Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AMZ2 Gene 0 201.26 232.58 333.99 249.38 289.51 310.63 168.03 237.08 334.43 385.99 170.24 285.41 296.57 204.93 243.47 206.90 194.72 107.06 256.89 220.35 139.77 124.24 83.98 2 359783 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 392720 Transcript 1 34.67 59.40 27.17 20.88 146.43 257.35 40.85 24.89 27.86 75.29 41.85 0.00 19.97 62.57 119.79 152.78 57.60 55.67 121.51 60.85 62.52 14.14 41.23 4 359904 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 455065 Transcript 0 14.00 18.55 1.09 4.63 67.91 72.63 12.72 6.61 7.58 16.73 14.95 0.00 0.00 27.37 34.12 53.49 17.77 13.06 42.92 14.76 8.71 7.84 33.63 6 445412 Transcript 0 3.63 17.89 2.19 3.73 3.65 48.67 8.97 0.00 3.15 1.05 2.05 0.00 0.00 11.89 22.99 30.50 8.42 1.62 14.40 2.68 0.00 2.76 4.35 7 440663 Transcript 0 6.67 9.74 1.12 1.37 42.95 97.50 16.87 0.00 0.00 6.37 7.11 0.00 0.00 4.59 15.45 15.64 0.00 3.69 20.33 9.33 3.09 2.33 0.00 8 407549 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 402427 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 392721 Transcript 0 0.18 0.34 0.10 0.23 0.00 0.00 0.22 0.00 0.00 0.10 0.16 2.16 0.00 0.00 0.48 0.00 0.28 0.00 0.00 0.18 0.37 0.00 0.00 11 ER1a ExonRegion 0 3.89 9.38 1.58 4.42 21.57 75.30 10.32 3.10 4.51 10.79 4.34 0.00 2.11 5.27 13.44 28.51 7.68 5.51 18.66 6.17 10.88 1.74 12.83 12 E1_Da KnownBoundary 0 12.15 24.14 5.50 11.72 62.99 198.52 32.19 6.57 11.83 22.89 11.74 0.00 13.96 24.78 78.50 63.40 11.22 19.48 52.05 11.19 24.09 10.96 31.76 13 E1a_E1c KnownJunction 0 6.67 9.74 1.12 1.37 42.95 97.50 16.87 0.00 0.00 6.37 7.11 0.00 0.00 4.59 15.45 15.64 0.00 3.69 20.33 9.33 3.09 2.33 0.00 14 E1a_E1d KnownJunction 0 3.63 17.89 2.19 3.73 3.65 48.67 8.97 0.00 3.15 1.05 2.05 0.00 0.00 11.89 22.99 30.50 8.42 1.62 14.40 2.68 0.00 2.76 4.35 15 ER1b ExonRegion 1 22.22 46.43 8.58 17.04 86.96 282.10 43.03 10.37 22.44 38.23 24.16 0.00 4.69 52.78 86.55 108.48 33.56 28.33 77.51 25.89 34.52 11.81 38.18 16 E1_Dc KnownBoundary 0 10.52 9.34 5.50 3.40 11.63 10.11 10.38 9.41 5.35 9.67 12.00 0.00 0.00 9.06 9.89 7.86 13.09 7.54 4.24 8.44 2.90 6.25 0.00 17 E1c_E1c KnownJunction 1 34.67 59.40 27.17 20.88 146.43 257.35 40.85 24.89 27.86 75.29 41.85 0.00 19.97 62.57 119.79 152.78 57.60 55.67 121.51 60.85 62.52 14.14 41.23 18 E1c_E1d KnownJunction 0 14.00 18.55 1.09 4.63 67.91 72.63 12.72 6.61 7.58 16.73 14.95 0.00 0.00 27.37 34.12 53.49 17.77 13.06 42.92 14.76 8.71 7.84 33.63 19 ER1c ExonRegion 1 22.40 41.52 8.99 13.63 82.95 219.29 33.76 13.40 21.20 42.91 23.84 0.00 4.69 48.05 71.56 90.15 32.46 28.64 65.57 21.81 40.03 13.89 35.48 20 ER1d ExonRegion 1 34.00 65.33 25.73 22.15 149.34 305.10 48.66 27.76 29.64 76.34 50.74 0.00 6.45 77.55 125.12 173.50 61.07 48.73 112.28 59.31 58.26 22.92 57.45 21 ER1e ExonRegion 0 67.00 56.49 119.09 70.12 42.87 152.56 55.71 84.94 141.83 172.72 67.01 35.14 39.59 93.32 101.41 121.56 89.83 109.15 141.04 119.75 98.27 46.98 53.71 22 E1_Ac KnownBoundary 0 103.80 39.73 114.78 91.40 95.76 256.33 112.75 40.33 156.13 134.20 76.44 71.87 86.20 97.59 118.30 116.64 76.48 67.44 228.43 141.26 68.08 79.54 75.03 23 E1_Ad KnownBoundary 0 48.38 45.45 97.42 85.00 163.75 148.55 72.29 80.14 126.97 114.51 27.53 32.56 43.99 41.09 29.67 60.24 34.13 56.29 102.50 73.25 55.23 14.33 27.57 24 ER1f ExonRegion 0 188.90 161.67 262.54 207.16 395.34 716.56 221.76 163.77 313.10 364.43 172.99 149.37 221.60 310.61 348.15 402.72 199.70 199.10 476.21 269.15 200.54 138.55 154.17 25 ER1g ExonRegion 0 153.15 183.06 311.10 205.17 447.99 498.58 203.15 220.02 383.43 429.66 200.93 146.78 231.81 216.33 254.41 453.37 303.68 212.67 537.13 304.15 178.93 