Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SMURF2 Gene 0 86.50 133.25 95.32 92.51 109.81 113.60 123.74 129.03 134.68 150.32 75.68 76.80 103.41 69.76 84.34 56.81 56.52 51.40 46.56 95.23 179.11 116.54 71.59 2 262435 Transcript 0 109.05 174.74 130.25 123.08 145.35 157.36 169.36 169.90 187.17 202.37 110.17 103.91 150.67 107.11 120.17 84.11 89.25 74.65 64.90 136.85 269.93 156.87 105.24 3 IG26_AR1 ActiveIntergenicRegion 0 0.00 1.87 0.00 0.00 0.00 4.87 0.00 0.00 0.00 0.00 1.78 0.00 0.00 2.31 0.00 2.50 0.00 1.60 2.26 4.09 8.12 1.81 0.00 4 ER1a ExonRegion 0 2.40 9.01 5.77 2.20 3.56 5.47 8.66 4.42 6.43 9.74 8.28 1.07 3.75 7.30 4.08 9.60 7.87 11.83 8.22 15.84 46.32 6.53 16.60 5 E1a_E2a KnownJunction 0 13.26 45.72 46.57 20.31 48.73 13.29 39.88 24.56 48.76 39.97 16.64 6.30 13.31 27.14 23.98 44.77 60.78 8.87 8.28 31.38 102.92 26.39 45.84 6 E1a_E3a NovelJunction 0 3.48 11.51 11.74 9.56 0.00 19.31 6.36 10.27 22.80 14.34 4.47 0.00 0.00 3.00 4.45 4.36 3.65 11.28 9.41 11.76 19.95 6.00 8.37 7 E1a_E12a NovelJunction 0 3.19 14.08 46.36 53.77 3.65 4.88 14.84 30.97 39.00 33.47 2.26 0.00 0.00 2.30 0.00 3.67 0.00 31.38 8.09 16.04 0.00 0.00 11.01 8 I1 Intron 0 13.22 14.87 17.08 15.92 19.23 5.37 31.69 22.37 16.18 17.68 1.29 6.07 11.21 0.90 5.53 5.50 5.25 4.22 7.25 18.13 7.34 1.90 9.10 9 I1_SR1 SilentIntronRegion 0 2.80 2.50 4.41 4.51 2.34 4.42 5.39 6.77 6.09 7.12 2.54 0.00 3.04 0.59 4.58 5.94 5.14 7.69 12.28 10.75 16.41 0.00 14.62 10 I1_AR1 ActiveIntronRegion 0 4.74 6.35 9.41 9.88 5.26 5.40 15.29 12.80 13.25 12.45 1.91 2.09 6.64 2.50 6.79 9.04 6.80 12.31 11.47 27.45 20.86 0.52 18.69 11 I1_SR2 SilentIntronRegion 0 16.62 18.16 15.77 11.00 21.19 5.48 35.06 14.64 16.01 13.76 3.34 5.56 10.85 2.43 4.76 7.81 8.98 6.48 10.33 26.63 10.91 2.42 14.00 12 I1_AR2 ActiveIntronRegion 0 39.03 31.47 27.23 22.92 34.00 8.43 43.11 42.11 23.13 23.54 1.32 7.57 18.48 1.07 5.86 6.13 5.13 4.47 12.89 24.38 4.73 4.19 14.49 13 I1_SR3 SilentIntronRegion 0 17.00 18.98 24.37 21.84 25.54 7.02 41.56 27.72 19.58 19.67 2.11 10.23 16.78 1.06 6.86 7.50 5.40 4.06 7.37 20.03 5.65 3.50 13.46 14 I1_AR3 ActiveIntronRegion 0 8.85 12.82 22.54 20.45 26.23 10.70 35.93 16.06 20.11 12.35 2.30 7.57 18.71 1.97 6.91 7.01 11.28 4.94 10.86 27.46 13.08 0.35 11.62 15 I1_SR4 SilentIntronRegion 0 17.49 24.30 14.35 17.21 30.97 3.90 50.12 18.18 16.82 12.67 4.07 4.97 16.63 1.45 11.63 4.09 8.87 5.22 10.91 17.99 5.78 0.00 11.87 16 I1_AR4 ActiveIntronRegion 0 25.43 29.97 35.22 50.90 