Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NARF Gene 0 153.65 232.59 306.69 207.44 166.40 121.03 139.49 269.09 246.19 320.53 196.50 84.82 42.62 132.55 134.16 139.78 113.04 164.09 210.45 197.30 75.34 91.23 131.67 2 390006 Transcript 0 9.13 6.79 7.24 8.93 7.03 16.72 1.87 19.21 18.53 14.15 9.20 5.02 0.67 13.53 11.06 5.59 13.12 11.62 9.17 14.47 11.65 1.47 8.16 3 345415 Transcript 0 3.63 26.84 23.83 5.23 0.00 10.51 8.57 8.63 9.37 21.17 2.37 0.00 0.00 2.47 0.00 0.00 0.00 9.24 17.13 0.00 0.00 0.00 4.35 4 374611 Transcript 0 1.02 1.12 0.57 0.20 0.35 0.13 0.08 0.40 0.21 0.02 0.00 0.00 0.14 0.19 0.17 0.34 0.00 0.00 0.00 0.99 0.87 0.00 2.30 5 457415 Transcript 0 2.33 3.93 4.87 3.74 0.54 2.64 1.28 5.00 7.33 6.40 0.52 2.49 0.00 0.63 3.54 1.15 0.86 1.36 2.56 0.79 0.00 1.11 0.20 6 412719 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 412079 Transcript 0 8.30 2.05 2.20 1.46 3.16 0.38 2.76 1.67 4.41 3.45 28.49 4.39 6.31 14.14 11.53 11.61 3.17 5.97 5.91 9.18 3.72 4.78 10.34 8 309794 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 427631 Transcript 1 77.03 52.56 72.33 56.21 68.03 37.29 37.43 52.80 68.87 51.78 36.08 42.90 4.26 63.00 38.33 53.41 22.61 40.54 53.77 41.65 16.83 19.00 48.14 10 IG23_AR2 ActiveIntergenicRegion 0 6.00 2.88 9.72 0.96 8.55 2.92 11.25 9.76 10.04 7.25 22.01 76.69 46.60 28.71 30.95 11.15 26.47 1.81 2.33 4.28 4.94 9.72 2.01 11 IG23_AR3 ActiveIntergenicRegion 0 6.38 3.88 7.49 2.21 14.30 5.12 21.68 14.50 8.83 6.23 12.43 60.22 39.51 32.39 43.17 33.60 41.86 0.13 8.35 6.94 6.64 16.24 4.60 12 IG23_SR2 SilentIntergenicRegion 0 10.91 2.59 1.35 0.00 4.46 5.14 13.06 1.39 1.50 0.97 5.04 4.41 3.77 10.76 23.32 0.99 16.57 0.00 1.00 5.88 7.17 2.78 0.69 13 ER1a ExonRegion 0 6.04 4.44 4.46 4.17 5.66 9.48 3.74 11.60 11.06 12.10 8.20 3.74 1.34 16.88 22.11 11.18 17.54 9.98 14.10 15.13 11.31 2.94 10.01 14 E1a_E3a KnownJunction 0 12.22 9.14 10.02 13.68 8.40 23.96 0.00 26.82 26.01 16.20 10.21 6.30 0.00 10.18 0.00 0.00 8.70 13.27 4.24 13.81 11.98 0.00 6.32 15 ER2a ExonRegion 0 14.08 16.23 5.78 8.23 17.31 16.69 21.13 5.36 5.12 15.73 17.87 0.00 2.68 12.30 16.05 24.87 23.04 14.44 47.72 11.51 10.07 4.04 23.79 16 E2_Ab KnownBoundary 0 54.23 61.83 20.64 28.77 85.82 60.76 61.34 31.34 19.30 55.66 62.07 6.00 6.82 40.14 41.78 73.48 76.02 70.84 160.29 26.65 27.80 8.33 95.35 17 ER2b ExonRegion 1 148.03 131.65 118.57 60.31 133.83 131.55 171.40 115.35 97.12 175.02 103.03 3.63 9.90 