147.52 173.17 26 E1d_E2a KnownJunction 0 183.88 175.43 369.18 188.49 255.69 371.04 162.12 222.70 461.08 444.94 207.05 219.07 357.12 162.81 168.24 394.77 249.18 198.11 516.34 324.76 185.46 130.49 144.18 27 E2_Aa NovelBoundary 0 98.09 18.22 19.81 28.13 39.39 18.68 36.96 45.55 38.95 24.23 4.84 31.66 25.81 14.72 0.00 15.12 8.51 1.74 12.33 12.27 3.15 50.09 16.22 28 ER2a ExonRegion 0 197.05 299.81 425.73 309.58 403.74 516.50 240.76 333.46 534.91 554.88 316.60 405.67 587.15 343.22 324.98 424.58 366.42 202.48 609.07 351.70 287.56 227.35 161.50 29 E2a_E3a KnownJunction 0 252.12 498.33 411.37 319.84 478.10 499.20 328.61 262.13 432.75 515.48 218.53 414.29 673.17 271.77 325.48 148.85 187.75 63.76 229.47 285.84 132.70 125.90 53.69 30 E2a_E4a KnownJunction 0 3.63 21.64 14.84 22.21 3.90 11.02 0.00 0.00 2.60 11.34 0.00 0.00 6.82 0.00 0.00 0.00 0.00 10.94 12.99 23.59 0.00 2.51 4.27 31 ER3a ExonRegion 0 505.13 522.29 447.32 376.04 517.68 440.27 320.21 300.85 439.91 529.20 257.85 590.23 776.58 244.63 293.28 215.96 270.05 62.71 260.94 273.99 98.26 189.31 85.08 32 E3a_E4a KnownJunction 0 454.90 461.30 374.82 374.48 513.16 395.68 294.70 255.44 347.22 454.72 164.94 352.31 397.38 129.61 179.12 132.27 181.86 39.88 158.22 187.09 70.55 86.58 57.96 33 ER4a ExonRegion 0 290.73 509.58 508.67 461.30 501.38 534.86 343.09 349.74 497.66 536.47 270.83 695.90 809.19 279.95 324.13 237.82 280.19 93.02 278.36 275.74 153.17 192.20 79.49 34 E4a_E5a KnownJunction 1 248.41 492.08 523.75 472.23 560.87 407.27 265.29 365.19 536.89 532.11 236.95 745.59 700.44 354.05 435.50 234.64 267.60 120.05 259.96 295.23 174.89 188.97 95.61 35 ER5a ExonRegion 0 375.81 458.52 687.56 539.37 617.66 451.25 298.84 417.86 562.29 653.54 289.98 516.84 369.45 347.32 413.99 266.84 278.26 125.53 322.25 334.18 183.73 164.65 114.98 36 E5a_E6a KnownJunction 0 920.09 614.63 558.35 420.19 1212.31 762.97 545.06 413.57 505.43 616.43 281.97 614.75 556.13 411.44 518.33 273.35 366.15 133.07 356.15 296.90 221.35 190.68 148.96 37 ER6a ExonRegion 0 395.21 323.86 608.95 413.58 422.96 380.73 217.22 374.37 447.51 554.12 198.36 460.76 307.26 321.96 435.02 243.65 259.50 125.82 278.93 303.33 212.30 145.15 106.12 38 E6a_E7a KnownJunction 0 191.74 270.08 509.06 284.75 281.83 280.52 162.56 367.57 425.17 467.64 208.37 236.63 132.46 327.92 450.71 194.82 261.90 126.06 240.57 349.12 178.04 165.70 152.03 39 ER7a ExonRegion 0 132.68 152.31 336.79 240.38 268.60 198.84 118.21 300.00 350.59 420.72 132.48 227.81 121.72 184.04 281.99 126.19 144.78 54.03 141.42 217.21 90.45 132.51 57.84 40 E7_Da KnownBoundary 0 95.20 68.94 151.86 115.94 90.07 86.54 60.77 124.17 152.20 215.97 18.90 62.27 47.89 41.79 88.39 34.86 20.29 12.68 54.12 46.02 8.22 30.56 7.77 41 ER7b ExonRegion 1 58.33 47.49 72.74 77.25 44.69 35.31 25.42 62.41 79.02 110.82 11.81 73.32 13.50 22.88 53.02 16.75 8.81 3.74 25.20 38.98 7.17 21.96 7.84 42 Ix Intron 0 13.53 15.74 28.32 11.41 11.19 7.95 5.19 3.11 6.06 2.23 4.47 29.58 43.84 9.86 11.83 6.94 5.06 2.56 8.08 9.16 0.86 73.26 26.15 43 Ix_AR1 ActiveIntronRegion 0 43.00 35.02 41.71 18.86 27.37 16.05 9.45 9.05 11.05 5.68 14.49 59.36 89.49 27.13 39.41 19.30 10.95 3.96 15.07 13.73 1.55 233.05 83.49 44 Ix_AR2 ActiveIntronRegion 0 49.00 32.81 24.80 22.69 44.31 15.95 10.73 7.56 11.53 4.58 10.68 153.36 173.64 34.04 36.23 12.87 14.44 0.76 7.17 7.69 1.45 315.53 62.00 45 Ix_SR2 SilentIntronRegion 0 11.91 24.16 21.17 24.24 31.11 16.59 9.68 2.78 6.31 1.44 6.20 150.68 175.97 26.88 23.27 8.39 12.23 0.00 5.25 12.64 0.00 260.83 40.48 46 ER8a ExonRegion 0 0.18 0.34 0.10 0.23 0.00 0.00 0.22 0.00 0.00 0.10 0.16 2.16 0.00 0.00 0.48 0.00 0.28 0.00 0.00 0.18 0.37 0.00 0.00