Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MFSD11 Gene 0 84.81 139.51 141.35 130.57 239.49 150.73 145.86 164.45 229.28 160.35 119.93 79.77 83.07 57.26 82.73 76.15 63.48 70.43 103.19 122.06 71.50 61.61 68.60 2 336509 Transcript 0 76.34 164.93 131.23 133.28 262.31 171.25 204.04 148.14 261.14 170.59 143.92 95.60 159.78 95.38 89.09 123.78 84.05 94.29 131.82 159.07 102.96 73.06 88.42 3 355954 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 4 IG7 Intergenic 0 6.14 10.40 35.33 16.84 12.57 12.93 18.12 15.66 19.58 22.44 17.90 0.00 2.67 10.29 14.93 9.46 12.77 22.46 19.37 27.64 5.48 5.18 7.71 5 IG7_AR1 ActiveIntergenicRegion 0 6.18 10.46 35.53 16.93 12.64 13.00 18.20 15.75 19.68 22.57 18.00 0.00 2.68 10.34 14.97 9.51 12.84 22.59 19.48 27.79 5.51 5.21 7.75 6 ER1a ExonRegion 1 7.22 18.25 28.68 6.26 18.72 10.70 19.61 11.94 9.80 18.98 49.44 0.99 5.38 11.04 15.77 9.11 19.30 26.32 32.90 34.45 11.67 2.35 10.69 7 E1a_E2a KnownJunction 0 0.00 0.00 1.83 1.43 0.00 0.00 1.68 4.56 3.10 2.82 12.37 0.00 0.00 9.48 4.45 0.00 0.00 2.57 0.00 9.08 0.00 0.00 0.00 8 I1 Intron 0 20.61 18.24 25.97 10.41 31.20 27.73 26.30 24.09 29.25 29.13 20.81 8.68 4.98 15.87 13.67 24.37 19.47 25.07 29.79 37.62 29.07 16.29 28.98 9 I1_AR1 ActiveIntronRegion 0 20.72 18.33 26.10 10.46 31.36 27.87 26.44 24.21 29.40 29.28 20.92 8.72 5.01 15.95 13.73 24.49 19.56 25.20 29.94 37.81 29.22 16.37 29.12 10 E2_Aa NovelBoundary 0 30.45 12.50 61.74 26.97 34.13 29.64 39.39 61.53 56.51 60.52 38.59 19.21 27.76 13.36 18.54 19.65 13.93 41.62 35.67 76.83 51.77 14.82 32.52 11 ER2a ExonRegion 0 21.15 80.75 106.34 96.76 204.17 145.97 133.28 154.70 183.15 147.60 129.25 80.00 61.14 57.86 72.03 88.93 84.83 70.92 104.41 123.07 82.01 73.95 81.29 12 E2_Da NovelBoundary 0 42.97 9.08 56.41 23.94 40.49 7.72 14.84 18.69 10.91 19.69 19.69 6.15 0.00 2.24 0.00 19.74 8.04 20.40 22.40 18.79 0.00 5.45 4.35 13 E2a_E3a KnownJunction 1 34.52 143.72 161.53 163.28 345.59 184.61 163.76 185.70 285.79 217.50 217.48 55.82 89.44 111.84 118.67 132.44 80.13 125.31 159.63 160.69 88.47 80.71 103.37 14 ER3a ExonRegion 0 20.22 95.98 163.83 161.70 150.46 111.11 95.44 192.35 291.35 216.17 166.19 53.42 102.43 68.79 60.72 81.79 92.07 61.90 113.25 157.52 83.62 78.58 70.79 15 E3a_E4a KnownJunction 1 13.19 66.11 179.83 169.54 65.79 93.58 85.63 227.10 284.43 217.80 107.92 58.67 101.13 32.90 54.14 38.88 114.35 29.39 70.68 186.51 54.24 82.18 43.54 16 ER4a ExonRegion 0 57.87 167.26 152.73 150.54 164.46 147.21 137.97 179.95 283.42 173.73 162.67 151.05 