Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM104 Gene 0 14.43 8.29 51.38 19.85 20.56 21.45 31.43 47.10 54.11 96.40 48.12 22.15 24.18 72.84 87.86 58.30 49.73 47.44 52.05 44.68 60.94 40.02 53.02 2 335464 Transcript 0 5.56 4.67 29.94 10.81 14.43 15.60 16.52 35.96 38.14 65.77 47.76 13.60 12.72 51.88 57.23 46.21 48.47 35.07 47.68 39.60 52.02 28.30 38.51 3 417024 Transcript 0 9.88 8.37 7.89 5.40 7.55 8.42 13.95 5.89 4.79 6.56 6.66 9.24 11.11 7.72 16.19 16.59 14.30 9.75 12.57 14.99 6.62 5.43 13.93 4 ER1a ExonRegion 0 1.03 0.74 0.00 0.00 0.00 2.86 3.04 0.00 0.00 0.00 0.80 0.00 0.00 4.36 11.18 2.61 0.00 1.08 0.00 0.00 1.72 2.54 4.01 5 E1_Ab KnownBoundary 0 15.41 2.96 4.97 0.00 0.00 9.20 13.73 5.83 2.52 5.40 4.42 0.00 0.00 15.95 18.30 15.12 3.93 1.91 12.05 4.99 15.44 18.86 14.26 6 ER1b ExonRegion 0 2.63 1.36 0.00 0.00 1.44 1.83 8.48 0.00 0.14 1.40 2.58 0.00 2.69 8.24 17.68 0.83 5.56 2.22 2.77 0.00 5.10 9.57 2.50 7 E1a_E2a KnownJunction 0 3.41 0.00 5.82 0.00 8.23 2.67 22.61 5.59 4.40 12.97 2.32 0.00 0.00 0.00 14.34 4.02 18.61 1.82 12.14 0.00 6.24 13.78 0.00 8 ER2a ExonRegion 0 2.00 0.00 6.53 1.58 2.58 2.42 10.08 4.31 8.08 14.84 20.64 0.00 3.77 8.72 11.45 3.45 19.81 4.64 6.54 11.47 31.19 6.73 6.00 9 E2a_E3a KnownJunction 0 0.00 0.00 1.30 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 0.00 0.00 0.00 0.00 10 E2a_E4a KnownJunction 1 3.11 0.00 18.24 5.16 3.99 5.28 5.39 22.67 32.90 36.32 75.28 0.00 13.64 29.37 22.25 21.96 71.53 15.13 36.05 63.98 72.96 25.66 22.19 11 E3_Aa NovelBoundary 0 3.41 0.00 4.79 4.49 3.57 10.73 30.56 0.00 10.82 10.83 2.00 6.30 0.00 5.36 0.00 11.54 7.39 2.49 13.55 6.39 0.00 0.00 0.00 12 ER3a ExonRegion 1 39.52 33.48 25.01 19.55 25.86 33.68 54.03 23.58 17.48 17.05 19.04 36.98 37.61 23.63 59.34 62.93 49.06 39.01 46.44 59.94 26.49 16.46 55.72 13 E3_Da NovelBoundary 1 2919.85 2882.58 7761.58 9298.58 3207.22 1853.93 4078.34 9705.55 8135.25 7947.43 1044.63 516.02 464.26 326.68 935.78 3108.76 2444.88 11379.04 2652.88 3789.71 1430.33 1273.66 2662.99 14 E3a_E5a KnownJunction 0 0.00 0.00 3.90 0.00 4.33 0.00 0.00 0.00 0.00 4.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I3 Intron 0 4.73 1.98 4.20 3.45 7.74 2.33 16.09 3.75 5.38 11.22 3.05 2.72 2.73 3.80 5.13 5.90 6.01 5.45 5.34 5.90 1.33 2.05 3.06 16 I3_SR1 SilentIntronRegion 0 4.73 1.98 4.20 3.45 7.74 2.33 16.09 3.75 5.39 11.22 3.05 2.72 2.73 3.80 5.13 5.90 6.01 5.45 5.34 5.90 1.33 2.06 3.06 17 ER4a ExonRegion 0 7.01 1.58 26.18 15.11 5.94 3.16 7.80 39.61 38.76 53.52 41.22 14.90 17.03 67.59 82.97 71.43 41.50 53.92 62.45 41.65 45.03 45.58 56.78 18 E4_Da NovelBoundary 0 6.08 3.09 1.83 3.73 4.24 5.11 26.98 0.00 1.59 9.51 0.00 0.00 0.00 5.36 0.00 0.00 18.14 4.15 0.00 15.53 0.00 0.00 0.00 19 E4a_E5a KnownJunction 1 3.41 6.58 28.30 9.62 12.14 11.92 18.90 39.10 39.24 66.94 69.91 0.00 0.00 46.62 52.78 38.37 70.78 36.44 31.15 52.92 59.62 11.14 21.43 20 I4_AR1 ActiveIntronRegion 0 2.04 2.44 3.36 6.79 7.31 10.49 23.84 5.78 6.69 9.74 3.78 0.56 2.22 8.08 8.70 6.83 10.69 4.79 8.78 8.74 4.31 2.29 2.46 21 E5_Aa NovelBoundary 0 15.48 8.95 4.94 3.90 23.60 7.67 16.30 4.31 0.00 24.90 7.21 0.00 0.00 4.59 20.89 7.69 0.00 5.97 0.00 14.64 5.25 0.00 8.37 22 ER5a ExonRegion 1 8.34 7.66 33.44 14.24 13.77 20.42 43.00 30.84 43.70 73.86 50.21 6.12 16.87 69.88 78.23 43.75 37.32 29.09 28.20 35.60 61.89 41.62 29.12 23 E5a_E6a