Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC008105.1 Gene 0 95.28 3.77 13.35 9.50 59.93 67.34 21.48 114.02 31.90 103.98 9.19 13.41 19.00 17.40 15.77 25.39 21.25 2.72 3.92 2.82 9.93 15.04 15.11 2 500248 Transcript 0 110.19 1.82 11.63 8.02 57.86 66.56 18.57 103.80 31.27 95.45 9.85 6.30 8.66 14.09 12.57 22.97 19.77 1.96 3.51 1.78 9.22 15.90 13.38 3 498986 Transcript 0 192.61 242.08 185.05 279.54 194.79 142.64 201.47 165.28 101.16 183.65 18.99 157.97 287.66 51.76 48.24 109.08 58.61 69.33 53.96 121.56 71.72 26.18 72.48 4 ER1a ExonRegion 0 0.27 0.23 0.38 0.00 0.30 7.91 0.44 5.66 3.13 7.80 16.78 2.45 1.29 5.12 4.10 9.38 12.11 0.92 1.42 0.71 3.68 2.13 5.56 5 E1_Ab KnownBoundary 0 0.00 0.00 1.27 0.00 0.00 24.08 0.00 11.58 6.13 11.07 14.11 6.30 0.00 2.47 0.00 7.43 0.00 0.00 0.00 0.00 11.31 6.25 0.00 6 ER1b ExonRegion 0 20.36 0.32 6.90 1.20 9.15 33.50 8.16 53.20 18.60 72.38 4.99 3.02 2.00 14.48 10.36 15.39 21.56 1.20 2.11 2.53 11.32 13.06 8.78 7 E1_Da KnownBoundary 0 35.04 6.25 12.24 7.39 19.02 45.66 30.56 80.46 22.14 139.76 1.95 0.00 0.00 33.26 21.14 23.58 36.19 2.57 4.80 2.94 25.21 13.72 4.01 8 E1a_E1c KnownJunction 0 9.78 0.00 0.00 0.00 0.00 0.00 0.00 9.04 1.79 0.00 0.00 0.00 5.68 2.12 0.00 3.85 4.77 0.00 0.00 0.00 0.00 2.76 0.00 9 E1a_E1d NovelJunction 0 0.00 0.00 7.10 4.73 11.54 25.21 5.74 31.46 13.17 18.10 2.47 0.00 0.00 4.24 9.27 0.00 8.88 0.00 0.00 0.00 2.29 0.00 0.00 10 ER1c ExonRegion 0 104.21 3.42 11.12 11.76 54.19 94.74 23.34 121.22 38.12 147.97 10.09 1.41 4.10 25.01 17.69 27.73 22.89 2.34 3.53 2.47 10.83 17.89 19.35 11 E1_Ac KnownBoundary 0 330.65 14.41 16.23 22.87 175.81 144.46 57.90 258.36 75.87 248.85 26.06 35.41 0.00 40.14 38.20 50.07 77.23 11.73 19.01 3.26 23.29 58.36 37.65 12 ER1d ExonRegion 0 238.57 6.85 18.67 19.97 150.13 141.12 49.16 291.17 78.00 260.75 23.11 19.20 30.38 32.59 14.19 56.21 56.62 7.59 10.53 3.65 24.77 39.09 44.50 13 E1_Db KnownBoundary 0 272.12 5.79 20.99 10.39 179.71 129.75 62.67 264.60 68.37 224.03 10.06 5.25 19.15 16.36 8.90 51.87 30.01 4.48 3.67 6.01 11.61 25.41 27.66 14 E1b_E1d KnownJunction 0 10.30 5.53 0.00 0.00 3.99 8.63 0.00 18.15 5.03 1.64 0.00 0.00 0.00 0.00 0.00 4.36 3.83 0.00 0.00 0.00 0.00 2.39 0.00 15 ER1e ExonRegion 0 252.97 2.15 19.93 22.82 140.57 137.76 47.07 252.78 65.59 235.14 12.86 16.22 15.42 27.23 24.74 57.17 38.45 5.70 6.06 4.94 22.06 37.10 33.01 16 E1_Ad KnownBoundary 0 349.77 6.45 13.01 12.49 204.92 190.57 75.74 237.00 64.35 186.93 7.58 5.55 0.00 33.02 22.37 41.36 56.10 9.00 4.71 0.00 11.55 51.62 19.89 17 ER1f ExonRegion 0 305.04 3.76 36.44 16.11 184.05 141.96 44.52 245.66 69.09 216.45 17.98 15.69 10.62 36.62 38.57 70.82 54.78 8.26 4.40 4.08 21.16 43.04 33.76 18 E1_Dc NovelBoundary 0 16.37 0.00 27.26 10.49 19.86 61.90 6.18 75.08 18.14 72.63 2.68 6.30 6.17 14.01 13.35 11.79 23.00 3.94 0.00 0.00 0.00 10.72 3.16 19 E1c_E2a KnownJunction 0 93.05 0.00 6.59 0.00 43.72 42.25 5.39 52.00 20.51 24.04 