Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HEATR6 Gene 0 42.32 108.02 81.47 72.17 81.01 103.41 87.70 88.22 119.40 163.36 69.52 29.98 56.72 51.94 40.14 36.15 52.20 86.17 68.62 97.79 53.88 48.57 51.86 2 184956 Transcript 0 28.28 83.32 59.83 51.13 48.70 79.43 62.64 66.39 107.87 150.49 59.89 23.32 42.52 52.84 33.03 31.79 46.73 83.80 57.46 90.98 54.99 38.44 44.94 3 393017 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG21_AR17 ActiveIntergenicRegion 0 10.73 12.06 19.47 19.28 31.06 24.23 14.00 19.82 18.84 26.09 4.42 3.56 7.54 2.61 6.53 6.16 0.00 14.85 27.19 34.12 5.27 0.00 2.10 5 IG21_SR15 SilentIntergenicRegion 0 3.74 14.24 21.70 42.04 30.40 28.27 19.48 17.40 29.74 22.88 8.02 0.98 1.26 5.33 7.04 6.91 6.06 15.35 15.00 23.70 5.64 0.52 2.61 6 IG21_AR16 ActiveIntergenicRegion 0 6.06 20.83 26.74 39.22 55.81 35.25 34.04 26.71 28.63 28.90 7.04 4.17 2.44 4.86 7.70 8.51 6.01 17.78 17.74 32.23 3.44 0.54 1.51 7 IG21_SR14 SilentIntergenicRegion 0 9.10 10.18 7.51 10.18 22.98 20.67 20.37 16.11 12.20 8.87 4.14 6.29 4.05 2.65 5.96 3.19 6.50 2.64 2.85 10.27 1.19 1.12 0.00 8 IG21_AR8 ActiveIntergenicRegion 0 16.93 1.02 0.00 1.70 7.69 7.34 4.63 5.19 6.33 5.16 0.00 0.00 0.00 0.00 7.62 0.00 0.00 0.00 3.19 6.65 0.00 0.00 2.94 9 IG21_AR6 ActiveIntergenicRegion 0 20.33 1.09 9.15 14.00 11.10 7.31 6.93 9.67 5.43 8.29 0.79 0.96 0.52 0.51 34.49 0.00 2.87 4.32 4.29 3.78 1.63 3.93 1.56 10 IG21_AR5 ActiveIntergenicRegion 0 16.70 1.34 3.29 7.22 11.32 2.28 9.96 4.19 5.28 7.32 0.21 0.00 2.76 0.60 8.95 0.16 1.98 1.21 2.39 2.88 1.56 1.26 1.82 11 IG21_SR6 SilentIntergenicRegion 0 17.68 1.58 2.78 6.02 14.11 3.77 8.86 1.96 4.09 5.22 0.41 0.00 1.07 0.26 9.20 0.00 1.41 1.89 1.10 2.16 0.47 0.58 2.23 12 IG21_SR5 SilentIntergenicRegion 0 12.94 2.03 1.12 6.74 6.35 1.69 5.35 2.91 3.59 4.37 0.26 0.00 0.53 0.52 4.14 0.00 0.80 1.76 1.72 3.65 1.72 1.98 1.75 13 IG21_AR3 ActiveIntergenicRegion 0 15.22 4.65 3.58 6.70 12.02 2.65 8.04 5.47 3.68 5.74 0.00 0.00 0.00 0.76 15.69 0.00 2.05 2.70 4.64 4.96 1.10 1.84 1.29 14 IG21_AR2 ActiveIntergenicRegion 0 16.94 3.28 4.62 8.94 20.81 5.42 8.28 5.91 5.66 6.42 0.83 0.13 0.00 0.64 17.54 0.00 1.39 2.49 3.79 6.28 0.50 2.31 2.53 15 ER1a ExonRegion 1 13.53 23.05 13.26 8.49 13.66 40.29 28.95 23.86 35.85 57.15 33.98 1.54 2.68 27.05 18.92 12.03 21.65 30.07 36.96 74.28 36.12 12.76 21.80 16 E1a_E2a KnownJunction 0 3.78 18.94 13.13 24.87 7.56 12.38 3.71 51.18 66.96 84.80 24.43 0.00 0.00 82.52 62.43 28.03 13.56 84.98 70.03 93.45 26.93 37.66 65.64 17 ER2a ExonRegion 0 8.41 41.93 18.61 22.82 37.04 67.99 50.68 36.73 51.86 63.76 29.35 12.31 36.09 29.85 28.88 23.23 35.61 85.53 35.45 80.50 20.85 21.34 37.71 18 E2a_E3a KnownJunction 1 0.00 57.75 22.80 7.42 40.49 87.68 76.09 28.83 53.36 66.48 53.70 6.60 19.97 12.54 5.07 7.60 47.12 11.32 25.51 