Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPRC5C Gene 0 4.70 0.75 14.48 3.50 1.49 1.31 2.45 7.16 16.39 4.51 41.10 2.50 3.46 34.18 37.92 3.70 11.24 0.05 5.43 0.25 0.09 11.62 17.31 2 392627 Transcript 0 0.18 0.00 0.42 0.17 0.00 0.15 0.76 0.43 1.70 0.00 9.62 0.00 0.00 6.58 3.04 0.25 1.71 0.23 0.26 0.00 0.00 1.72 4.88 3 342648 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 481232 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 430649 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 420926 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 262616 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 392629 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.03 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 392628 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 417745 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 482723 Transcript 0 3.12 0.00 1.55 0.94 0.90 0.24 0.94 1.46 2.46 1.34 28.89 1.39 1.12 22.76 21.66 4.89 4.79 0.00 0.47 0.15 0.00 0.33 1.55 12 ER1a ExonRegion 0 0.18 0.00 0.42 0.17 0.00 0.15 0.76 0.43 1.70 0.00 9.62 0.00 0.00 6.58 3.04 0.25 1.71 0.23 0.26 0.00 0.00 1.72 4.88 13 E1_Ab KnownBoundary 0 0.00 0.00 4.35 0.00 0.00 0.00 0.00 2.51 1.27 0.00 19.64 0.00 0.00 11.95 0.00 0.00 8.32 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1b ExonRegion 0 0.32 0.18 5.26 2.62 0.00 0.65 0.95 1.46 5.23 2.31 14.95 0.97 0.00 10.85 6.49 0.54 1.42 0.25 2.97 0.00 0.40 6.73 12.69 15 E1_Ac KnownBoundary 0 3.63 0.00 18.27 7.36 0.00 8.06 1.85 4.56 17.82 3.33 26.32 0.00 0.00 30.43 10.75 0.00 0.00 0.00 21.74 0.00 0.00 24.98 35.94 16 ER1c ExonRegion 0 5.62 0.00 17.96 4.56 2.16 8.46 1.17 4.52 18.43 2.96 43.56 0.00 0.00 26.74 24.55 0.00 5.33 0.00 19.72 1.23 0.00 17.39 35.58 17 E1a_E3a KnownJunction 1 38.08 0.00 32.23 1.90 7.72 10.16 20.01 7.23 32.84 4.78 96.97 0.00 0.00 31.49 120.53 8.20 54.04 0.00 44.61 2.68 0.00 19.66 81.78 18 ER1d ExonRegion 1 15.24 0.00 26.42 4.03 5.57 8.51 9.85 4.42 24.46 3.72 82.26 0.69 0.00 28.00 89.59 4.04 34.99 0.00 28.92 2.13 0.00 14.83 52.98 19 I1_AR1 ActiveIntronRegion 0 0.31 0.27 0.00 0.62 0.00 0.00 0.00 0.39 1.97 0.00 9.57 1.76 0.00 5.57 6.31 0.46 4.55 0.00 0.98 0.00 0.00 0.64 3.60 20 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.06 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3a ExonRegion 0 13.98 0.00 34.09 1.36 5.19 4.17 9.47 7.75 24.96 4.52 80.83 4.33 0.00 43.75 87.57 5.94 44.21 0.00 28.96 0.71 0.00 23.17 45.03 23 E3_Ab KnownBoundary 0 10.08 0.00 39.35 3.56 7.81 0.00 6.32 10.88 22.92 4.62 62.33 5.55 0.00 55.09 46.48 0.00 30.57 0.00 23.53 0.00 0.00 31.17 22.79 24 ER3b ExonRegion 0 4.31 0.00 25.50 2.03 0.75 3.86 1.83 11.92 20.63 4.69 40.15 0.38 1.07 36.98 23.41 2.76 18.24 0.00 5.76 0.00 0.00 19.48 16.38 25 E3_Da KnownBoundary 0 0.00 0.00 16.91 5.29 0.00 2.73 3.44 20.78 27.17 5.48 44.54 0.00 7.14 44.85 13.35 0.00 22.44 0.00 4.14 0.00 0.00 17.57 20.32 26 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3c ExonRegion 0 6.11 0.98 33.22 6.56 1.29 1.53 3.02 14.10 31.91 7.89 80.36 0.00 9.31 59.86 72.31 5.64 30.58 0.00 19.20 1.49 0.46 32.82 52.78 28 E3_Db KnownBoundary 0 10.74 3.35 29.09 8.26 0.00 2.33 13.07 20.45 35.33 15.04 84.81 0.00 19.80 42.50 56.00 7.35 35.16 0.00 8.28 0.00 0.00 32.27 18.95 29 E3b_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 10.75 