72.87 64.66 163.19 126.25 155.99 258.93 88.14 61.74 59.49 206.78 18 E2a_E3a KnownJunction 0 36.67 52.89 106.50 32.83 20.46 15.62 24.60 65.23 60.07 121.55 58.96 13.95 26.46 29.08 26.70 33.07 33.38 54.68 38.87 35.67 23.41 15.37 23.30 19 ER3a ExonRegion 1 110.24 139.34 183.96 102.54 70.56 67.71 59.50 204.00 157.56 281.98 279.67 98.62 44.58 111.82 77.01 72.25 195.04 117.55 188.13 146.76 107.25 60.63 98.32 20 E3_Da NovelBoundary 1 29.49 28.02 92.46 144.70 50.25 39.58 36.39 129.14 130.67 123.08 45.96 24.76 21.75 34.32 35.97 179.18 47.31 179.41 492.63 94.47 18.29 14.57 319.43 21 E3a_E4a KnownJunction 0 105.43 191.02 265.31 162.88 57.98 59.00 66.82 304.24 200.78 398.66 303.76 93.93 39.45 184.77 131.41 138.34 152.22 235.41 313.61 203.45 78.15 123.57 160.65 22 E3a_E5a KnownJunction 0 3.63 26.84 23.83 5.23 0.00 10.51 8.57 8.63 9.37 21.17 2.37 0.00 0.00 2.47 0.00 0.00 0.00 9.24 17.13 0.00 0.00 0.00 4.35 23 I3 Intron 0 20.15 25.71 41.07 43.05 29.27 22.58 26.82 38.07 47.74 49.14 14.22 5.94 9.85 11.23 11.63 20.25 14.63 55.12 37.69 55.00 12.84 5.87 24.23 24 I3_AR1 ActiveIntronRegion 1 11.61 10.04 18.02 21.15 14.67 15.08 5.07 12.71 17.15 10.29 3.18 13.55 11.04 9.59 4.68 34.23 5.43 34.17 33.19 10.50 4.83 3.43 40.26 25 I3_SR1 SilentIntronRegion 0 28.73 26.86 38.86 34.28 33.38 32.97 28.17 16.07 18.91 18.81 8.51 0.00 5.77 5.99 9.02 27.26 7.27 45.85 53.76 20.30 4.04 3.06 23.70 26 I3_SR2 SilentIntronRegion 0 15.10 23.33 47.15 42.31 28.07 18.92 23.33 34.85 44.12 47.24 10.72 5.39 9.03 13.22 13.13 16.48 12.36 46.54 33.28 51.53 13.42 5.94 21.12 27 I3_AR3 ActiveIntronRegion 0 22.51 27.98 40.14 46.61 30.86 24.10 30.26 44.38 55.37 56.69 17.67 6.25 10.70 10.97 11.80 20.78 17.50 63.09 39.37 63.88 14.21 6.36 25.18 28 E4_Aa NovelBoundary 0 79.94 101.96 67.80 83.21 96.69 71.38 108.68 85.84 116.46 105.00 23.22 6.30 6.82 18.89 8.90 26.75 13.65 64.13 58.64 104.50 41.64 11.94 16.13 29 I3_SR3 SilentIntronRegion 0 23.50 26.02 21.97 12.36 15.04 18.84 19.27 14.72 22.57 19.14 4.60 9.85 7.60 5.71 3.00 12.30 3.30 13.06 9.89 40.94 4.26 2.87 11.14 30 ER4a ExonRegion 0 137.85 375.18 348.64 234.01 309.92 156.29 195.68 332.63 323.38 455.10 315.80 148.61 76.08 190.90 145.06 248.94 166.31 294.29 344.82 283.70 118.79 156.38 248.51 31 E4_Da NovelBoundary 0 42.53 78.87 64.75 79.54 58.06 13.00 33.08 72.04 94.04 83.97 16.48 18.91 28.24 9.89 17.80 16.41 38.43 79.55 46.97 99.65 31.82 6.25 24.07 32 E4a_E5a KnownJunction 0 