Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DDX5 Gene 0 3540.58 2878.57 2648.01 1868.64 4585.62 3319.91 3825.40 3645.15 4926.92 3329.56 3217.57 2923.66 1613.55 3318.53 2862.06 2726.70 2752.01 1369.05 1599.02 2605.23 1643.52 3521.19 2302.13 2 450599 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 225792 Transcript 1 1874.73 2170.82 1278.64 1033.57 2052.38 1754.31 2020.68 2336.51 3846.10 2491.56 3035.99 2698.12 1401.07 3300.46 1495.15 2624.90 2756.14 1536.21 1597.60 2222.90 2056.34 3028.16 2109.25 4 IG24 Intergenic 0 10.70 12.19 7.78 4.99 8.70 23.84 16.93 13.21 23.54 17.90 16.06 1.29 2.01 8.91 6.28 19.54 18.36 18.85 17.26 20.13 9.70 9.18 16.12 5 IG24_AR1 ActiveIntergenicRegion 0 10.73 12.23 7.80 5.00 8.72 23.91 16.97 13.25 23.60 17.95 16.10 1.29 2.02 8.93 6.29 19.59 18.41 18.90 17.31 20.19 9.73 9.21 16.17 6 ER1a ExonRegion 1 1396.28 1382.10 503.03 313.83 2215.88 3518.29 2311.46 1006.95 1886.75 1273.78 1846.66 228.75 218.57 1843.08 894.48 1757.19 1978.69 1382.76 810.01 1711.19 1867.12 1193.53 1871.60 7 E1a_E2a KnownJunction 1 616.11 1906.11 1022.76 785.38 590.58 430.15 498.77 2079.46 3352.19 2259.57 1707.33 347.06 182.13 5916.92 2394.96 2889.16 1729.50 2411.59 1571.53 3014.78 1576.87 3513.95 2865.81 8 ER2a ExonRegion 0 902.81 2537.38 1466.62 1097.67 4615.66 6057.26 4268.15 2702.67 4003.42 2734.68 2427.86 1312.82 986.40 3097.61 1603.85 3838.32 2163.60 2311.40 1861.50 2282.60 1606.98 3035.93 3566.39 9 E2a_E3a KnownJunction 1 2128.08 3104.78 1736.96 1329.80 1859.08 1392.04 1731.35 3149.97 4712.94 3285.51 2597.08 1803.59 754.01 3295.27 1289.95 2114.83 2398.31 1550.94 1082.57 2157.78 1554.81 2106.31 1710.08 10 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 1 3030.75 3048.63 1645.91 1255.15 1826.52 1371.94 1565.87 2943.47 4523.46 3154.48 3103.41 1931.15 990.94 3340.66 1372.71 2772.57 2711.92 1645.03 1386.69 2386.62 1695.60 3066.25 2236.46 12 ER3b ExonRegion 0 3204.46 3028.08 1728.11 1373.21 2145.10 1838.53 1997.02 3102.39 4861.98 3279.66 3923.73 3165.92 1892.18 3965.99 1726.40 3398.86 3428.76 1683.08 1961.43 2723.11 2318.68 4204.40 2682.16 13 E3b_E4a KnownJunction 1 2822.13 3087.94 1675.75 1396.89 2754.08 2434.28 2629.36 3138.02 5070.61 3251.18 3706.99 3787.53 2222.58 4012.03 1726.32 2991.61 3230.85 1712.11 1980.48 2750.80 2349.02 3878.47 2399.47 14 ER4a ExonRegion 0 1544.57 2343.94 1416.35 1140.89 2337.54 1977.36 2312.94 2696.72 4490.40 2917.28 3653.94 3383.61 1612.85 3826.13 1778.55 2919.16 3321.61 1981.96 1751.02 2687.37 2621.41 3134.33 2424.70 15 E4a_E5a KnownJunction 0 1641.62 2327.02 1512.96 1225.52 2934.21 2486.52 3101.86 2702.22 4751.95 2971.85 3870.14 3114.56 1249.59 4672.16 2160.34 3794.05 3786.25 2298.38 2263.22 2927.66 2990.40 3871.49 3022.28 16 ER5a ExonRegion 1 1097.73 1634.04 1466.81 1202.06 2103.83 2464.32 2321.06 2501.52 4405.75 2795.70 2976.31 3513.10 1460.38 4553.05 1890.30 2884.76 3046.33 1744.53 1554.80 2791.22 2395.30 2719.81 2434.25 17 E5a_E6a KnownJunction 0 1179.10 1506.24 1646.16 1375.12 1485.31 2301.91 1746.37 2604.05 4564.83 2821.69 2208.77 3450.07 