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 30 ER3d ExonRegion 0 9.91 2.29 37.96 9.74 2.29 3.73 5.82 18.24 47.92 9.67 80.57 6.57 7.04 78.00 76.74 10.80 24.26 0.00 14.41 0.51 0.19 31.15 47.51 31 E3_Ac KnownBoundary 0 15.11 8.62 38.20 11.32 0.00 0.00 0.00 26.25 47.34 10.80 145.41 6.30 8.28 78.52 66.88 15.12 16.64 2.03 19.20 0.00 0.00 29.33 60.44 32 ER3e ExonRegion 0 9.55 6.62 46.95 11.59 3.08 2.30 9.60 30.14 49.39 17.19 124.48 9.14 8.44 93.26 104.14 6.75 40.88 0.00 24.21 0.87 0.00 36.89 71.21 33 E3c_E4b KnownJunction 0 16.82 3.35 59.61 1.43 23.85 12.44 16.43 39.18 46.24 29.63 118.77 0.00 8.12 84.47 56.37 3.25 39.46 0.00 9.41 0.00 0.00 29.64 76.06 34 E4_Aa NovelBoundary 1 6.96 0.00 2.66 2.06 3.82 0.00 4.02 0.00 1.33 0.00 100.76 0.00 0.00 35.55 95.56 15.72 18.14 0.00 0.00 0.00 0.00 0.00 0.00 35 ER4a ExonRegion 0 3.12 0.00 1.55 0.94 0.90 0.24 0.94 1.46 2.46 1.34 28.89 1.39 1.12 22.76 21.66 4.89 4.79 0.00 0.47 0.15 0.00 0.33 1.55 36 E4_Ab KnownBoundary 0 0.00 0.00 2.96 1.93 3.90 0.00 0.00 5.09 6.80 0.00 52.70 5.40 0.00 36.85 24.11 7.18 4.68 0.00 0.00 0.00 0.00 0.00 6.66 37 ER4b ExonRegion 0 28.37 2.57 61.45 12.41 9.00 3.77 12.56 30.62 58.25 25.48 189.10 8.57 11.33 126.72 137.87 8.57 58.61 0.00 18.47 0.93 0.00 39.61 64.54 38 E4a_E5a KnownJunction 0 41.93 12.23 93.31 20.48 20.88 5.79 21.33 44.98 67.91 40.86 276.28 18.91 13.47 122.32 163.92 16.92 48.62 0.00 18.64 2.62 0.00 49.17 58.05 39 ER5a ExonRegion 0 15.20 2.03 55.23 9.29 6.85 2.14 5.32 32.54 57.63 18.08 124.54 11.83 8.88 115.65 163.71 11.16 28.85 0.00 10.09 0.99 0.00 24.50 39.84 40 E5_Da KnownBoundary 0 42.38 8.42 44.26 8.42 15.45 8.18 11.31 31.46 43.89 19.29 160.94 30.31 29.06 131.26 157.74 14.10 29.92 0.00 27.95 0.00 0.00 43.60 87.75 41 E5a_E6a KnownJunction 0 7.04 0.00 0.00 0.00 0.00 0.00 0.00 2.46 6.28 0.00 11.85 0.00 6.82 11.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E5a_E7a KnownJunction 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 0.00 7.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 43 E5_Db KnownBoundary 0 17.34 11.31 40.09 7.06 25.13 11.02 4.02 21.81 32.61 4.78 88.07 0.00 0.00 84.00 166.02 8.54 13.84 0.00 8.56 2.75 0.00 31.23 22.88 44 ER5b ExonRegion 0 19.26 6.44 37.78 6.45 16.41 11.86 4.68 23.91 39.65 14.30 115.91 12.99 12.04 110.12 149.90 6.64 22.12 0.00 3.50 2.13 0.00 35.14 38.18 45 ER5c ExonRegion 0 10.03 0.87 28.31 4.42 3.08 3.04 3.98 14.18 31.53 9.83 87.16 5.66 6.69 68.53 96.70 4.37 18.36 0.00 7.17 0.06 0.00 23.49 16.97 46 ER5d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 1.93 0.00 0.00 0.00 1.45 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 47 ER6a ExonRegion 0 1.34 0.00 0.62 0.00 0.00 0.00 0.00 0.72 4.94 0.00 6.13 0.00 1.87 3.21 2.81 0.00 3.16 0.00 0.00 0.00 0.00 0.11 0.00 48 E6a_E7a KnownJunction 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 7.38 0.00 2.68 0.00 6.82 2.12 15.08 0.00 4.11 0.00 0.00 0.00 0.00 0.00 0.00 49 ER7a ExonRegion 0 0.00 0.00 1.08 1.36 0.00 0.00 0.00 1.10 5.43 0.00 9.08 0.00 2.70 6.25 8.09 0.00 8.80 0.00 0.00 0.00 0.00 5.37 0.00 50 E7_Da KnownBoundary 0 0.00 0.00 1.21 1.66 0.00 0.00 0.00 2.09 3.36 0.00 12.00 0.00 0.00 7.00 4.45 0.00 12.62 0.00 0.00 0.00 0.00 8.02 0.00 51 ER7b ExonRegion 0 1.33 0.09 1.38 1.22 0.68 0.00 0.67 0.29 1.76 0.50 4.74 0.30 2.90 6.03 4.82 0.75 2.29 0.00 0.27 0.00 0.00 1.41 1.23