132.99 413.74 442.09 337.45 600.85 357.86 500.05 380.18 430.00 505.65 359.51 199.87 141.06 249.10 170.34 209.43 217.48 195.33 292.90 365.99 119.97 173.41 175.08 33 I4 Intron 0 20.51 44.28 30.66 40.89 21.79 16.84 23.81 39.84 43.56 43.20 13.05 6.67 6.86 7.51 10.88 19.98 15.94 56.87 42.02 48.62 10.64 8.02 21.04 34 I4_SR1 SilentIntronRegion 0 23.79 40.16 46.64 56.33 33.77 27.98 33.27 55.00 52.80 60.29 16.04 8.33 6.06 6.07 9.57 18.50 19.09 80.91 43.06 70.39 15.95 7.01 23.25 35 I4_AR1 ActiveIntronRegion 0 22.48 30.57 29.48 33.96 17.54 15.83 25.97 48.65 51.92 50.08 14.70 3.44 5.50 5.84 9.08 22.09 20.12 70.21 38.08 61.45 10.05 5.41 21.13 36 I4_SR2 SilentIntronRegion 0 20.84 43.33 32.81 46.76 22.17 16.57 23.00 40.33 46.04 44.50 13.62 7.37 7.36 8.78 12.55 21.91 16.51 56.72 47.98 44.99 11.38 9.97 23.54 37 I4_AR4 ActiveIntronRegion 0 14.08 157.71 0.00 0.00 13.84 10.84 24.43 0.00 0.00 0.00 2.86 7.53 8.56 6.12 4.54 4.39 0.00 0.00 14.13 25.10 1.63 3.08 4.34 38 E5_Aa NovelBoundary 0 57.49 313.10 93.11 242.36 61.04 40.32 56.13 106.09 124.80 124.45 20.43 18.01 26.95 7.77 4.45 16.06 9.54 43.07 37.74 62.64 10.69 20.76 16.05 39 ER5a ExonRegion 0 183.93 469.89 741.81 514.27 329.58 244.27 310.64 598.64 545.01 714.21 462.99 236.59 127.90 244.07 178.39 253.93 209.77 317.72 448.03 390.69 135.22 223.99 225.83 40 E5a_E6a KnownJunction 0 331.32 512.01 790.13 646.97 371.65 214.65 355.60 651.93 608.15 775.26 456.17 174.81 121.42 378.78 239.20 350.16 191.21 394.18 671.17 436.11 132.94 331.82 312.94 41 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 3.67 0.00 0.00 4.05 0.00 0.00 0.00 0.00 42 E5a_E8a KnownJunction 0 10.22 18.29 22.71 17.25 0.00 11.36 6.40 23.82 34.17 29.63 2.16 12.45 0.00 2.59 13.35 3.76 4.11 6.51 12.80 3.26 0.00 5.57 0.00 43 ER6a ExonRegion 0 232.91 569.54 591.32 391.61 301.27 165.15 238.45 506.67 463.78 585.51 338.29 168.14 121.94 246.89 171.32 243.49 148.64 254.98 367.57 339.05 119.54 171.36 213.68 44 E6a_E7a NovelJunction 0 9.93 0.00 3.19 1.53 0.00 0.00 0.00 2.55 12.15 7.39 52.28 23.86 6.17 14.95 9.64 11.62 0.00 6.34 8.56 11.70 0.00 7.78 3.16 45 E6a_E8a KnownJunction 0 198.92 632.39 342.92 301.43 218.42 134.41 230.22 331.63 322.74 483.11 178.52 112.84 54.22 163.11 120.03 139.19 134.74 315.83 234.27 178.71 88.28 96.50 218.02 46 ER7a ExonRegion 0 10.54 2.81 3.32 4.37 5.74 1.13 6.43 1.60 5.18 5.99 39.71 13.17 5.46 21.23 11.22 19.27 5.48 9.16 9.46 14.06 6.04 6.12 12.14 47 