Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NME1 Gene 0 137.02 445.82 654.91 218.80 109.21 104.37 134.30 164.84 95.05 233.67 297.13 107.57 84.01 297.46 520.19 207.61 243.09 174.12 171.98 362.83 131.00 106.55 62.72 2 393196 Transcript 0 8.65 49.17 30.87 24.58 21.27 19.03 30.69 20.31 10.93 11.73 13.26 7.56 3.52 12.34 18.44 7.65 7.50 10.51 11.90 45.62 7.52 7.27 6.73 3 487481 Transcript 0 6.70 24.34 29.31 17.51 10.73 4.86 18.66 17.07 6.78 14.13 4.94 15.06 18.23 11.58 20.77 13.83 12.06 12.31 11.09 19.25 5.22 1.98 4.30 4 336097 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 480143 Transcript 0 7.06 41.86 44.69 30.64 20.87 11.92 24.24 19.67 5.69 10.08 9.75 6.76 3.81 6.77 9.41 15.95 8.29 13.90 11.50 33.87 4.67 3.09 4.37 6 475573 Transcript 0 14.79 25.61 37.43 13.20 8.96 11.04 29.95 9.55 5.95 12.32 12.31 2.51 3.57 13.86 24.05 10.35 10.06 9.35 4.50 23.31 4.18 3.69 4.62 7 13034 Transcript 0 0.90 6.91 1.28 0.00 3.39 1.56 1.68 2.71 0.65 0.05 1.58 0.00 0.00 0.00 1.74 0.00 1.40 5.38 2.71 1.81 0.94 0.00 1.25 8 456492 Transcript 0 1.05 17.46 6.13 7.47 3.60 8.20 11.06 4.95 4.38 1.95 3.64 2.07 0.82 5.27 11.92 7.92 7.47 6.22 3.47 12.33 2.48 0.84 2.47 9 465188 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 311032 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ER1a ExonRegion 0 4.40 25.83 8.98 1.44 4.77 12.49 17.71 0.05 2.47 2.45 8.78 1.29 0.00 9.74 18.11 5.38 3.57 4.00 7.92 17.88 11.79 8.39 2.78 12 E1_Ab KnownBoundary 0 0.00 2.89 1.45 1.63 0.00 2.90 10.33 3.45 1.19 4.27 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 8.90 5.94 0.00 13 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ad KnownBoundary 0 3.78 6.12 3.08 0.00 8.15 16.92 10.78 0.00 1.74 2.36 5.37 0.00 0.00 0.00 0.00 0.00 0.00 2.03 4.52 3.26 0.00 0.00 0.00 15 E1_Ae KnownBoundary 1 627.22 2288.54 621.12 236.00 440.83 689.60 963.23 169.27 89.81 285.17 716.18 12.60 0.00 776.86 1164.85 621.55 381.02 588.93 527.36 968.54 503.61 295.70 397.79 16 ER1b ExonRegion 1 56.09 253.69 68.01 18.40 50.84 97.19 129.75 5.19 9.26 33.26 100.51 10.82 0.00 77.15 163.92 57.96 56.12 30.49 56.54 152.66 64.46 54.69 52.86 17 ER1c ExonRegion 1 113.23 482.98 118.25 30.66 82.95 150.37 219.12 11.23 11.73 56.20 193.29 12.99 0.00 178.65 308.98 141.18 108.93 46.19 124.23 253.19 126.71 95.84 102.78 18 ER1d ExonRegion 1 299.21 1171.45 250.75 74.24 189.98 346.39 492.44 31.57 33.74 117.29 399.50 12.99 0.00 474.33 716.00 315.51 216.30 83.63 284.84 532.02 324.99 184.99 204.33 19 ER1e ExonRegion 1 718.64 2012.81 256.42 77.83 114.93 232.75 337.59 35.37 37.55 124.10 242.59 3.46 2.16 224.85 273.83 193.97 149.61 65.33 175.05 299.80 193.28 101.23 114.71 20 