34.92 14.43 54.59 50.74 36.27 39.49 1.01 19.00 21.72 0.89 9.21 5.80 2.63 4.44 9.13 31.64 1.27 6.24 12.38 17 I1_SR5 SilentIntronRegion 0 15.00 19.20 22.53 17.74 22.20 7.06 29.41 24.07 15.31 17.80 1.50 7.38 12.94 0.94 5.61 5.94 3.11 2.98 6.41 16.47 2.95 1.53 9.13 18 I1_AR6 ActiveIntronRegion 0 20.06 19.23 39.09 27.72 34.57 9.44 51.65 24.43 24.18 25.36 1.59 2.49 8.97 1.88 5.39 5.48 4.51 1.60 13.41 18.72 1.97 2.80 14.89 19 I1_AR7 ActiveIntronRegion 0 25.66 26.69 44.27 30.15 52.18 16.96 63.05 47.96 31.65 34.26 1.93 8.66 14.07 0.00 15.59 4.83 6.19 6.47 25.08 21.28 0.55 0.00 30.47 20 I1_AR8 ActiveIntronRegion 0 25.40 17.54 45.65 36.46 52.85 21.78 60.57 49.69 25.78 33.69 1.93 8.66 14.07 0.00 14.87 5.94 7.01 8.78 20.31 17.82 3.03 0.00 27.90 21 I1_SR6 SilentIntronRegion 0 13.28 16.22 19.47 17.42 19.89 5.62 30.42 21.99 15.69 18.53 1.01 5.18 10.53 0.83 6.00 6.54 5.55 4.96 7.64 16.41 8.93 1.66 9.22 22 I1_AR9 ActiveIntronRegion 0 6.53 21.58 19.95 18.65 25.15 4.72 24.53 14.71 14.16 18.89 1.26 4.64 4.87 0.66 4.63 5.49 3.55 6.56 12.58 20.61 8.37 1.26 9.12 23 I1_SR7 SilentIntronRegion 0 11.22 13.03 13.65 14.98 16.36 4.10 30.23 25.23 16.47 19.48 1.07 5.19 9.77 0.49 5.75 4.91 6.58 4.31 5.37 18.84 7.47 1.42 7.90 24 I1_AR10 ActiveIntronRegion 0 7.46 5.52 5.04 6.23 7.57 1.22 31.62 21.12 13.60 11.65 1.13 7.83 8.66 0.63 4.93 4.53 4.23 1.76 3.07 15.25 8.93 0.81 4.99 25 I1_SR8 SilentIntronRegion 0 3.49 5.59 6.45 8.98 12.96 0.00 25.72 12.22 12.32 16.06 0.27 6.10 6.13 0.79 3.89 4.93 2.16 0.91 3.81 13.86 6.04 2.77 3.99 26 I1_AR13 ActiveIntronRegion 1 10.56 5.89 9.34 11.20 26.87 6.47 46.53 36.45 17.74 19.60 0.00 4.02 22.10 0.00 4.83 2.87 2.60 1.63 2.60 15.41 2.84 1.34 5.83 27 I1_SR10 SilentIntronRegion 0 9.58 8.85 6.07 9.29 11.31 3.44 31.85 20.20 14.92 15.31 1.34 9.47 11.76 1.08 4.39 3.00 4.20 3.10 3.67 20.06 6.67 1.38 7.08 28 ER2a ExonRegion 1 20.08 55.01 36.35 33.44 43.43 59.10 67.35 40.11 59.82 70.76 51.35 6.44 18.04 46.97 37.79 43.51 61.96 32.17 27.61 62.30 137.53 54.28 45.48 29 E2a_E3a KnownJunction 1 36.45 74.72 27.26 50.44 67.74 108.86 112.57 60.09 71.87 92.67 90.02 19.06 13.64 78.29 56.99 56.22 59.56 43.65 54.12 98.37 184.28 112.67 49.51 30 ER3a ExonRegion 0 17.17 46.32 55.11 65.37 52.58 62.30 71.86 101.38 136.34 135.20 99.06 38.33 80.94 82.59 63.32 57.07 85.34 51.57 57.51 120.63 213.90 112.59 65.12 31 E3a_E4a KnownJunction 0 12.74 75.78 68.74 55.80 26.06 52.87 83.73 109.83 180.09 180.00 132.35 67.82 127.75 87.00 110.02 66.14 