E7a_E8a KnownJunction 0 14.37 3.35 3.28 0.00 3.74 0.00 1.85 3.41 8.04 4.35 43.12 0.00 13.47 21.19 23.36 11.88 4.02 8.75 4.24 13.49 5.13 8.21 18.87 48 ER8a ExonRegion 0 179.69 454.56 355.40 232.16 164.50 142.03 166.41 315.19 305.66 431.82 201.62 64.69 58.76 188.59 162.88 160.59 123.52 182.79 251.99 239.24 84.09 111.07 152.63 49 E8_Da NovelBoundary 0 26.38 45.98 41.90 68.46 39.13 7.95 15.06 55.82 59.14 49.69 0.00 12.60 0.00 24.43 13.60 12.65 0.00 29.64 36.05 43.40 5.56 6.00 7.77 50 E8a_E9a KnownJunction 0 201.67 538.52 368.82 219.32 288.29 175.01 320.27 355.00 293.46 399.97 228.69 43.36 73.21 214.73 185.55 212.68 124.92 220.24 337.23 254.45 109.90 157.06 184.73 51 I8 Intron 0 22.30 30.80 47.76 50.80 30.79 21.00 24.73 47.53 50.13 74.72 12.14 7.45 6.76 13.01 9.78 12.23 8.44 29.18 28.42 27.62 8.33 11.87 19.67 52 I8_AR1 ActiveIntronRegion 0 25.95 42.27 38.32 42.99 24.85 24.06 25.63 45.23 38.91 73.17 3.27 6.52 2.22 10.49 10.99 10.36 6.80 25.04 24.34 27.64 3.37 5.18 16.18 53 I8_SR1 SilentIntronRegion 0 27.31 40.10 55.96 71.38 43.40 26.55 30.27 53.64 58.57 101.14 8.31 7.23 9.82 13.19 8.79 9.40 6.52 41.65 39.01 35.52 7.61 12.70 18.53 54 I8_AR2 ActiveIntronRegion 0 19.57 24.55 47.23 45.35 27.74 18.23 22.52 45.97 49.98 65.58 15.81 7.79 6.81 13.60 9.85 13.76 9.57 25.72 25.63 24.77 9.86 13.29 21.01 55 ER9a ExonRegion 0 226.37 384.96 420.42 274.85 275.89 198.28 294.38 405.79 332.84 459.41 216.14 81.59 73.78 209.77 194.74 193.78 148.03 244.53 283.18 299.52 105.02 119.69 188.98 56 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E9a_E13a KnownJunction 0 203.59 273.96 473.14 301.66 251.44 209.77 254.33 444.01 340.07 538.82 250.96 48.62 41.72 201.48 265.90 256.68 147.83 228.62 265.70 304.25 128.31 103.61 150.84 59 E10a_E12b KnownJunction 0 2.89 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 2.41 0.00 6.66 60 ER10a ExonRegion 0 0.18 0.80 1.70 0.59 1.05 0.40 0.23 1.20 0.64 0.05 0.00 0.00 0.41 0.56 0.50 1.03 0.00 0.00 0.00 0.46 0.19 0.00 0.26 61 I10 Intron 0 22.34 31.18 22.91 29.33 39.24 15.08 41.78 44.36 24.74 30.57 15.03 11.60 18.82 14.08 11.70 22.13 16.14 23.07 20.53 22.22 6.86 6.95 13.70 62 I10_SR1 SilentIntronRegion 0 17.86 32.70 22.60 29.53 36.84 13.43 44.90 45.67 26.54 30.26 16.27 11.46 17.25 12.91 11.20 20.13 18.98 17.80 18.21 23.62 3.22 6.47 11.32 63 I10_AR1 ActiveIntronRegion 0 28.54 29.47 23.56 29.35 42.84 17.43 38.04 43.07 22.59 31.26 13.52 11.91 21.11 15.78 12.46 