141.66 72.21 73.69 94.25 107.40 83.08 120.01 171.00 99.55 81.76 81.63 17 E4a_E5a KnownJunction 0 122.10 187.60 141.51 135.05 280.31 129.70 233.00 195.02 285.12 191.36 173.31 185.01 168.98 102.71 77.26 109.12 109.58 116.07 146.07 142.79 115.28 92.22 100.64 18 ER5a ExonRegion 0 72.99 156.64 142.62 144.38 270.75 148.84 203.56 162.56 280.08 173.68 164.34 99.69 129.21 76.82 86.17 96.74 94.41 94.12 117.34 170.77 135.86 80.76 78.08 19 E5a_E6a KnownJunction 0 121.65 171.48 185.39 158.45 324.70 182.05 234.81 160.80 314.35 192.63 161.88 144.35 180.67 95.83 72.56 127.49 74.52 121.50 140.24 178.39 128.56 96.81 98.42 20 E5a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 21 ER6a ExonRegion 0 48.99 154.11 127.70 141.01 250.50 160.43 180.62 142.37 279.98 172.75 151.74 132.52 184.02 94.85 82.19 119.99 101.34 107.17 146.76 163.35 128.54 73.01 98.36 22 E6a_E7a KnownJunction 0 51.94 152.34 109.28 126.39 234.64 203.97 170.60 123.47 226.94 145.11 131.35 74.87 122.07 97.06 110.88 123.13 72.28 100.77 88.10 161.39 96.19 52.17 101.75 23 E6a_E8a NovelJunction 0 0.00 9.01 9.88 12.15 33.11 19.02 16.43 34.17 29.28 14.48 17.00 6.30 0.00 6.83 10.26 4.36 0.00 10.24 9.60 15.15 2.90 0.00 8.71 24 ER7a ExonRegion 0 53.13 149.62 111.47 117.28 215.78 174.30 180.57 134.85 219.41 152.36 130.91 81.38 121.38 83.38 83.01 118.48 71.67 83.18 121.91 138.19 82.92 55.58 72.52 25 E7a_E8a KnownJunction 1 106.02 197.07 122.32 123.26 285.91 135.49 253.58 179.21 265.04 190.10 143.72 44.86 190.73 105.77 96.79 129.79 100.42 58.82 162.08 154.04 78.58 87.75 71.02 26 ER8a ExonRegion 0 74.52 166.25 112.25 122.26 193.63 137.29 171.21 158.95 262.83 179.55 167.62 95.96 121.29 81.17 75.69 106.61 86.67 65.58 157.31 145.90 67.72 71.97 83.58 27 E8a_E9a KnownJunction 0 131.73 135.37 98.02 66.13 186.84 87.28 122.46 141.58 222.60 162.68 158.78 146.75 86.84 77.05 42.40 95.87 60.21 50.03 127.25 127.96 64.56 55.78 97.40 28 I8 Intron 0 14.91 21.36 16.90 14.96 34.19 19.68 30.25 17.79 19.52 16.40 6.08 6.98 7.98 2.49 5.68 8.64 7.03 6.77 10.53 21.17 3.24 1.04 3.80 29 I8_SR1 SilentIntronRegion 0 2.48 21.89 8.54 13.73 20.77 13.05 27.63 19.30 24.47 19.46 8.31 4.33 11.01 4.05 9.79 17.32 11.74 9.64 4.36 27.81 4.42 1.48 6.12 30 I8_AR2 ActiveIntronRegion 0 17.71 41.80 22.45 20.79 40.07 23.42 46.34 24.86 31.03 26.93 9.32 14.78 15.64 3.81 9.25 11.82 14.05 10.52 16.55 43.62 6.68 1.68 5.79 31 I8_SR4 SilentIntronRegion 0 51.78 38.03 17.53 18.05 65.53 23.82 47.10 24.11 26.05 12.64 4.60 4.35 9.49 3.90 8.20 7.01 3.18 5.51 12.25 22.45 4.24 