87.42 49.83 34.35 142.85 283.56 123.45 60.95 32 ER4a ExonRegion 0 21.56 58.87 78.86 75.62 55.11 83.97 120.29 122.85 199.27 197.40 110.33 73.41 129.96 94.28 62.90 80.09 79.76 63.53 48.16 152.16 263.72 126.69 90.47 33 E4a_E5a KnownJunction 0 30.60 132.41 100.59 83.11 125.89 134.41 151.61 181.14 228.73 212.80 109.98 115.99 222.06 121.61 84.93 101.34 127.91 101.35 99.58 203.45 329.95 175.07 109.18 34 I4_SR1 SilentIntronRegion 0 3.76 12.60 16.25 12.09 14.07 1.83 33.10 10.65 15.06 8.88 2.56 16.06 18.31 1.83 10.11 2.40 3.30 4.05 12.12 16.68 4.55 8.00 8.81 35 I4_AR3 ActiveIntronRegion 0 9.72 7.86 12.98 24.10 17.88 7.17 29.85 23.96 17.57 8.34 1.05 8.86 18.55 0.22 0.00 1.89 3.30 1.93 3.19 14.41 0.00 3.50 1.74 36 I4_SR2 SilentIntronRegion 0 7.07 10.73 6.46 9.10 11.50 3.25 26.71 13.23 10.21 8.05 4.96 14.88 18.20 1.29 3.10 2.37 6.53 3.31 4.58 16.48 8.00 2.21 4.61 37 E5_Aa NovelBoundary 1 21.93 6.51 10.41 19.28 7.89 0.00 28.00 21.19 13.54 26.08 6.90 0.00 47.56 2.41 10.26 0.00 0.00 1.70 4.33 15.60 11.80 13.41 11.78 38 ER5a ExonRegion 0 34.54 90.12 106.77 84.89 88.14 103.67 121.74 148.02 200.41 202.79 118.38 134.34 219.86 145.01 122.07 119.38 130.29 81.64 77.51 182.01 364.38 188.59 122.18 39 E5a_E6a KnownJunction 0 33.64 67.09 125.10 95.09 64.35 143.16 119.02 180.36 210.04 233.67 145.83 97.83 236.19 134.26 117.31 124.07 130.72 80.46 82.45 173.02 399.95 192.82 134.36 40 ER6a ExonRegion 0 36.55 83.40 91.96 73.68 57.17 123.25 112.51 125.14 172.38 189.05 112.43 116.03 211.82 133.20 73.38 87.31 113.78 70.89 72.55 134.62 367.06 122.02 135.47 41 E6a_E7a KnownJunction 1 34.30 78.41 76.85 65.06 59.34 50.14 93.09 67.28 115.16 121.66 51.80 113.14 163.14 122.14 75.28 96.47 60.78 41.41 49.79 83.60 209.73 66.19 108.84 42 ER7a ExonRegion 1 66.65 127.80 98.15 100.64 97.09 91.06 158.72 117.64 157.84 175.33 82.24 114.94 210.83 128.19 100.06 118.32 94.35 84.27 84.15 150.91 352.86 144.46 126.52 43 E7a_E8a KnownJunction 0 57.49 177.60 135.51 94.89 96.10 105.90 200.85 131.40 202.02 199.53 123.56 136.39 262.16 133.97 102.60 92.03 92.47 109.64 75.96 162.73 474.14 180.46 152.20 44 ER8a ExonRegion 0 58.81 137.74 114.56 115.36 125.19 149.37 163.90 135.59 178.79 201.22 103.80 109.52 212.00 144.73 92.95 105.34 87.51 123.12 78.27 154.09 386.85 149.83 143.58 45 E8_Da NovelBoundary 0 0.00 17.69 23.59 26.64 36.76 32.20 67.79 40.62 24.88 31.35 12.58 5.70 33.11 4.94 11.50 15.12 3.65 6.84 19.77 18.02 35.09 8.08 14.43 46 E8a_E9a KnownJunction 1 53.19 