2.68 5.55 15.58 4.94 4.70 3.93 16.18 0.00 4.42 0.00 3.03 10.65 0.00 20 E1c_E3a KnownJunction 0 134.39 0.00 12.03 10.89 103.57 71.55 17.49 110.49 18.92 109.30 7.79 11.85 13.64 20.72 27.20 23.07 20.66 0.00 0.00 0.00 9.33 3.12 7.77 21 E2_Aa NovelBoundary 0 13.34 0.00 8.84 3.26 37.44 15.28 14.04 55.90 28.41 29.33 0.00 0.00 8.12 6.95 4.45 4.02 0.00 1.53 7.91 0.00 3.15 2.63 11.35 22 ER2a ExonRegion 0 100.46 3.30 20.14 5.49 50.53 50.13 16.59 87.36 28.98 62.32 6.84 5.87 6.93 8.13 11.61 16.62 9.24 0.83 2.12 0.77 6.49 11.71 9.00 23 E2_Da NovelBoundary 0 146.25 3.29 26.76 4.66 79.63 87.79 37.58 120.39 38.28 70.59 6.42 13.20 12.66 7.36 0.00 15.72 8.79 0.00 0.00 6.20 5.50 8.08 0.00 24 I2 Intron 0 26.68 0.00 0.00 2.33 39.87 13.66 11.38 28.04 4.22 17.62 2.22 4.09 2.21 1.53 3.52 5.11 5.67 0.00 0.00 0.00 0.00 1.19 6.73 25 I2_AR1 ActiveIntronRegion 0 15.96 0.00 0.00 2.26 34.02 13.67 10.33 22.72 3.63 15.07 1.99 0.00 0.40 0.97 0.41 5.94 6.41 0.00 0.00 0.00 0.00 2.08 7.38 26 I2_SR1 SilentIntronRegion 0 34.26 0.00 0.00 2.42 44.38 13.91 12.22 32.06 4.68 19.63 2.37 6.86 3.45 1.93 5.64 4.65 5.29 0.00 0.00 0.00 0.00 0.59 6.43 27 E3_Aa NovelBoundary 0 28.45 0.00 7.54 9.26 114.52 126.69 26.41 101.41 24.36 81.10 2.53 5.85 12.66 7.24 5.07 7.60 12.25 4.02 4.80 3.00 11.43 3.12 3.59 28 ER3a ExonRegion 1 99.17 12.52 14.27 12.87 96.74 83.92 32.52 145.05 32.97 121.49 7.98 41.10 71.85 30.63 30.23 30.48 26.51 5.08 7.43 5.39 9.30 10.59 19.40 29 E3_Da NovelBoundary 1 737.02 499.19 1198.54 1021.58 634.89 337.87 472.54 981.09 997.50 863.42 281.91 185.46 249.17 119.90 269.86 499.19 440.02 1010.22 491.78 530.90 270.09 155.96 595.83 30 E3a_E4a KnownJunction 1 868.89 1429.42 1070.51 1644.65 933.02 650.31 1143.42 625.97 525.78 821.44 95.97 873.73 1602.17 249.46 223.38 584.46 289.20 409.85 312.29 721.50 408.60 134.04 402.49 31 I3 Intron 0 30.20 1.56 3.83 2.84 32.01 29.38 13.25 28.11 8.11 22.24 0.95 2.55 2.97 3.90 1.97 7.90 4.85 0.71 0.67 1.79 1.23 3.50 4.31 32 I3_SR1 SilentIntronRegion 0 30.20 1.56 3.83 2.84 32.01 29.38 13.25 28.11 8.11 22.24 0.95 2.55 2.97 3.90 1.97 7.90 4.85 0.71 0.67 1.79 1.23 3.50 4.31 33 E4_Aa NovelBoundary 0 1821.58 1830.00 2760.58 2675.98 1568.17 1217.08 1853.77 2610.34 2788.86 2278.38 568.57 422.09 349.81 210.96 426.48 1738.52 1272.93 3584.64 1345.07 2026.69 771.91 592.62 1558.47 34 ER4a ExonRegion 0 33.11 5.03 13.48 8.85 31.40 41.43 15.40 82.99 22.44 48.02 2.19 21.13 32.65 7.64 8.62 8.24 6.70 1.07 4.07 2.50 3.09 4.19 5.21 35 IG27_SR5 SilentIntergenicRegion 0 7.20 0.98 3.02 0.98 11.51 11.26 4.30 22.86 8.81 14.86 0.23 0.83 1.73 0.96 0.73 3.49 1.49 0.55 0.77 0.77 0.20 0.75 1.41 36 IG27_AR5 ActiveIntergenicRegion 0 15.03 2.19 5.11 2.19 5.18 7.50 7.98 31.04 11.09 12.14 0.00 1.53 2.49 0.64 2.13 3.84 0.71 1.19 0.00 1.83 0.95 1.79 0.63 37 IG27_AR4 ActiveIntergenicRegion 0 5.82 0.75 2.86 0.00 5.65 4.31 1.52 22.06 8.42 12.22 0.72 0.00 2.15 0.67 0.54 2.19 0.00 0.00 0.00 0.79 0.00 1.93 1.09