57.78 29.59 13.47 11.69 19 I2 Intron 0 11.06 14.44 5.65 10.08 15.73 14.46 20.18 20.54 20.52 19.13 4.97 3.76 10.32 4.82 3.66 4.14 5.18 4.41 6.80 12.05 3.65 8.44 4.47 20 I2_SR1 SilentIntronRegion 0 15.34 11.57 5.73 11.95 6.30 7.19 19.16 29.84 12.63 15.41 2.65 5.59 12.61 3.20 5.32 2.33 3.24 2.67 3.12 7.09 1.30 8.58 5.75 21 I2_AR1 ActiveIntronRegion 0 26.35 15.12 6.39 5.38 14.44 18.88 29.69 28.94 26.71 18.81 1.56 0.00 13.65 7.56 8.41 9.68 8.63 5.97 29.89 14.16 2.46 15.55 1.92 22 I2_SR2 SilentIntronRegion 0 9.89 7.74 8.86 7.90 14.44 11.61 25.74 20.65 20.49 26.76 4.41 2.78 13.09 3.08 1.76 0.79 3.44 2.18 3.85 10.42 4.18 5.20 3.06 23 I2_AR2 ActiveIntronRegion 0 7.88 17.78 4.58 10.69 20.36 17.97 17.90 15.85 23.25 18.54 6.57 3.81 8.21 5.75 2.98 5.29 6.15 5.65 6.44 14.47 4.64 8.60 4.75 24 E3_Aa NovelBoundary 0 14.37 39.93 7.75 23.61 41.34 24.76 30.34 31.71 42.24 35.43 7.21 0.00 13.80 14.60 0.00 3.42 12.44 13.22 14.40 17.90 2.66 8.88 8.71 25 ER3a ExonRegion 0 17.73 77.95 34.90 37.93 38.96 66.74 56.81 54.46 78.87 107.68 57.33 32.21 58.02 36.20 13.23 27.65 48.99 52.46 33.83 81.71 38.38 28.46 26.70 26 E3b_E4a KnownJunction 1 30.52 117.15 56.38 48.65 38.71 45.49 55.38 45.47 106.77 129.66 45.06 43.51 79.70 70.93 15.95 31.44 59.56 37.31 44.52 72.29 56.59 30.80 47.38 27 ER3b ExonRegion 1 15.34 106.00 48.71 47.36 37.46 50.20 48.82 56.17 101.90 116.70 47.11 41.67 72.70 55.63 16.32 27.12 42.50 41.11 30.66 69.68 52.89 35.94 43.68 28 ER3c ExonRegion 1 16.93 117.95 47.79 42.25 32.11 56.85 42.37 51.85 101.28 116.98 46.39 38.97 79.73 56.84 17.41 29.72 46.21 40.65 31.85 72.34 52.89 35.42 41.11 29 E4_Aa NovelBoundary 1 0.00 8.42 1.33 1.73 7.30 0.00 13.16 5.09 13.92 3.06 0.00 25.36 15.58 0.00 4.45 4.36 0.00 2.57 4.33 2.49 0.00 3.12 3.93 30 ER4a ExonRegion 1 21.11 109.92 36.93 46.03 63.57 77.43 64.25 58.77 88.77 123.31 63.00 25.75 62.55 42.07 13.66 20.98 46.58 48.65 42.32 92.42 46.73 35.78 39.47 31 E4a_E5a KnownJunction 0 11.34 83.08 58.48 41.85 66.21 61.90 51.67 64.90 95.54 111.32 48.54 12.30 40.42 35.67 8.90 12.05 26.74 37.60 35.95 113.33 30.09 35.21 7.51 32 ER5a ExonRegion 0 17.19 88.10 34.08 53.66 67.55 76.14 80.58 75.57 111.21 175.55 83.60 21.31 58.28 44.02 19.55 23.08 49.69 59.11 57.06 105.68 29.51 51.29 38.58 33 E5a_E6a KnownJunction 0 12.97 147.01 49.64 67.49 68.25 98.58 101.71 94.72 118.03 158.83 109.92 36.46 60.87 70.34 27.94 35.80 64.61 70.14 87.53 120.61 27.37 44.52 48.66 34 ER6a ExonRegion 0 25.17 114.98 50.00 45.83 60.44 103.57 69.91 69.75 113.80 161.70 83.59 36.29 79.27 58.71 21.11 22.26 46.57 63.24 57.93 104.61 33.64 47.72 38.09 35 E6a_E7a KnownJunction 1 26.82 139.25 42.90 32.90 58.66 94.60 97.29 52.78 127.98 178.74 75.23 55.82 110.87 42.85 13.85 10.51 50.77 42.45 36.52 91.91 39.91 47.95 44.22 36 ER7a ExonRegion 1 21.90 99.42 40.76 49.66 