179.18 98.90 95.69 151.19 140.88 146.09 151.19 171.53 199.64 92.50 66.77 207.94 158.40 102.60 107.66 70.22 114.74 72.19 143.24 433.92 140.04 136.75 47 I8 Intron 0 23.20 32.40 22.22 23.42 29.32 17.44 45.08 33.86 27.47 31.66 7.99 19.35 25.20 7.82 10.12 8.19 8.43 3.87 12.96 16.38 12.52 17.02 7.31 48 I8_SR1 SilentIntronRegion 0 5.69 18.79 14.19 14.41 24.94 22.16 51.84 23.64 23.44 20.52 12.77 18.86 15.24 13.17 14.44 6.02 11.95 5.76 9.71 14.99 24.19 14.78 6.05 49 I8_AR1 ActiveIntronRegion 0 17.44 30.61 23.58 24.38 31.60 18.04 48.48 35.26 28.72 34.20 8.19 21.56 27.91 7.56 9.94 7.85 9.05 3.88 14.02 16.64 12.61 18.10 8.00 50 I8_SR2 SilentIntronRegion 0 65.71 49.27 17.50 21.53 17.56 12.02 22.06 29.91 21.83 21.14 4.88 6.30 13.09 7.24 9.52 11.26 3.33 3.02 8.04 15.58 7.21 11.57 3.71 51 E9_Aa NovelBoundary 0 137.36 490.24 33.94 39.99 23.17 21.69 73.27 46.62 63.11 47.89 2.68 19.36 26.78 11.48 14.71 8.03 8.98 15.34 24.19 28.89 28.79 18.68 7.60 52 ER9a ExonRegion 0 87.77 296.21 97.29 94.82 110.37 89.01 139.61 145.23 170.97 207.17 117.63 73.35 149.58 124.16 98.37 89.62 106.44 118.69 76.30 144.13 332.89 145.28 117.81 53 E9_Da NovelBoundary 0 28.52 134.98 29.48 32.83 39.56 8.69 46.02 18.52 25.61 31.13 0.00 6.60 19.97 2.47 10.75 8.37 8.79 0.00 3.67 0.00 20.20 9.37 3.33 54 E9a_E10a KnownJunction 0 60.08 109.26 82.05 83.91 112.39 84.50 118.84 122.40 143.00 179.73 144.77 74.27 69.96 118.02 123.00 57.08 93.50 114.45 91.58 134.93 319.08 133.12 108.33 55 I9 Intron 0 19.42 29.24 14.30 16.71 14.46 5.49 24.94 14.04 11.24 17.17 1.27 5.66 10.73 1.02 7.14 4.26 4.53 4.57 7.54 9.55 14.29 6.46 6.99 56 I9_SR1 SilentIntronRegion 0 46.79 70.41 25.42 22.92 18.94 5.79 23.47 19.28 12.49 19.89 2.03 1.04 7.21 0.96 9.06 7.30 6.18 8.16 15.28 10.33 23.06 5.97 8.42 57 I9_SR2 SilentIntronRegion 0 9.46 15.13 9.83 14.64 12.71 5.45 26.37 12.84 10.73 17.16 1.00 7.55 12.56 1.12 6.70 3.06 4.02 3.36 5.07 9.11 10.78 7.12 6.46 58 ER10a ExonRegion 0 82.80 150.01 100.51 101.07 115.55 143.65 168.09 146.24 179.53 211.99 131.22 114.91 135.51 128.31 109.79 79.63 108.51 114.17 68.68 138.10 371.76 145.56 121.70 59 E10a_E11a KnownJunction 0 87.72 162.01 108.01 65.66 162.48 169.90 140.04 103.63 120.46 173.64 115.03 85.68 136.19 158.81 131.90 72.37 90.32 73.29 77.46 90.38 301.54 125.28 145.89 60 I10 Intron 0 9.22 15.64 11.80 20.25 17.86 13.79 31.81 23.91 23.89 17.78 2.33 4.97 9.98 4.42 6.45 4.05 3.93 4.32 6.43 15.58 9.56 7.04 4.80 61 I10_SR1 SilentIntronRegion 0 6.77 8.47 