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER2a ExonRegion 0 1.80 13.83 1.23 0.00 6.78 3.12 3.35 1.73 0.00 0.10 0.58 0.00 0.00 0.00 3.48 0.00 2.81 5.17 5.42 3.62 1.87 0.00 2.50 23 E2a_E3b KnownJunction 0 0.00 0.00 1.33 0.00 0.00 0.00 0.00 3.70 1.30 0.00 2.58 0.00 0.00 0.00 0.00 0.00 0.00 5.60 0.00 0.00 0.00 0.00 0.00 24 ER3a ExonRegion 0 1.05 17.46 6.13 7.47 3.60 8.20 11.06 4.95 4.38 1.95 3.64 2.07 0.82 5.27 11.92 7.92 7.47 6.22 3.47 12.33 2.48 0.84 2.47 25 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3b ExonRegion 0 0.94 9.48 10.55 6.97 2.70 4.32 3.16 7.52 5.41 3.55 20.07 4.79 2.68 11.24 8.16 4.43 13.09 9.30 5.57 12.58 4.09 1.88 0.94 27 E3_Ac KnownBoundary 0 0.00 9.47 13.69 10.75 0.00 7.61 7.38 7.19 2.98 4.30 35.48 17.41 0.00 45.85 33.62 0.00 35.16 0.00 14.12 17.90 12.29 5.39 4.01 28 ER3c ExonRegion 0 4.23 10.94 12.98 8.51 0.58 2.23 2.18 8.74 4.27 5.73 20.11 2.34 0.00 22.47 37.79 3.86 32.38 8.99 23.76 16.79 5.24 1.63 1.19 29 E3_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER3d ExonRegion 0 1.75 23.71 6.35 6.52 4.36 6.08 5.05 3.90 2.56 1.65 0.88 2.41 2.55 7.87 14.84 6.62 3.25 15.57 8.15 6.29 0.03 0.00 0.00 31 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER4a ExonRegion 1 274.84 818.02 159.07 47.40 53.20 145.85 193.09 22.23 18.89 74.41 198.56 5.00 5.38 94.09 107.19 43.95 115.35 34.16 64.64 193.85 176.74 48.38 30.20 33 E4_Da KnownBoundary 0 359.77 590.62 351.82 135.48 107.98 159.62 277.30 66.50 29.83 124.18 188.63 45.91 61.68 337.34 428.21 190.98 119.78 95.43 302.31 348.73 63.63 220.99 151.69 34 E4_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER4b ExonRegion 1 326.85 625.37 474.63 177.11 124.10 185.74 257.29 99.26 50.23 135.72 54.86 84.32 124.40 420.49 671.71 387.93 28.61 224.99 332.34 384.09 24.03 210.63 202.77 37 ER4c ExonRegion 0 4.20 27.05 27.96 17.50 8.12 7.13 12.03 11.66 4.93 11.79 6.96 9.71 10.32 6.76 14.14 13.63 3.77 9.42 10.45 17.81 4.59 1.26 1.66 38 E4_Dc KnownBoundary 0 0.00 23.29 29.86 26.30 0.00 2.10 15.94 12.45 7.99 11.68 0.00 12.60 6.33 7.36 0.00 16.49 7.67 13.10 20.71 7.73 2.90 0.00 0.00 39 ER4d ExonRegion 1 6.70 24.34 29.31 17.51 10.73 4.86 18.66 17.07 6.78 14.13 4.94 15.06 18.23 11.58 20.77 13.83 12.06 12.31 11.09 19.25 5.22 1.98 4.30 40 E4_Dd NovelBoundary 0 105.87 104.85 283.58 273.39 97.20 30.66 88.37 281.77 197.22 236.98 40.27 26.71 0.00 27.72 48.09 122.36 60.21 285.53 56.28 99.33 49.42 29.76 79.99 41 ER5a ExonRegion 0 352.46 745.23 1372.09 408.34 189.06 298.82 375.95 324.17 193.85 409.73 272.92 225.60 131.55 990.03 1511.47 486.96 314.75 430.05 315.29 904.84 150.33 261.46 165.06 42 E5a_E6a KnownJunction 0 9.85 2.63 18.86 5.16 3.65 7.44 