KnownJunction 1 16.60 9.74 33.62 17.81 15.87 2.73 58.52 35.57 45.51 93.64 46.01 17.86 26.13 77.99 69.23 80.06 22.16 43.86 23.62 32.21 49.61 67.42 52.07 24 ER6a ExonRegion 0 29.39 8.45 43.28 25.09 29.71 19.81 37.44 62.71 63.63 122.27 66.58 32.72 18.95 89.83 111.32 75.04 50.57 68.80 77.83 77.82 87.26 56.32 85.34 25 E6_Da NovelBoundary 0 7.11 3.03 6.06 4.63 0.00 5.05 1.81 9.57 0.00 16.31 2.58 0.00 0.00 7.30 15.20 16.66 0.00 15.59 0.00 0.00 2.41 2.82 4.18 26 E6a_E7a KnownJunction 0 25.34 8.81 39.09 16.08 29.29 24.19 26.14 42.27 68.49 102.08 59.07 18.76 26.13 112.78 148.71 68.02 61.52 78.10 65.23 69.48 97.73 50.15 84.94 27 E7_Aa NovelBoundary 0 14.08 0.00 11.86 5.56 31.49 0.00 15.99 14.17 8.10 16.31 7.42 0.00 0.00 14.95 36.47 20.17 12.06 6.67 0.00 9.65 2.97 0.00 0.00 28 ER7a ExonRegion 0 16.49 5.62 40.88 21.25 33.96 11.91 27.71 56.68 73.92 126.34 58.01 32.71 33.76 126.08 122.50 81.94 61.33 64.15 98.12 63.99 111.44 73.67 74.76 29 E7a_E8a KnownJunction 0 28.00 12.17 50.15 33.20 42.19 16.52 44.30 68.59 98.78 154.27 62.17 17.11 28.89 141.45 134.62 124.50 93.50 91.86 101.37 81.30 131.59 109.91 70.08 30 E8_Aa NovelBoundary 0 16.60 5.66 10.05 0.00 0.00 0.00 2.25 6.33 4.43 0.00 2.68 0.00 0.00 0.00 0.00 0.00 4.02 1.87 0.00 2.56 0.00 0.00 0.00 31 ER8a ExonRegion 0 37.70 11.79 43.38 23.35 34.68 23.18 52.15 68.46 88.79 129.97 74.47 53.17 47.56 146.77 136.88 107.00 86.55 76.09 102.73 71.87 102.69 67.82 93.12 32 E8a_E9a KnownJunction 0 47.34 15.39 37.46 28.23 23.26 11.81 53.79 60.50 81.57 123.19 36.32 55.67 26.62 135.85 145.37 65.88 65.17 55.75 125.93 70.50 86.06 52.48 80.41 33 ER9a ExonRegion 0 17.63 12.03 35.92 19.38 22.93 15.53 39.59 53.58 75.06 127.32 59.76 52.35 61.01 102.41 117.19 72.15 62.96 51.89 88.02 70.33 82.14 45.51 53.78 34 E9a_E10a KnownJunction 0 18.74 9.60 56.24 21.01 16.13 29.02 31.84 60.46 56.86 115.61 49.70 18.31 62.82 114.84 135.73 93.74 85.55 49.62 64.38 90.89 66.60 55.84 44.82 35 ER10a ExonRegion 0 16.53 4.67 48.55 16.57 28.69 28.33 44.94 58.18 56.47 106.78 59.18 51.54 41.71 162.50 127.93 90.93 88.63 58.44 83.29 54.59 95.13 57.74 69.35 36 E10a_E11a KnownJunction 0 0.00 10.06 35.57 7.13 42.19 50.82 26.19 64.49 54.11 129.85 68.12 48.77 26.30 99.77 78.99 95.19 74.24 65.29 124.52 42.44 86.49 45.07 78.36 37 E10a_E11b KnownJunction 0 0.00 0.00 1.33 0.00 0.00 0.00 1.77 0.00 1.68 4.92 7.58 0.00 6.82 7.24 5.44 3.42 4.02 0.00 3.86 0.00 0.00 5.27 0.00 38 I10_AR2 ActiveIntronRegion 1 6.16 0.85 1.74 1.31 1.99 0.00 3.59 6.88 6.02 7.78 8.12 7.48 13.13 5.61 19.68 8.05 11.70 9.24 11.58 9.71 5.53 1.86 4.81 39 ER11a ExonRegion 0 13.67 8.24 60.63 21.79 22.60 26.45 33.57 53.63 61.40 113.89 57.18 24.14 28.72 82.07 97.89 65.29 57.42 55.92 58.86 47.11 70.25 44.09 60.52 40 E11_Ab KnownBoundary 0 14.22 3.35 69.72 32.73 22.75 17.49 28.26 33.11 36.54 78.28 39.01 5.85 0.00 60.57 92.96 38.96 26.37 52.85 29.18 28.89 28.97 43.41 60.86 41 ER11b ExonRegion 0 15.64 9.46 65.27 22.88 17.15 16.22 28.98 46.65 44.89 89.10 30.94 10.46 6.29 57.53 75.77 43.44 25.77 40.13 25.88 38.94 35.54 37.00 36.64 42 E11_Da KnownBoundary 0 20.37 6.58 53.64 18.38 32.43 33.84 28.84 43.62 45.37 71.45 23.48 6.30 0.00 59.27 61.56 27.94 20.94 47.92 4.80 44.42 47.38 31.72 22.45 43 ER11c ExonRegion 0 10.68 5.49 40.67 16.88 14.12 8.72 20.78 32.19 40.57 59.86 21.80 7.38 3.33 33.38 54.52 28.59 23.85 17.73 20.75 29.07 28.04 24.01 26.27