 0.00 0.84 1.00 7.00 16.70 27.11 2.33 3.81 2.38 37 I6_AR2 ActiveIntronRegion 0 27.10 70.15 77.83 54.00 36.11 23.48 22.77 42.89 70.24 50.52 2.33 0.00 0.24 2.29 2.72 3.98 0.00 41.53 54.68 68.98 6.86 2.90 7.45 38 I6_SR2 SilentIntronRegion 0 18.68 38.04 42.28 31.09 15.55 19.22 7.24 14.42 43.83 22.92 1.30 0.00 10.51 1.57 2.65 1.33 0.00 29.72 27.95 33.90 3.04 2.37 1.27 39 E7_Aa NovelBoundary 0 40.38 89.46 58.93 71.62 31.41 23.68 34.98 63.66 83.80 37.28 5.32 6.00 0.00 0.00 0.00 3.25 3.74 40.42 26.82 64.43 2.59 8.08 0.00 40 ER7a ExonRegion 0 16.79 82.91 127.62 88.08 21.19 88.21 17.65 102.84 243.09 95.09 1.59 4.89 8.64 0.87 0.41 1.93 1.94 98.22 66.00 88.99 33.59 17.01 25.72