1.00 1.41 32 I8 Intron 0 21.76 30.37 31.44 33.81 52.62 21.55 31.55 33.84 40.25 33.47 6.31 7.88 14.36 3.96 8.23 9.22 8.08 6.68 10.14 25.70 3.78 2.55 5.27 33 I8_SR1 SilentIntronRegion 0 21.80 30.42 31.49 33.86 52.70 21.58 31.60 33.89 40.32 33.53 6.32 7.89 14.39 3.97 8.24 9.23 8.09 6.69 10.15 25.74 3.78 2.56 5.28 34 E9_Aa NovelBoundary 0 39.93 88.21 27.53 36.49 47.11 21.12 50.83 22.96 26.27 25.17 9.48 25.06 13.64 4.94 0.00 12.48 7.67 5.68 4.61 26.14 3.09 0.00 3.67 35 ER9a ExonRegion 1 110.58 129.41 85.30 69.81 226.66 147.11 144.51 143.04 255.40 166.44 186.74 131.47 56.05 81.25 49.96 101.92 82.12 48.09 118.56 127.14 67.29 61.79 75.92 36 E9_Da NovelBoundary 0 32.82 72.42 50.65 82.04 93.12 25.84 61.74 52.62 57.49 53.03 11.16 6.30 12.34 12.18 27.07 33.67 9.44 17.33 18.26 35.22 5.31 8.21 7.68 37 E9a_E10a KnownJunction 0 129.06 179.38 80.72 77.35 331.32 223.45 202.71 134.76 247.62 152.58 195.05 129.79 74.02 73.28 69.84 122.45 103.23 35.53 128.57 134.29 60.79 69.87 69.14 38 I9 Intron 0 22.78 28.97 24.88 31.47 39.60 18.84 29.31 26.30 33.94 25.86 6.06 11.06 13.85 4.23 9.31 10.77 7.15 7.30 10.38 23.81 7.08 3.99 9.43 39 I9_AR1 ActiveIntronRegion 0 30.84 29.19 36.78 43.62 31.53 12.87 31.89 30.20 35.13 39.57 15.61 17.24 4.81 9.07 11.71 17.91 15.82 10.08 11.84 23.55 9.21 5.75 19.62 40 I9_AR3 ActiveIntronRegion 0 23.18 29.15 41.70 43.43 60.02 29.29 44.07 42.79 55.22 35.63 10.80 12.34 17.05 5.13 14.46 23.81 13.86 13.94 16.12 43.70 11.68 2.47 14.75 41 I9_SR3 SilentIntronRegion 0 25.80 33.49 23.46 32.23 43.03 19.77 31.43 27.00 36.41 27.82 5.84 13.32 17.68 4.51 10.03 9.49 5.47 6.46 10.33 25.30 6.63 4.93 9.50 42 I9_AR4 ActiveIntronRegion 0 70.43 44.01 25.27 39.25 55.68 20.14 31.79 37.74 48.00 36.71 6.69 10.76 30.85 3.32 6.87 4.39 6.00 1.68 6.93 27.09 2.14 8.77 11.29 43 E10_Aa NovelBoundary 0 46.23 66.17 28.89 29.90 67.91 44.41 73.09 29.78 25.69 22.30 6.84 18.16 6.01 4.94 8.90 3.50 0.00 0.00 0.00 12.46 0.00 4.84 3.24 44 ER10a ExonRegion 0 122.02 208.04 132.19 113.95 390.01 223.00 223.41 191.52 286.27 178.55 174.31 125.75 122.58 78.70 78.99 86.78 94.18 56.27 142.96 152.13 60.54 75.92 93.39 45 E10a_E11a KnownJunction 0 134.99 202.27 147.36 151.00 388.79 240.66 242.01 251.54 310.47 193.97 173.52 81.78 133.27 104.19 97.66 70.07 67.60 45.93 180.33 159.09 60.23 67.85 56.94 46 ER11a ExonRegion 0 140.51 182.52 159.52 164.09 362.69 238.54 227.43 236.24 334.14 223.71 180.13 163.56 125.59 76.35 90.74 87.68 93.39 57.31 127.19 146.54 78.60 77.07 79.24 47 E11a_E12a KnownJunction 1 144.25 208.98 