1418.74 4328.53 2360.10 2523.44 2375.69 1387.57 1179.33 2850.32 1756.02 2547.56 2048.63 18 ER6a ExonRegion 0 1358.03 1382.00 1618.20 1297.69 2148.72 2487.38 2652.99 2487.54 4440.11 2832.73 3017.15 2444.29 1237.34 4128.92 1972.81 2815.25 3071.41 1786.28 1494.94 2697.62 2282.83 2646.72 2450.34 19 E6a_E7a KnownJunction 0 2191.57 1769.29 1735.83 1400.19 2938.88 2821.44 3763.90 2630.96 4586.32 2959.78 3482.99 2320.81 1185.47 4115.04 2321.16 3068.68 2924.73 1905.86 1972.67 2715.71 1997.14 2946.98 2762.26 20 ER7a ExonRegion 0 1986.28 1812.02 1916.34 1516.65 4077.81 3420.22 4007.05 2999.67 5076.58 3236.88 3863.79 2667.33 1541.91 4009.56 2303.07 3186.03 3320.56 1610.34 1811.56 2887.57 1735.37 3419.06 2650.58 21 E7a_E8a KnownJunction 0 3369.04 2613.68 2125.56 1792.75 4536.59 3345.06 4207.60 3395.34 5202.52 3426.91 3817.07 2907.95 1719.37 3901.37 2772.98 2777.05 3338.19 1189.84 1995.16 2819.96 1354.28 3599.79 2199.89 22 ER8a ExonRegion 0 2763.06 2849.82 2212.86 1829.57 4412.21 3111.49 4039.08 3408.34 5168.32 3333.80 3774.16 3468.78 2135.75 3550.57 2461.74 2624.56 3151.27 1133.49 1617.93 3004.21 1328.65 3534.37 2165.53 23 E8a_E9a KnownJunction 0 4165.78 3741.44 2775.09 2305.80 6200.17 4192.02 6482.16 3848.27 5526.56 3737.60 3630.02 4843.58 2867.18 4701.59 3345.70 3161.73 3544.83 1125.71 2229.99 3554.37 1280.15 4649.52 2571.56 24 ER9a ExonRegion 0 3282.36 3180.63 2747.62 2187.77 6212.87 3889.57 5508.39 3513.42 5057.86 3491.31 3648.20 5152.61 3003.14 4303.20 2861.50 2955.71 3295.84 1249.76 1966.12 3035.93 1542.89 4251.39 2513.92 25 E9a_E10a KnownJunction 0 2823.46 2801.41 2493.88 2127.57 4018.51 2671.98 4275.92 2968.63 4352.68 2993.42 2133.75 3081.40 2106.84 3159.47 2624.15 2670.75 2424.40 1313.86 1785.09 1966.60 1523.18 3639.54 2008.59 26 ER10a ExonRegion 0 2654.45 2887.39 2517.13 1938.77 4443.85 2913.17 4037.95 2949.91 4290.27 3051.84 2799.62 4176.89 2262.41 3806.75 2611.17 2947.15 2805.28 1295.96 1657.42 2529.64 1796.31 3753.56 2330.46 27 E10a_E11a KnownJunction 0 3994.49 3578.84 3116.57 2325.08 6308.83 3924.05 5779.71 3761.23 4856.08 3477.36 3677.40 4547.08 2135.09 4207.33 2814.27 3075.69 3327.81 1226.07 1911.40 2787.75 1770.85 4423.32 2490.21 28 ER11a ExonRegion 0 2802.02 2976.58 2438.90 1743.95 4368.83 3210.43 4282.13 2695.44 3150.57 2753.66 3660.11 4988.48 1892.12 3916.81 2673.41 2723.26 3310.30 1107.76 1669.98 2348.04 1875.14 3834.79 2326.65 29 E11_Da NovelBoundary 1 1495.30 1196.63 867.41 873.62 2098.56 1524.12 1933.00 1842.99 3595.22 1559.36 990.20 1590.82 618.47 2058.99 707.09 1506.53 643.38 695.34 850.10 1120.21 571.87 950.83 1021.11 30 E11a_E12a KnownJunction 1 2314.04 2947.83 1925.24 1269.24 2864.77 1820.94 2678.07 1848.21 1710.37 2040.68 2443.99 4129.95 1292.45 2577.92 2252.68 1902.15 2543.34 868.20 1453.69 1655.71 1306.22 3081.45 1971.89 31 E11a_E13a NovelJunction 0 13.41 56.57 10.97 10.49 11.80 22.15 58.78 11.87 34.90 15.07 14.64 73.07 13.96 50.15 45.37 15.30 18.51 54.88 9.13 58.61 19.65 19.17 4.18 32 I11 Intron 0 2162.93 1137.41 987.67 857.95 2338.70 1813.98 2038.51 1825.24 3190.13 