63.81 74.76 85.65 57.34 99.37 146.50 64.92 43.14 51.18 54.55 16.52 27.70 53.22 64.39 49.90 86.91 39.59 42.03 44.28 37 E7a_E8a KnownJunction 0 34.67 131.49 53.58 58.20 89.22 78.48 117.61 56.68 90.28 166.62 49.17 54.02 53.41 67.63 21.14 30.33 57.88 62.14 37.27 99.65 40.77 25.11 69.40 38 ER8a ExonRegion 0 25.48 113.21 44.75 44.20 61.43 79.17 77.89 58.50 88.47 138.76 69.02 43.74 58.45 54.13 20.18 28.65 46.81 75.32 49.55 94.46 47.04 44.23 42.55 39 E8a_E9a KnownJunction 0 31.49 146.16 49.20 63.13 38.20 86.83 95.79 65.43 102.02 147.53 52.22 42.31 86.36 27.90 33.75 24.27 31.51 96.96 87.34 96.32 40.28 67.48 39.86 40 ER9a ExonRegion 0 49.17 147.62 54.60 54.85 86.65 110.51 109.38 60.41 103.46 155.42 67.21 39.77 68.93 50.17 26.42 22.94 51.87 66.10 72.44 78.95 46.01 68.78 54.25 41 E9a_E10a KnownJunction 0 23.04 252.52 62.15 50.54 128.86 132.48 124.94 68.92 125.03 145.62 61.86 33.61 52.59 31.31 47.59 27.77 64.52 81.12 60.52 102.65 73.89 72.50 53.44 42 ER10a ExonRegion 0 32.83 149.69 65.65 66.25 91.20 128.36 114.83 94.90 154.48 180.70 87.34 46.81 102.80 64.19 39.29 41.81 65.17 113.89 70.62 124.00 73.67 57.22 81.91 43 E10a_E11a KnownJunction 0 36.67 158.20 82.20 93.99 109.85 130.38 108.20 111.89 187.64 200.61 97.71 56.57 133.27 84.94 39.56 60.92 84.81 129.04 131.49 136.53 49.73 41.39 74.69 44 ER11a ExonRegion 0 55.75 119.47 92.34 96.26 105.80 125.36 108.11 121.44 198.53 212.20 96.68 59.36 135.92 79.65 51.18 58.55 67.11 152.81 119.90 152.55 77.50 63.01 86.66 45 E11a_E12a KnownJunction 0 42.90 115.37 93.76 94.33 72.67 126.46 86.12 112.50 206.10 208.72 82.49 37.06 80.84 35.26 10.51 35.46 42.08 108.28 98.73 133.71 68.51 72.01 68.03 46 ER12a ExonRegion 0 31.84 103.90 67.65 65.59 57.77 106.99 79.50 92.81 135.95 172.11 69.24 37.36 68.37 51.97 35.45 35.52 46.95 108.72 80.31 108.36 65.60 57.11 59.33 47 E12a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E12b_E13a KnownJunction 1 48.01 90.12 75.37 67.12 67.49 106.47 96.58 102.64 144.07 212.34 76.60 35.86 28.41 98.36 33.75 29.65 42.82 105.42 78.12 129.62 59.18 51.74 39.27 49 ER12b ExonRegion 1 38.10 79.31 68.62 62.69 48.16 99.03 79.44 91.61 128.45 204.15 77.32 25.98 32.83 79.58 26.11 20.80 36.31 120.10 73.26 104.25 55.09 47.92 46.99 50 ER13a ExonRegion 0 33.62 68.43 94.85 67.39 77.23 99.89 72.61 98.17 152.85 210.78 76.42 31.89 47.55 57.49 32.46 39.65 56.12 117.47 87.17 106.94 71.52 51.48 68.86 51 E13a_E14a KnownJunction 0 64.75 103.27 106.35 85.40 83.45 88.53 70.88 88.93 161.95 253.04 82.65 24.91 61.52 43.73 50.93 60.33 56.94 149.11 97.60 98.37 83.71 38.45 64.88 52 ER14a ExonRegion 0 50.77 111.12 88.10 71.26 64.19 106.23 76.01 85.61 142.09 213.60 82.74 20.10 52.18 53.69 42.15 39.56 66.70 115.35 66.49 89.31 75.69 53.93 46.18 53 E14a_E15a KnownJunction 0 38.60 157.54 104.73 96.56 63.16 105.85 