Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LRRC37A Gene 0 20.29 24.60 52.19 35.17 48.12 36.80 62.51 57.53 35.08 56.06 10.40 24.51 25.32 11.70 15.31 44.11 39.42 40.09 24.47 35.38 8.86 5.81 11.25 2 496930 Transcript 0 47.97 54.77 57.77 59.19 99.76 61.63 143.14 74.91 59.52 72.21 8.44 62.93 41.10 21.84 29.50 52.81 49.87 44.33 56.74 60.87 16.15 11.46 21.26 3 393466 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 393465 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 320254 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 376866 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 450558 Transcript 0 40.72 54.77 240.65 139.88 134.90 146.42 159.14 260.87 104.98 245.86 14.52 63.99 67.58 29.00 39.49 87.95 102.66 121.01 58.33 93.43 21.92 12.06 23.39 8 IG43 Intergenic 0 0.08 0.18 7.25 0.58 6.58 7.05 109.18 6.92 57.00 5.36 1.55 2.36 3.85 0.17 0.26 5.61 4.17 78.33 36.48 0.64 15.38 0.04 51.87 9 IG43_SR1 SilentIntergenicRegion 0 0.08 0.18 7.26 0.58 6.58 7.06 109.26 6.93 57.03 5.36 1.55 2.36 3.85 0.17 0.26 5.62 4.18 78.39 36.50 0.65 15.39 0.04 51.91 10 ER1a ExonRegion 0 82.46 106.84 104.48 104.92 182.19 87.36 252.53 108.54 103.84 123.55 16.88 59.70 68.57 29.61 58.99 62.13 56.17 73.35 83.83 104.11 26.75 20.16 42.51 11 E1_Ab KnownBoundary 0 74.01 138.59 111.32 120.33 102.12 29.30 272.40 169.59 178.79 171.76 15.95 74.72 53.73 19.66 28.80 37.17 71.06 78.02 73.23 72.55 25.58 27.56 34.74 12 ER1b ExonRegion 0 41.26 70.46 68.13 78.77 102.24 70.89 187.47 127.39 122.32 133.70 25.06 87.07 83.80 27.78 34.21 91.01 69.06 86.59 85.14 81.80 29.43 18.74 40.48 13 E1_Ac KnownBoundary 0 59.20 77.88 123.33 170.11 163.75 94.60 305.08 179.08 186.63 154.48 39.22 57.77 46.59 37.44 106.81 213.11 157.08 307.54 214.12 189.58 73.95 37.17 134.45 14 ER1c ExonRegion 0 49.54 42.94 53.30 53.60 74.19 59.68 116.30 99.50 128.97 141.21 32.99 83.18 89.07 57.49 59.24 116.35 108.03 232.03 134.56 153.96 53.23 37.24 52.52 15 E1_Da NovelBoundary 0 95.57 89.72 192.63 140.77 162.39 132.88 242.63 146.72 240.80 121.36 49.49 13.05 27.76 14.54 50.68 137.06 143.43 167.55 193.70 188.81 124.79 56.15 112.42 16 E1a_E2a KnownJunction 0 10.08 3.35 35.24 21.68 16.55 35.55 31.13 44.69 68.58 70.08 16.16 18.61 6.33 70.46 40.42 57.08 23.09 82.41 38.97 107.19 44.73 8.76 20.15 17 E1a_E3a KnownJunction 1 13.48 2.70 11.06 13.45 17.32 35.89 33.74 41.28 15.19 20.87 0.00 66.17 13.64 14.07 0.00 43.49 43.57 15.30 29.65 17.64 5.56 2.76 0.00 18 I1 Intron 0 58.36 47.82 137.10 137.85 116.72 108.41 221.62 143.75 139.70 174.02 23.54 37.08 48.10 31.25 58.79 113.48 70.63 187.87 125.73 160.90 75.98 20.94 72.58 19 I1_AR1 ActiveIntronRegion 0 58.47 47.91 137.35 138.10 116.93 108.60 222.01 144.00 139.95 174.33 23.58 37.15 48.18 31.30 58.89 113.68 70.76 188.20 125.95 161.19 76.12 20.98 72.71 20 E2_Aa NovelBoundary 0 22.08 