25.01 12.53 30.32 23.83 20.56 11.77 7.65 17.02 64 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER11a ExonRegion 0 0.00 0.00 0.00 0.08 0.00 0.00 0.00 0.00 0.41 0.45 0.43 0.00 0.00 0.00 0.48 0.00 0.18 0.31 0.00 0.00 0.00 0.00 0.00 66 E12_Aa NovelBoundary 0 170.40 252.59 309.63 354.90 213.16 274.44 315.01 394.31 450.34 299.38 73.23 29.71 47.24 38.85 55.75 134.41 183.36 509.38 176.57 312.36 148.57 71.58 170.47 67 E12_Ab NovelBoundary 0 13.71 22.30 177.55 200.91 29.71 11.53 26.19 192.97 173.23 178.50 10.48 0.00 7.30 3.00 0.00 21.28 8.98 186.91 9.32 6.14 11.98 8.63 8.45 68 ER12a ExonRegion 0 1.41 1.36 1.63 1.36 2.68 1.83 0.00 1.15 2.06 1.91 0.00 0.00 0.00 0.54 3.87 1.98 0.00 0.00 0.00 0.71 0.00 0.00 0.98 69 ER12b ExonRegion 0 18.38 11.82 15.20 28.87 20.70 5.77 8.75 8.51 22.61 14.03 18.55 4.66 10.46 14.84 21.00 23.04 15.38 8.94 19.55 20.99 4.71 6.80 23.19 70 E12a_E13a KnownJunction 0 10.37 5.92 18.10 37.59 16.64 9.82 8.35 5.67 16.90 8.89 31.43 0.00 0.00 7.53 28.06 36.49 4.39 5.10 33.79 11.25 0.00 4.84 0.00 71 I12 Intron 0 30.92 29.71 29.35 30.74 40.51 12.42 41.66 42.76 19.56 24.06 16.43 15.80 8.06 6.33 11.99 18.16 10.96 18.54 16.50 13.28 2.63 9.41 14.43 72 I12_AR1 ActiveIntronRegion 0 38.95 28.40 14.25 13.15 36.57 8.43 48.99 17.31 17.16 13.58 14.04 6.15 4.94 5.93 11.15 11.37 9.96 14.46 23.02 12.88 1.70 12.06 12.83 73 I12_SR2 SilentIntronRegion 1 46.92 39.99 25.73 25.67 50.39 9.17 78.11 35.15 24.70 23.13 17.40 4.33 17.98 7.04 34.82 25.76 19.81 20.33 38.22 28.01 2.20 10.76 33.28 74 I12_AR2 ActiveIntronRegion 0 29.29 29.84 32.19 34.06 41.15 13.23 39.81 47.56 19.95 26.02 16.89 17.78 8.46 6.41 11.75 19.28 11.01 19.30 14.98 13.12 2.82 8.94 14.41 75 ER13a ExonRegion 0 223.23 313.27 517.24 329.67 281.79 227.65 243.42 435.71 296.79 519.19 283.20 136.72 55.84 230.07 227.70 283.14 169.94 282.68 436.59 332.68 131.19 146.04 189.28 76 E13_Da NovelBoundary 0 123.80 108.73 96.63 83.37 91.09 62.69 43.81 140.72 167.82 98.40 23.69 18.01 32.14 40.50 49.57 62.97 62.83 101.31 12.71 62.64 56.71 27.49 55.40 77 E13a_E14b KnownJunction 0 221.97 314.88 639.81 352.67 279.20 228.28 198.03 417.89 222.39 477.69 216.32 126.04 39.77 163.99 230.18 219.69 165.03 252.20 400.48 254.26 77.65 113.53 158.18 78 I13 Intron 0 121.67 89.69 86.38 95.34 68.57 69.43 46.20 103.14 146.83 110.57 53.15 23.59 11.00 58.08 47.53 63.91 33.80 81.11 52.29 64.18 39.77 41.02 77.92 79 I13_AR1 ActiveIntronRegion 1 121.94 