85.81 89.38 167.71 215.81 81.23 31.96 55.19 38.67 68.98 53.49 61.06 115.86 49.22 104.57 86.24 55.48 47.04 54 E15_Aa NovelBoundary 0 10.30 0.00 1.83 5.63 4.07 13.74 6.18 15.12 9.32 8.19 2.68 13.80 0.00 0.00 0.00 0.00 4.11 8.79 4.80 2.81 3.15 0.00 0.00 55 ER15a ExonRegion 0 31.21 101.99 92.70 72.94 69.63 128.56 81.63 80.74 118.13 170.60 71.21 20.62 41.47 52.31 46.14 41.82 61.54 107.59 74.45 108.38 77.06 59.28 63.91 56 E15a_E16a KnownJunction 1 50.08 125.04 99.14 92.80 110.70 104.03 89.74 91.06 122.65 169.47 63.23 11.10 25.97 42.56 94.20 36.49 68.54 128.01 51.48 87.69 72.34 50.33 42.25 57 ER15b ExonRegion 1 37.39 102.36 91.22 89.95 92.16 92.10 76.20 78.74 111.85 165.03 67.22 9.62 34.91 42.77 60.93 41.28 70.05 129.96 53.80 108.98 71.50 58.80 39.81 58 ER16a ExonRegion 0 42.43 97.12 110.31 102.19 105.53 127.92 81.60 88.94 151.85 187.26 81.75 26.96 39.85 68.11 60.43 47.58 63.95 107.77 89.06 112.63 73.28 66.10 54.63 59 E16a_E17a KnownJunction 0 53.12 83.47 131.69 104.75 156.11 193.64 128.56 82.76 156.94 211.81 61.17 13.20 56.81 76.34 62.67 23.24 61.80 75.49 121.60 145.03 78.89 58.23 66.75 60 ER17a ExonRegion 0 68.02 119.31 137.28 110.54 105.87 147.28 114.41 129.18 181.27 227.90 79.34 30.55 69.56 59.56 50.46 57.83 67.10 134.09 93.80 132.46 76.62 73.97 66.91 61 E17a_E18a KnownJunction 0 53.79 117.02 166.88 127.39 81.15 134.18 120.39 146.18 216.26 251.29 127.24 25.96 98.53 81.88 47.84 49.05 81.35 117.98 78.50 138.89 69.93 50.70 52.75 62 ER18a ExonRegion 0 43.70 106.98 128.36 89.46 106.09 124.87 82.74 113.51 160.53 214.77 100.37 32.36 61.60 58.67 52.58 40.75 71.91 84.08 76.15 113.27 57.39 58.49 50.35 63 E18a_E19a KnownJunction 0 86.09 114.06 134.97 97.32 85.48 155.54 93.09 136.74 175.95 240.39 97.24 61.37 58.11 76.87 69.72 61.10 72.56 97.37 81.32 94.73 46.83 76.60 65.05 64 ER19a ExonRegion 0 84.52 145.14 146.15 132.47 165.56 159.92 131.23 154.83 194.88 225.39 91.68 37.19 75.91 62.87 60.39 62.69 67.27 101.99 100.72 113.22 52.30 70.10 67.67 65 E19a_E20a KnownJunction 0 89.50 184.18 130.30 160.69 173.43 158.20 148.87 161.42 183.97 171.08 58.44 69.62 60.39 43.20 71.45 63.23 64.80 107.90 91.86 120.36 77.90 57.31 42.17 66 ER20a ExonRegion 0 65.66 123.74 123.87 100.60 103.00 110.32 103.74 112.57 113.34 170.45 63.81 22.41 43.55 50.87 62.07 40.50 50.97 82.08 72.60 84.24 51.63 42.98 50.91 67 IG20 Intergenic 0 12.77 30.11 10.01 20.05 24.94 20.11 45.01 18.36 8.07 10.32 4.24 1.96 3.93 7.28 11.70 6.52 5.43 8.07 5.24 29.17 9.67 4.57 3.22 68 IG20_AR1 ActiveIntergenicRegion 0 2.82 12.99 4.70 9.99 8.92 12.84 23.02 9.70 7.07 4.01 1.93 0.00 0.78 0.54 5.16 4.29 2.93 2.46 2.83 7.56 7.71 2.32 0.00 69 IG20_SR1 SilentIntergenicRegion 0 15.36 34.65 11.44 22.76 29.18 22.15 50.94 20.72 8.40 11.98 4.86 2.46 4.75 9.02 13.45 7.15 6.11 9.54 5.90 34.82 10.27 5.18 4.05