Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CBX8 Gene 0 15.12 74.70 88.32 56.29 72.00 138.58 52.36 104.68 45.42 127.14 31.77 4.17 3.81 13.80 15.30 9.10 8.29 47.44 66.41 70.47 6.18 18.22 17.91 2 485449 Transcript 0 0.00 0.73 0.00 0.48 0.90 6.43 0.00 6.07 1.12 4.82 5.33 1.09 0.65 0.19 0.35 0.00 0.00 2.51 0.54 2.34 0.00 0.00 0.00 3 427800 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 4.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 413392 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.54 0.00 0.00 0.00 0.47 0.02 1.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.00 1.28 0.85 5 269385 Transcript 0 19.84 66.35 67.71 51.95 57.81 132.27 44.94 84.05 40.37 114.08 33.24 11.39 7.30 11.86 14.28 9.09 11.77 36.24 63.10 63.01 7.91 15.34 28.66 6 ER1a ExonRegion 0 0.00 1.47 0.00 0.96 1.81 12.86 0.00 12.14 2.23 9.64 10.65 2.18 1.30 0.39 0.69 0.00 0.00 5.02 1.08 4.68 0.00 0.00 0.00 7 E1_Ab KnownBoundary 0 0.00 0.00 0.00 2.00 0.00 19.36 0.00 18.15 3.47 17.25 10.69 13.65 0.00 0.00 0.00 0.00 0.00 2.24 0.00 3.26 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.16 0.74 0.06 1.47 1.03 11.85 0.00 5.12 0.35 8.42 11.69 3.31 0.00 1.48 0.04 0.00 0.00 1.71 0.00 4.63 0.00 0.00 0.00 9 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 4.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 I1 Intron 0 0.75 0.47 0.32 0.82 1.08 5.42 0.40 10.97 1.13 9.87 7.86 1.14 0.14 0.08 0.11 0.00 0.00 2.39 0.50 2.81 0.08 0.44 0.31 12 I1_SR1 SilentIntronRegion 0 0.75 0.47 0.32 0.82 1.08 5.43 0.40 10.98 1.13 9.88 7.87 1.14 0.14 0.08 0.11 0.00 0.00 2.40 0.51 2.81 0.08 0.44 0.31 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.93 0.04 2.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.21 0.00 0.05 1.70 14 E2_Da NovelBoundary 0 3.19 0.00 0.00 0.00 0.00 7.15 0.00 1.60 1.36 8.11 7.42 0.00 0.00 4.89 0.00 0.00 0.00 0.00 4.05 3.26 0.00 0.00 12.12 15 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 16 E3_Aa NovelBoundary 0 0.00 2.57 6.48 0.00 0.00 9.88 5.48 6.65 2.60 11.74 5.21 0.00 0.00 2.35 0.00 0.00 4.21 1.74 8.75 0.00 0.00 2.88 11.27 17 ER3a ExonRegion 0 29.93 92.08 57.00 42.53 56.49 160.57 50.14 57.84 32.51 111.50 42.92 7.36 7.02 14.78 19.07 19.28 18.29 37.43 92.90 73.67 9.31 19.38 36.17 18 E3_Da NovelBoundary 0 3.78 5.53 5.74 1.27 0.00 7.89 0.00 11.99 2.55 20.17 12.42 6.30 0.00 2.47 0.00 0.00 0.00 1.95 3.48 0.00 0.00 2.45 0.00 19 E3a_E4a KnownJunction 0 16.23 25.32 53.75 57.37 28.52 90.86 23.10 77.47 43.11 114.08 36.54 24.76 12.82 11.77 13.72 3.76 11.97 34.61 33.98 49.66 11.00 13.72 39.27 20 I3 Intron 0 4.07 18.48 8.93 6.74 7.94 16.33 6.01 9.44 3.86 15.22 6.08 0.62 2.70 1.40 3.19 1.56 0.58 5.94 10.57 5.95 2.31 3.28 2.05 21 I3_AR1 ActiveIntronRegion 0 4.09 18.60 8.99 6.79 8.00 16.45 6.05 9.51 3.88 15.32 6.11 0.63 2.72 1.41 3.21 1.57 0.58 5.98 10.64 5.99 2.33 3.30 2.07 22 E4_Aa NovelBoundary 0 3.63 8.62 45.56 47.55 7.64 33.84 9.27 29.20 17.82 44.59 20.79 6.45 6.66 2.18 14.09 3.59 9.54 24.46 59.86 9.01 5.75 0.00 0.00 23 ER4a ExonRegion 0 18.28 31.52 77.03 70.56 30.16 116.07 13.12 109.05 49.80 176.34 89.00 31.39 10.87 22.59 28.22 14.66 28.51 47.16 72.61 83.22 13.27 41.77 54.33 24 E4_Da NovelBoundary 0 0.00 22.96 28.56 25.40 17.83 18.34 11.79 43.54 25.09 60.52 17.32 0.00 6.82 2.47 0.00 0.00 3.55 21.97 52.71 