8.83 16.92 10.55 9.48 26.45 14.28 13.15 8.77 1.65 3.46 5.94 2.47 5.38 2.21 3.44 2.84 5.33 8.87 5.49 2.25 4.26 62 I10_AR1 ActiveIntronRegion 0 9.91 16.03 21.82 27.77 22.41 15.14 26.26 27.61 26.53 24.85 2.62 9.66 8.70 7.08 4.79 3.30 2.85 2.72 8.24 18.36 5.16 11.55 3.62 63 I10_SR3 SilentIntronRegion 0 10.96 21.12 11.77 21.09 22.47 16.83 37.28 30.53 31.61 23.11 2.78 5.04 13.41 5.30 7.67 5.64 4.56 5.84 6.87 20.14 13.75 9.71 5.49 64 E11_Aa NovelBoundary 0 24.82 43.74 18.01 34.53 27.16 49.35 82.41 37.75 35.33 24.10 0.00 7.65 0.00 7.06 9.64 4.36 0.00 19.52 17.13 30.62 20.94 8.76 8.45 65 ER11a ExonRegion 0 105.02 150.83 110.00 110.30 137.20 158.08 146.99 134.49 167.12 194.56 96.30 111.42 111.36 109.88 97.95 77.08 97.78 68.80 67.61 123.75 340.32 132.38 123.80 66 E11a_E12a KnownJunction 0 147.66 152.08 130.54 176.53 122.67 145.94 231.50 183.07 230.90 232.71 68.28 77.28 93.99 141.09 137.96 85.36 167.55 79.13 76.24 148.54 233.83 195.70 166.80 67 E12_Aa NovelBoundary 0 35.56 44.07 3.46 8.49 56.37 53.15 97.47 10.15 1.79 4.57 18.48 5.85 14.61 25.25 29.30 16.75 62.27 3.23 15.81 66.41 67.58 54.93 36.62 68 ER12a ExonRegion 0 105.72 138.52 122.60 148.63 179.12 220.78 216.21 194.95 214.26 215.87 105.03 126.05 104.58 121.62 132.29 76.25 94.77 70.45 57.12 119.29 294.64 139.90 126.61 69 E12_Da NovelBoundary 0 14.60 16.05 11.92 16.15 18.68 2.67 17.14 30.27 14.21 12.52 2.42 0.00 12.99 0.00 10.63 7.01 3.65 12.48 18.26 3.26 22.86 0.00 24.41 70 E12a_E13a KnownJunction 0 139.73 194.57 125.75 141.37 225.21 273.82 267.36 147.13 180.06 199.32 109.45 93.93 126.29 118.37 123.12 67.76 83.22 62.06 47.91 141.13 229.38 131.65 99.96 71 ER13a ExonRegion 0 102.49 182.19 125.18 141.02 193.98 237.68 212.09 218.04 212.39 212.82 121.74 143.06 127.73 94.24 116.68 55.00 72.99 56.46 51.24 149.49 144.54 170.40 102.88 72 E13a_E14a KnownJunction 0 185.44 217.26 137.16 165.45 214.77 303.23 276.41 258.48 250.26 233.35 152.93 168.81 135.06 112.31 188.15 50.16 85.55 33.00 35.20 157.62 177.30 170.60 75.63 73 ER14a ExonRegion 0 136.17 196.78 165.75 160.70 148.33 186.33 205.40 228.03 258.17 243.23 123.14 148.29 161.27 88.36 135.48 58.94 72.27 35.47 45.66 153.29 106.15 159.24 61.01 74 E14a_E15a KnownJunction 0 175.96 366.97 178.56 206.57 211.46 235.94 244.31 235.56 250.52 283.69 137.77 156.20 138.30 73.17 159.22 80.75 59.37 21.35 30.40 131.22 84.26 205.44 62.14 75 ER15a ExonRegion 0 196.53 321.35 207.92 212.13 272.01 240.43 239.12 240.22 243.19 265.74 122.39 186.70 