44.40 88.38 119.67 65.37 39.18 132.05 115.87 120.83 149.06 16.85 17.86 39.45 41.44 30.66 60.41 46.47 128.92 94.78 154.94 74.75 19.84 42.43 21 ER2a ExonRegion 0 5.79 7.05 24.63 18.67 17.68 21.28 13.41 41.32 16.64 35.05 16.74 14.29 19.89 20.99 14.92 54.59 36.88 35.94 19.46 66.02 10.46 2.16 3.77 22 E2_Ab KnownBoundary 0 17.26 9.41 132.37 74.02 19.95 44.18 50.21 150.25 169.10 226.98 37.85 5.25 47.40 39.03 20.89 135.09 88.36 348.33 142.50 179.29 46.02 38.21 37.05 23 ER2b ExonRegion 0 1.18 0.89 5.11 4.18 1.25 2.59 2.08 6.36 5.25 10.12 2.05 0.90 1.51 2.59 1.05 5.44 3.70 12.48 0.86 6.60 0.91 0.27 0.69 24 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3a ExonRegion 0 27.28 18.58 48.74 44.69 40.28 42.25 56.65 67.58 41.93 63.67 39.57 31.33 58.69 37.87 20.27 47.93 38.24 38.37 15.31 78.63 4.56 14.18 0.00 26 E3a_E4a KnownJunction 0 17.48 15.06 27.44 27.10 16.47 21.35 24.86 28.42 9.09 47.33 61.54 19.66 15.10 59.04 17.92 44.77 23.00 52.15 4.80 76.96 3.15 17.51 0.00 27 E3a_E9b NovelJunction 0 0.00 3.35 3.25 3.86 20.63 14.54 6.45 8.34 5.90 22.16 5.11 22.06 27.27 17.42 14.96 18.20 24.96 16.62 23.81 31.13 0.00 3.12 0.00 28 Ix_AR1 ActiveIntronRegion 0 8.16 11.66 15.27 17.35 10.78 5.12 42.99 25.94 6.15 10.46 2.77 3.81 8.79 0.98 5.60 6.51 9.65 2.62 1.85 9.49 2.36 0.74 3.14 29 ER4a ExonRegion 0 4.79 4.94 11.39 15.62 5.05 5.65 4.28 22.83 6.43 30.33 18.36 8.78 4.43 17.44 6.04 27.78 19.58 31.28 5.09 28.13 4.13 4.46 0.00 30 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5a ExonRegion 0 0.00 0.00 6.35 15.28 1.41 1.20 3.05 9.79 3.07 10.07 7.22 19.18 14.79 9.14 2.34 7.72 4.68 0.44 5.49 12.68 0.00 8.42 0.00 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6a ExonRegion 0 3.03 0.00 4.66 2.88 6.94 9.69 10.59 2.11 0.00 2.19 1.62 6.73 9.26 5.71 5.05 6.93 0.00 2.51 3.74 3.07 0.00 3.16 0.00 34 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 Ix Intron 0 3.15 3.20 11.99 20.62 6.64 5.56 9.86 8.74 2.18 22.06 1.01 2.37 2.47 2.10 3.24 5.41 3.46 8.16 5.54 11.85 1.15 0.86 0.00 36 Ix_SR1 SilentIntronRegion 0 3.17 3.22 12.06 20.74 6.68 5.60 9.92 8.79 2.20 22.19 1.02 2.38 2.49 2.12 3.26 5.44 3.48 8.21 5.57 11.93 1.16 0.87 0.00 37 E7_Aa NovelBoundary 1 0.00 0.00 23.89 0.00 60.61 8.29 0.00 44.73 0.00 0.00 5.26 6.30 81.49 0.00 0.00 3.25 31.51 0.00 0.00 0.00 0.00 0.00 0.00 38 ER7a ExonRegion 0 3.56 0.00 0.77 0.62 1.67 4.79 6.99 0.00 2.92 0.05 0.94 7.58 0.00 0.00 1.45 2.23 0.00 0.00 0.00 0.00 0.00 0.00 0.53 39 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 Ix_AR2 ActiveIntronRegion 0 0.57 4.75 1.24 0.00 23.65 54.49 80.51 0.56 0.00 1.94 1.33 0.00 0.00 0.00 0.00 0.00 4.55 0.00 0.00 1.47 0.00 0.00 0.00 41 ER8a ExonRegion 0 0.51 0.00 0.51 0.78 0.00 0.00 2.70 0.00 3.28 2.20 1.73 4.50 0.00 0.00 1.39 0.00 0.00 1.75 0.00 0.00 0.00 0.00 1.49 42 E8a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 