89.89 86.59 95.57 68.73 69.59 46.31 103.38 147.18 110.83 53.28 23.64 11.02 58.22 47.64 64.06 33.87 81.31 52.41 64.33 39.86 41.12 78.11 80 E14_Aa NovelBoundary 0 257.68 127.48 117.86 150.50 117.32 70.02 59.84 124.00 233.76 114.38 77.39 70.37 47.07 78.11 49.57 93.99 41.70 95.96 45.46 88.01 54.80 38.88 105.59 81 ER14a ExonRegion 1 77.03 52.56 72.33 56.21 68.03 37.29 37.43 52.80 68.87 51.78 36.08 42.90 4.26 63.00 38.33 53.41 22.61 40.54 53.77 41.65 16.83 19.00 48.14 82 E14_Ab KnownBoundary 1 228.11 113.27 182.43 177.43 180.22 67.40 88.06 178.30 209.52 152.52 84.71 104.43 17.37 131.56 62.67 112.02 45.91 93.10 105.51 81.62 44.36 40.29 119.34 83 ER14b ExonRegion 0 318.70 398.58 570.67 385.36 358.41 249.87 252.62 473.17 455.15 566.89 370.37 170.62 56.18 243.42 283.09 268.68 220.53 322.41 326.98 342.10 153.05 155.28 252.08 84 E14a_E15a KnownJunction 1 498.68 455.31 666.18 489.08 375.30 263.71 349.15 539.59 517.21 660.83 352.72 176.16 26.62 234.27 274.55 255.23 185.69 291.25 297.23 340.55 144.31 119.34 226.55 85 ER15a ExonRegion 0 377.32 347.82 651.04 443.96 245.56 190.13 218.37 540.13 513.53 600.82 345.88 176.66 60.38 248.14 315.01 249.88 223.37 239.34 310.17 350.34 138.95 163.75 229.21 86 E15a_E16a KnownJunction 0 419.70 282.19 640.69 480.09 415.37 200.74 239.58 480.20 492.18 570.12 265.96 172.71 58.44 205.25 252.92 149.19 156.80 225.17 276.06 364.97 121.08 111.20 168.25 87 ER16a ExonRegion 0 183.88 171.37 314.86 223.42 147.92 127.50 105.69 285.19 264.79 306.91 185.92 64.86 17.51 103.46 164.19 99.24 84.80 167.82 185.85 223.71 57.91 79.99 90.31 88 IG24_SR1 SilentIntergenicRegion 0 36.35 68.58 49.06 29.56 78.73 57.43 54.89 89.76 59.03 83.96 1.35 2.31 2.64 1.62 1.60 1.85 6.36 50.01 91.99 70.66 3.87 6.85 11.96 89 IG24_SR2 SilentIntergenicRegion 0 27.50 294.28 152.79 122.19 162.41 116.51 133.14 265.05 170.49 235.93 3.64 4.07 3.08 3.39 4.78 6.42 6.13 105.10 127.92 144.59 6.19 10.83 17.51 90 IG24_AR1 ActiveIntergenicRegion 0 18.58 81.72 143.60 85.59 81.83 89.07 55.70 161.47 94.37 140.93 2.10 0.48 0.00 1.60 0.60 2.82 3.56 92.27 86.90 99.15 1.49 4.80 11.92 91 IG24_SR3 SilentIntergenicRegion 0 6.98 19.52 24.02 11.93 16.99 65.01 36.28 38.37 23.03 26.49 0.00 0.00 0.00 1.38 0.00 0.00 0.33 17.18 31.38 18.72 0.00 0.00 0.59 92 IG24_AR2 ActiveIntergenicRegion 0 24.30 96.31 108.14 81.77 82.97 33.31 43.44 177.27 96.21 137.74 1.94 2.33 0.48 1.44 1.65 2.61 2.07 47.99 54.68 114.17 1.93 8.09 13.62