185.83 82.14 141.85 66.31 90.39 43.23 44.78 153.81 124.33 196.83 71.95 76 E15a_E16a KnownJunction 0 265.23 347.44 292.45 281.32 325.21 300.28 326.41 303.91 259.52 304.00 147.98 270.69 294.46 108.25 209.90 72.37 106.40 52.15 35.11 167.27 139.86 261.83 94.58 77 ER16a ExonRegion 0 225.73 258.79 244.88 224.48 255.70 225.54 250.55 267.11 245.07 271.62 136.98 157.76 217.99 93.08 166.35 78.77 90.92 79.00 59.81 164.09 217.29 222.30 103.36 78 E16a_E17a KnownJunction 0 414.30 280.81 274.38 227.04 279.12 200.11 202.62 334.18 275.46 294.49 177.89 110.89 238.78 115.84 206.32 94.08 170.45 84.11 74.26 170.21 291.65 177.03 90.06 79 I16_AR1 ActiveIntronRegion 0 8.30 8.67 5.26 9.32 22.39 2.99 25.43 19.15 19.37 14.34 1.39 4.02 3.32 0.73 7.26 2.29 2.90 2.78 3.08 7.20 6.44 5.14 2.58 80 ER17a ExonRegion 0 293.51 353.04 213.35 187.26 242.47 207.95 212.24 289.90 258.48 302.94 157.52 154.04 196.19 108.38 187.94 114.54 93.62 130.87 91.71 171.68 394.97 214.43 125.71 81 E17a_E18a KnownJunction 0 177.29 401.24 244.14 212.06 313.16 403.06 368.85 263.08 273.43 279.96 132.40 59.87 169.96 155.45 205.58 108.60 65.92 155.74 120.29 166.18 442.88 217.26 109.44 82 E18_Aa NovelBoundary 0 9.41 27.82 30.19 26.84 29.29 2.90 26.90 24.85 21.59 17.33 2.68 0.00 6.82 0.00 15.20 0.00 4.02 12.15 0.00 21.28 11.24 3.12 8.62 83 ER18a ExonRegion 0 219.51 363.80 240.04 198.30 266.38 264.79 249.74 331.89 292.17 311.43 136.57 111.03 181.49 123.56 216.49 156.27 88.91 159.93 148.75 182.00 430.74 252.49 167.27 84 E18a_E19a KnownJunction 1 232.19 292.32 292.18 244.59 250.51 233.39 197.19 353.15 293.11 322.67 159.99 169.56 220.44 115.66 271.09 234.72 95.47 126.85 144.76 205.43 407.67 402.49 246.53 85 I18 Intron 0 15.76 16.79 11.53 4.93 19.06 6.23 29.15 24.60 13.11 17.99 5.63 10.43 17.78 6.22 7.82 3.37 5.88 1.64 2.06 10.68 6.07 7.42 6.66 86 I18_AR1 ActiveIntronRegion 1 26.31 12.20 9.80 7.79 22.93 0.00 19.10 21.98 20.29 32.28 11.60 4.33 20.10 12.76 6.63 0.00 13.20 3.17 0.00 16.11 11.33 6.25 10.07 87 I18_SR2 SilentIntronRegion 0 16.32 16.97 11.15 4.93 20.71 5.40 33.35 25.04 14.16 18.11 4.42 10.74 21.20 4.34 7.31 4.37 3.46 1.12 2.34 12.92 5.92 8.38 5.70 88 E19_Aa NovelBoundary 0 29.04 19.54 35.48 15.82 19.44 2.27 41.73 49.33 22.05 28.96 8.00 6.30 13.15 2.47 18.91 24.69 4.77 0.00 12.89 18.73 5.75 20.39 12.55 89 ER19a ExonRegion 0 64.70 90.57 59.61 59.26 78.20 70.24 80.83 84.60 67.72 85.31 32.79 33.58 46.55 27.26 56.60 27.23 17.20 14.00 25.87 39.62 51.28 82.86 29.32