33.88 2.59 2.63 4.35 25 E4a_E5a KnownJunction 0 24.45 52.62 109.22 84.64 34.55 144.41 15.37 129.47 67.16 238.78 126.77 24.31 6.82 41.97 33.75 32.47 43.01 54.06 110.40 115.56 16.31 69.68 81.44 26 E5_Aa NovelBoundary 0 17.71 41.51 30.51 16.98 26.91 16.52 12.59 46.70 18.49 33.01 11.74 0.00 8.28 2.12 0.00 7.60 0.00 18.99 12.99 27.10 3.15 2.82 8.19 27 ER5a ExonRegion 0 10.97 42.21 150.91 133.25 34.58 123.98 16.41 147.29 84.27 293.82 130.00 26.50 6.96 39.72 51.87 39.00 34.41 123.66 179.78 204.00 18.66 65.57 61.14 28 E5_Da NovelBoundary 0 2.89 3.22 13.01 1.50 4.07 0.00 3.84 23.74 4.98 11.50 0.00 0.00 6.82 0.00 0.00 0.00 0.00 15.92 25.22 6.52 0.00 0.00 0.00 29 E5a_E6a KnownJunction 0 20.89 48.81 182.43 181.46 52.55 191.08 34.58 218.64 83.39 347.65 85.81 13.35 6.01 40.97 58.35 67.08 12.16 189.98 245.18 209.58 13.90 54.38 78.53 30 E6_Aa NovelBoundary 0 14.15 16.18 11.62 3.70 26.83 5.79 15.32 22.34 9.61 20.44 7.48 0.00 0.00 2.47 0.00 0.00 0.00 15.59 36.99 10.61 0.00 0.00 11.95 31 ER6a ExonRegion 0 11.31 44.65 152.02 116.82 66.13 197.67 30.95 190.36 76.85 287.94 93.07 11.63 15.19 30.52 42.87 49.15 17.34 174.13 171.63 151.51 8.35 36.23 77.19 32 E6_Da NovelBoundary 0 0.00 6.71 31.55 7.09 21.14 7.50 20.62 27.93 4.34 9.72 2.47 0.00 0.00 4.59 0.00 0.00 4.77 7.25 0.00 15.15 0.00 5.76 0.00 33 E6a_E7a KnownJunction 0 7.41 50.91 165.22 112.71 81.49 291.08 46.77 194.90 74.10 274.10 81.81 24.91 28.73 30.31 36.34 18.03 40.30 123.66 75.58 127.39 3.09 21.74 46.35 34 I6_SR1 SilentIntronRegion 0 2.55 3.41 21.47 9.81 5.10 12.21 9.49 18.58 4.65 7.42 5.03 0.00 1.17 1.61 1.22 1.79 2.99 10.75 12.82 8.41 1.17 2.93 3.54 35 ER7a ExonRegion 0 29.59 134.38 134.00 75.78 78.26 243.54 69.13 128.46 68.89 208.12 67.90 13.46 21.92 35.04 28.13 26.39 20.87 103.35 95.06 103.61 13.69 42.88 39.30 36 E7_Da KnownBoundary 0 55.12 111.30 113.04 66.03 66.04 138.78 33.70 142.24 62.27 207.51 71.91 12.60 6.82 32.26 23.86 29.31 21.79 113.58 91.86 103.87 19.52 33.00 68.29 37 ER7b ExonRegion 0 30.12 73.66 115.20 77.63 40.83 133.09 38.28 89.42 62.64 202.11 67.71 7.99 5.59 36.21 37.48 24.32 15.58 102.47 86.51 104.15 21.40 40.20 39.32 38 E7_Db KnownBoundary 0 41.34 121.56 121.70 98.46 43.12 257.41 78.21 100.06 76.91 205.44 91.13 0.00 0.00 32.96 36.22 15.04 21.32 107.74 102.97 128.67 16.43 43.66 45.67 39 ER7c ExonRegion 0 18.52 85.58 106.70 80.89 62.11 188.76 65.85 132.53 72.23 214.37 76.37 3.35 7.75 36.17 46.40 21.38 23.32 90.16 93.59 106.33 15.99 44.98 44.64 40 E7_Dc KnownBoundary 0 12.67 88.60 110.29 108.74 55.69 138.22 78.04 181.34 56.77 232.14 50.07 0.00 13.64 41.85 93.58 27.69 18.05 122.08 229.18 94.41 15.01 45.56 44.64 41 ER7d ExonRegion 0 13.36 81.64 92.38 55.96 88.41 145.38 61.58 116.84 45.47 116.65 20.27 2.04 2.05 9.02 10.05 4.25 5.06 36.67 62.41 65.69 3.43 12.94 10.54 42 IG50_AR2 ActiveIntergenicRegion 0 16.75 90.99 78.15 57.94 120.27 25.68 56.05 78.71 26.52 108.41 12.73 8.46 1.16 1.95 1.99 2.07 1.48 8.91 23.93 30.24 0.33 1.15 0.00 43 IG50_SR1 SilentIntergenicRegion 0 13.23 78.25 47.76 43.02 69.87 16.67 46.91 62.62 30.37 87.48 12.08 7.97 0.00 3.80 1.19 1.15 0.00 3.40 16.87 30.27 0.00 0.71 0.00 44 IG50_AR1 ActiveIntergenicRegion 0 26.59 80.86 65.45 50.91 97.73 54.50 88.07 75.15 25.68 123.32 22.85 6.82 1.23 7.42 0.88 2.98 2.84 15.39 43.89 37.10 1.26 0.60 0.42