25.22 1.85 3.36 6.45 7.11 0.00 0.00 0.00 10.38 4.10 0.00 6.80 0.00 8.76 0.00 0.00 4.35 43 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER6a ExonRegion 0 19.72 48.58 56.00 21.24 14.27 14.64 34.68 17.26 8.55 18.19 17.52 5.02 7.15 27.71 37.72 16.61 20.12 11.91 9.00 37.86 8.36 7.38 4.89 45 E6_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER6b ExonRegion 0 402.08 2427.09 2773.46 788.27 406.71 542.13 693.44 745.78 444.35 1108.64 1237.42 336.42 241.45 1284.08 2049.32 691.10 963.95 763.48 471.58 1607.08 552.54 399.66 201.68 47 E6_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E6a_E7a KnownJunction 0 1200.66 4352.45 4947.40 1341.15 1415.20 920.10 984.70 1239.57 696.06 1835.45 2473.99 747.24 414.58 2648.55 4214.98 1048.78 1835.62 1071.11 860.07 3021.62 1021.67 628.32 276.32 49 ER6c ExonRegion 0 7.06 41.86 44.69 30.64 20.87 11.92 24.24 19.67 5.69 10.08 9.75 6.76 3.81 6.77 9.41 15.95 8.29 13.90 11.50 33.87 4.67 3.09 4.37 50 E7_Aa NovelBoundary 0 24.45 44.53 52.90 35.83 45.76 37.59 40.50 20.45 13.34 10.31 20.58 0.00 6.82 12.01 13.35 0.00 16.92 28.48 17.79 50.30 2.66 11.82 3.16 51 ER7a ExonRegion 0 481.82 1401.71 4278.38 1348.87 496.70 318.75 366.44 1057.16 609.40 1602.00 2185.07 674.36 508.25 1910.18 3410.43 1275.67 1744.88 1050.47 1101.04 2289.42 870.84 727.53 341.89 52 E7_Da KnownBoundary 1 379.10 813.61 3527.64 889.66 380.73 229.19 322.30 985.90 562.78 1442.73 1998.98 610.55 520.91 1449.77 2365.67 637.01 1709.30 453.04 676.16 2073.09 830.91 570.15 155.19 53 ER7b ExonRegion 0 629.78 1733.10 2852.75 1083.05 635.06 454.00 530.45 643.05 368.70 848.71 1141.65 587.60 503.03 920.78 1997.00 970.32 1010.17 737.86 858.13 1146.52 446.79 377.09 265.29 54 E7_Db KnownBoundary 0 55.86 238.38 141.21 73.42 99.92 74.05 98.13 72.58 46.35 76.56 75.02 35.26 30.36 103.24 106.56 44.77 65.36 29.47 32.85 102.08 29.59 26.82 20.83 55 E7_Dc KnownBoundary 0 0.00 55.12 19.72 10.19 8.40 8.01 8.88 12.73 1.79 0.00 0.00 6.90 0.00 0.00 6.30 3.76 4.77 1.87 0.00 21.60 3.15 5.88 0.00 56 E7_Dd KnownBoundary 0 3.48 63.61 66.38 63.93 24.19 22.32 44.25 52.33 27.95 28.34 19.69 21.01 19.32 9.89 25.71 3.85 12.44 12.73 4.14 90.70 2.47 3.12 14.43 57 ER7c ExonRegion 0 197.37 449.42 361.18 168.66 169.24 159.54 141.99 99.39 73.49 97.49 209.24 119.06 144.22 218.04 483.06 147.86 154.32 102.55 81.23 246.81 87.05 36.98 44.05 58 ER7d ExonRegion 0 14.82 118.57 107.97 72.55 41.68 34.98 50.31 68.01 36.63 41.55 36.13 20.32 19.30 36.42 65.28 14.63 18.03 26.01 15.31 105.32 11.61 12.26 13.10 59 ER7e ExonRegion 0 12.90 72.51 52.76 47.73 37.76 25.56 43.66 40.58 19.38 21.00 17.74 13.83 7.04 14.94 18.77 9.91 11.43 17.02 15.88 73.36 3.26 6.14 10.67