1384.34 1088.98 941.06 658.79 1749.74 1055.37 1318.11 752.00 558.19 745.18 1188.95 639.66 960.91 923.03 33 I11_AR1 ActiveIntronRegion 1 2166.62 1139.34 989.35 859.41 2342.70 1817.09 2041.99 1828.35 3195.60 1386.72 1090.85 942.63 659.90 1752.70 1057.16 1320.37 753.29 559.15 746.46 1190.98 640.76 962.55 924.60 34 E12_Aa NovelBoundary 0 9464.12 2301.37 1589.86 1581.18 3260.19 1960.69 3099.78 2565.85 4340.49 2048.63 1154.77 1074.95 1069.25 1445.53 1552.76 881.56 697.24 376.40 722.47 1361.76 360.78 1035.40 859.27 35 ER12a ExonRegion 0 6917.40 4903.42 3430.04 2294.72 6627.79 3892.75 5103.05 4233.54 5037.00 3510.52 3520.39 4003.70 2320.09 3924.90 3866.34 3064.67 3157.46 1427.88 1875.73 2847.14 1793.67 3662.28 2556.69 36 E12_Da NovelBoundary 0 1791.80 1221.62 1299.45 863.93 1698.73 883.87 1239.16 1561.59 1981.69 906.32 727.18 602.90 632.59 749.90 733.17 556.01 575.41 309.82 408.20 1170.39 434.60 978.27 646.80 37 E12a_E13a KnownJunction 1 6351.87 4002.38 3054.09 2102.06 4880.56 3550.34 3861.63 3812.45 3935.67 3315.11 2008.98 3592.32 1565.16 3309.04 3628.66 2762.44 2291.16 1234.32 1585.46 1935.41 1760.84 2872.10 2048.63 38 I12 Intron 0 2026.59 987.62 1043.78 694.72 1667.74 995.08 1401.85 1249.84 1592.39 638.43 687.38 675.61 567.92 704.38 678.16 550.33 435.27 329.53 480.77 862.23 285.43 883.11 588.97 39 I12_AR1 ActiveIntronRegion 0 2044.51 996.21 1053.11 700.94 1682.58 1003.96 1414.36 1260.99 1606.51 644.13 693.47 681.58 573.02 710.64 684.17 555.26 439.17 332.48 485.03 869.97 287.98 891.02 594.19 40 E13_Aa NovelBoundary 1 3472.47 1911.24 1592.94 907.71 2349.66 1622.99 2330.73 1800.97 2159.15 877.82 603.36 1117.86 1072.98 750.08 930.10 691.53 411.13 461.87 542.04 949.68 451.16 937.97 699.98 41 ER13a ExonRegion 0 5568.81 3464.08 4302.34 2821.68 6083.60 3141.07 4291.33 5455.92 6382.99 4349.11 3282.05 3025.80 1628.87 2719.34 4348.02 2376.71 2361.67 897.89 1531.85 2619.56 1117.54 4425.76 1868.01 42 ER13b ExonRegion 0 160.86 67.11 60.04 31.35 90.98 34.84 62.23 43.21 55.58 37.85 25.13 38.97 28.14 25.99 84.14 20.80 13.20 5.54 31.85 25.53 2.20 52.09 17.62 43 IG23 Intergenic 0 202.47 428.34 189.85 319.62 641.51 352.44 374.22 469.47 492.59 441.36 15.22 69.82 15.57 25.95 26.67 16.02 17.86 37.00 105.88 186.29 21.55 113.52 67.98 44 IG23_AR7 ActiveIntergenicRegion 0 375.25 796.22 350.76 594.09 1191.38 655.14 692.49 870.06 910.30 817.58 27.72 129.60 28.37 47.75 49.44 28.72 32.83 66.39 194.08 343.58 39.32 206.80 120.90 45 IG23_SR4 SilentIntergenicRegion 0 2.99 1.61 2.14 1.67 5.27 2.42 5.11 6.75 14.02 6.54 2.12 0.00 3.13 1.57 0.18 0.90 1.57 3.67 3.69 6.45 0.03 7.51 9.74 46 IG23_AR6 ActiveIntergenicRegion 0 2.12 0.00 1.23 1.36 8.03 3.97 4.19 6.91 12.35 4.78 3.87 0.00 0.00 0.00 0.00 0.00 3.30 1.85 0.00 6.38 0.00 11.11 8.81 47 IG23_AR5 ActiveIntergenicRegion 0 3.11 1.41 1.53 0.83 3.32 0.97 3.74 3.46 12.35 6.07 0.36 0.82 0.89 0.00 0.00 1.37 0.22 1.70 3.42 2.92 0.32 7.36 6.19 48 IG23_AR2 ActiveIntergenicRegion 0 0.00 0.00 6.13 1.36 0.00 1.63 4.12 2.88 5.90 3.06 1.93 0.00 0.00 1.62 0.00 0.00 0.00 3.70 3.19 10.64 0.49 7.87 8.16