Ix_SR1 SilentIntronRegion 0 2.96 17.05 0.00 0.00 14.95 34.59 39.65 0.00 0.00 0.00 4.02 34.34 56.15 12.66 25.12 20.72 6.87 3.87 4.45 13.35 1.54 2.91 2.05 44 E9_Aa NovelBoundary 1 217.74 157.41 357.59 194.05 349.41 335.89 511.40 341.69 160.18 400.03 17.37 261.99 255.50 23.66 84.31 77.16 104.53 48.29 79.91 105.78 3.15 11.70 32.69 45 ER9a ExonRegion 1 40.72 54.77 240.65 139.88 134.90 146.42 159.14 260.87 104.98 245.86 14.52 63.99 67.58 29.00 39.49 87.95 102.66 121.01 58.33 93.43 21.92 12.06 23.39 46 E9_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER9b ExonRegion 0 50.13 66.04 181.16 107.92 73.13 100.58 122.15 150.60 97.57 191.98 14.25 47.95 53.50 35.52 31.91 49.17 87.84 78.58 54.75 88.71 33.49 10.88 26.68 48 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER10a ExonRegion 0 9.13 6.69 44.30 12.21 22.11 31.04 25.59 40.27 16.78 28.52 14.73 23.36 16.56 3.40 2.25 84.60 67.92 35.84 10.61 6.99 3.01 2.36 5.18 50 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER11a ExonRegion 1 17.40 2.63 17.09 0.00 7.47 3.48 0.20 24.81 0.00 0.63 0.44 2.47 6.21 0.00 0.00 22.84 3.74 0.00 0.00 0.00 0.00 0.00 0.00 52 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 Ix Intron 0 11.03 10.97 56.48 21.04 29.29 49.42 65.40 34.31 22.98 69.04 17.28 35.37 23.30 11.65 9.27 69.65 80.41 48.87 26.13 27.03 8.22 3.66 12.59 54 Ix_AR1 ActiveIntronRegion 0 15.23 15.44 80.15 29.68 41.34 70.27 91.76 48.50 32.39 97.82 21.80 41.20 26.70 16.52 13.19 85.57 106.21 69.12 36.35 38.29 11.70 5.12 17.92 55 ER12a ExonRegion 1 4.70 0.00 18.85 0.00 0.00 0.00 0.00 31.73 0.00 0.00 4.83 2.08 6.75 0.00 0.00 7.43 28.32 0.00 0.00 0.00 0.00 0.00 0.00 56 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E12a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 Ix_AR2 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 16.96 14.56 1.66 0.00 0.00 14.66 3.79 0.00 0.74 0.00 2.97 0.00 0.00 0.00 2.13 0.00 0.00 3.55 59 Ix_AR3 ActiveIntronRegion 0 0.62 0.00 1.65 2.41 0.00 2.43 3.02 4.18 0.80 3.53 14.04 30.88 26.31 4.05 1.51 1.79 5.35 1.24 1.24 3.60 0.00 0.00 1.51 60 ER13a ExonRegion 0 0.00 0.00 16.49 0.00 2.24 0.00 0.00 29.98 0.00 0.04 2.28 4.01 0.68 0.00 0.00 5.73 7.68 0.00 0.00 0.00 0.00 0.00 0.00 61 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER14a ExonRegion 0 0.00 0.00 35.30 0.00 66.38 20.03 0.48 71.01 0.00 0.61 17.48 40.54 37.19 0.00 0.00 38.64 51.97 0.00 0.00 0.00 0.00 0.00 0.00 63 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER15a ExonRegion 0 0.00 0.00 10.18 0.00 7.56 4.36 0.00 23.51 0.00 0.00 2.85 7.40 8.06 0.00 0.00 13.65 23.68 0.00 0.00 0.00 0.00 0.00 0.00 65 ER15b ExonRegion 0 0.00 0.00 0.98 0.00 2.68 1.22 0.00 4.15 0.00 0.00 0.00 8.66 0.00 0.00 0.00 6.54 0.44 0.00 0.00 0.00 0.00 0.00 0.00 66 ER15c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00