181.10 190.42 419.52 331.97 222.40 252.32 366.69 243.29 121.14 143.30 6.01 69.22 103.22 107.66 64.89 53.47 103.81 159.86 110.95 81.69 114.64 48 ER12a ExonRegion 0 131.13 210.71 244.75 206.01 341.46 280.57 226.96 260.01 350.88 253.56 201.25 104.20 93.10 83.54 115.32 132.01 91.73 109.56 152.88 151.10 137.83 87.00 117.21 49 E12a_E13a KnownJunction 1 181.37 220.22 240.38 188.99 315.70 276.55 209.64 258.31 338.31 252.53 206.05 137.44 53.57 61.57 124.24 122.87 52.27 83.57 153.13 173.98 113.49 98.77 99.45 50 ER13a ExonRegion 0 150.19 210.85 228.14 161.92 277.53 207.88 176.98 221.01 282.30 208.89 182.62 76.18 91.87 80.74 119.06 99.78 75.12 100.34 152.69 139.39 123.46 69.26 115.85 51 E13a_E14a KnownJunction 0 261.01 245.81 249.07 187.49 337.78 220.84 157.97 206.73 229.02 186.72 169.10 123.19 101.78 76.11 138.70 80.66 59.28 116.69 100.61 133.78 88.09 41.94 92.88 52 I13 Intron 0 15.83 29.84 24.30 17.36 28.08 13.90 20.71 20.02 26.99 18.76 8.83 6.04 12.03 6.93 12.02 10.97 3.53 8.84 8.97 25.42 6.42 3.04 5.42 53 I13_SR1 SilentIntronRegion 0 17.52 27.62 19.95 19.51 32.80 13.97 21.49 16.64 28.34 18.67 6.72 7.80 15.26 8.04 12.94 9.35 2.19 5.79 12.66 24.66 2.55 4.48 4.38 54 I13_SR2 SilentIntronRegion 0 14.05 34.90 31.97 15.12 22.46 14.51 20.32 26.05 26.41 19.81 12.50 3.74 7.89 5.60 11.04 13.82 5.62 13.94 3.96 27.92 12.43 1.04 7.31 55 E14_Aa NovelBoundary 0 66.09 54.86 52.95 26.44 88.96 47.76 53.79 43.25 47.31 29.68 19.74 12.00 6.82 7.24 23.49 12.48 18.42 24.50 9.13 43.78 9.14 0.00 0.00 56 ER14a ExonRegion 0 95.69 132.47 143.13 136.45 254.40 134.42 128.42 161.43 209.36 147.69 76.14 60.56 63.73 41.59 89.25 56.34 40.15 64.98 79.07 106.65 49.02 55.52 52.38 57 IG8_SR1 SilentIntergenicRegion 0 34.88 75.95 69.05 69.77 218.75 76.40 75.21 112.95 134.00 80.98 10.46 12.75 13.62 6.38 12.30 13.99 11.91 18.45 38.48 35.22 7.61 7.85 13.12 58 IG8_AR2 ActiveIntergenicRegion 0 55.01 97.18 104.10 99.32 134.22 73.03 64.75 145.77 186.45 121.07 22.96 11.92 8.87 8.16 19.58 27.82 14.30 49.93 48.96 54.70 25.55 10.77 22.98 59 IG8_SR2 SilentIntergenicRegion 0 2.62 11.45 8.57 12.04 25.89 27.47 19.02 9.65 14.96 9.08 2.98 1.35 0.00 1.67 2.56 4.65 5.12 0.00 5.94 6.66 2.74 0.00 0.00 60 IG8_AR4 ActiveIntergenicRegion 0 20.05 2.09 20.03 18.29 42.18 18.97 27.42 47.08 54.44 29.16 1.42 10.25 11.85 1.32 1.30 26.67 5.13 10.99 18.44 6.44 1.80 4.22 12.52 61 IG8_SR3 SilentIntergenicRegion 0 7.18 10.51 11.30 10.22 28.28 11.44 10.07 16.94 26.68 15.05 2.24 2.57 2.67 0.75 1.95 2.84 1.14 2.33 6.96 6.46 1.61 0.82 2.51